BLASTX 7.6.2
Query= UN09257 /QuerySize=1023
(1022 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q3ZCA2|CPSF5_BOVIN Cleavage and polyadenylation specificity f... 250 2e-065
sp|O43809|CPSF5_HUMAN Cleavage and polyadenylation specificity f... 250 2e-065
sp|Q9CQF3|CPSF5_MOUSE Cleavage and polyadenylation specificity f... 250 2e-065
sp|Q5RAI8|CPSF5_PONAB Cleavage and polyadenylation specificity f... 250 2e-065
sp|Q4KM65|CPSF5_RAT Cleavage and polyadenylation specificity fac... 250 2e-065
sp|Q7T3C6|CPSF5_DANRE Cleavage and polyadenylation specificity f... 249 3e-065
sp|Q6DJE4|CPSF5_XENLA Cleavage and polyadenylation specificity f... 248 4e-065
sp|Q55E68|CPSF5_DICDI Cleavage and polyadenylation specificity f... 215 5e-055
>sp|Q3ZCA2|CPSF5_BOVIN Cleavage and polyadenylation specificity factor subunit 5
OS=Bos taurus GN=NUDT21 PE=2 SV=1
Length = 227
Score = 250 bits (636), Expect = 2e-065
Identities = 115/195 (58%), Positives = 145/195 (74%), Gaps = 1/195 (0%)
Frame = +2
Query: 119 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVDAILLVQEHN 298
+ + + +N YPL+NY+FGTKEP EKD+SVA R RM+ + K GMR +V+ +L+V EH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 299 HPHILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLTSKLGGNSAGLVPDWKVGECVATWW 478
PH+LLLQ+G TF KLPGG L PGE+EVEGLKR +T L G G++ DW + +C+ WW
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEIL-GRQDGVLQDWVIDDCIGNWW 149
Query: 479 RPNFETMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG 658
RPNFE YPY P HITKPKE K+L++V L EK FAVPKN KL+A PLFELYDN YG
Sbjct: 150 RPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYG 209
Query: 659 PVISTIPQQLSRFHF 703
P+IS++PQ LSRF+F
Sbjct: 210 PIISSLPQLLSRFNF 224
>sp|O43809|CPSF5_HUMAN Cleavage and polyadenylation specificity factor subunit 5
OS=Homo sapiens GN=NUDT21 PE=1 SV=1
Length = 227
Score = 250 bits (636), Expect = 2e-065
Identities = 115/195 (58%), Positives = 145/195 (74%), Gaps = 1/195 (0%)
Frame = +2
Query: 119 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVDAILLVQEHN 298
+ + + +N YPL+NY+FGTKEP EKD+SVA R RM+ + K GMR +V+ +L+V EH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 299 HPHILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLTSKLGGNSAGLVPDWKVGECVATWW 478
PH+LLLQ+G TF KLPGG L PGE+EVEGLKR +T L G G++ DW + +C+ WW
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEIL-GRQDGVLQDWVIDDCIGNWW 149
Query: 479 RPNFETMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG 658
RPNFE YPY P HITKPKE K+L++V L EK FAVPKN KL+A PLFELYDN YG
Sbjct: 150 RPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYG 209
Query: 659 PVISTIPQQLSRFHF 703
P+IS++PQ LSRF+F
Sbjct: 210 PIISSLPQLLSRFNF 224
>sp|Q9CQF3|CPSF5_MOUSE Cleavage and polyadenylation specificity factor subunit 5
OS=Mus musculus GN=Nudt21 PE=2 SV=1
Length = 227
Score = 250 bits (636), Expect = 2e-065
Identities = 115/195 (58%), Positives = 145/195 (74%), Gaps = 1/195 (0%)
Frame = +2
Query: 119 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVDAILLVQEHN 298
+ + + +N YPL+NY+FGTKEP EKD+SVA R RM+ + K GMR +V+ +L+V EH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 299 HPHILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLTSKLGGNSAGLVPDWKVGECVATWW 478
PH+LLLQ+G TF KLPGG L PGE+EVEGLKR +T L G G++ DW + +C+ WW
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEIL-GRQDGVLQDWVIDDCIGNWW 149
Query: 479 RPNFETMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG 658
RPNFE YPY P HITKPKE K+L++V L EK FAVPKN KL+A PLFELYDN YG
Sbjct: 150 RPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYG 209
Query: 659 PVISTIPQQLSRFHF 703
P+IS++PQ LSRF+F
Sbjct: 210 PIISSLPQLLSRFNF 224
>sp|Q5RAI8|CPSF5_PONAB Cleavage and polyadenylation specificity factor subunit 5
OS=Pongo abelii GN=NUDT21 PE=2 SV=1
Length = 227
Score = 250 bits (636), Expect = 2e-065
Identities = 115/195 (58%), Positives = 145/195 (74%), Gaps = 1/195 (0%)
Frame = +2
Query: 119 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVDAILLVQEHN 298
+ + + +N YPL+NY+FGTKEP EKD+SVA R RM+ + K GMR +V+ +L+V EH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 299 HPHILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLTSKLGGNSAGLVPDWKVGECVATWW 478
PH+LLLQ+G TF KLPGG L PGE+EVEGLKR +T L G G++ DW + +C+ WW
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEIL-GRQDGVLQDWVIDDCIGNWW 149
Query: 479 RPNFETMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG 658
RPNFE YPY P HITKPKE K+L++V L EK FAVPKN KL+A PLFELYDN YG
Sbjct: 150 RPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYG 209
Query: 659 PVISTIPQQLSRFHF 703
P+IS++PQ LSRF+F
Sbjct: 210 PIISSLPQLLSRFNF 224
>sp|Q4KM65|CPSF5_RAT Cleavage and polyadenylation specificity factor subunit 5
OS=Rattus norvegicus GN=Nudt21 PE=2 SV=1
Length = 227
Score = 250 bits (636), Expect = 2e-065
Identities = 115/195 (58%), Positives = 145/195 (74%), Gaps = 1/195 (0%)
Frame = +2
Query: 119 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVDAILLVQEHN 298
+ + + +N YPL+NY+FGTKEP EKD+SVA R RM+ + K GMR +V+ +L+V EH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 299 HPHILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLTSKLGGNSAGLVPDWKVGECVATWW 478
PH+LLLQ+G TF KLPGG L PGE+EVEGLKR +T L G G++ DW + +C+ WW
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEIL-GRQDGVLQDWVIDDCIGNWW 149
Query: 479 RPNFETMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG 658
RPNFE YPY P HITKPKE K+L++V L EK FAVPKN KL+A PLFELYDN YG
Sbjct: 150 RPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYG 209
Query: 659 PVISTIPQQLSRFHF 703
P+IS++PQ LSRF+F
Sbjct: 210 PIISSLPQLLSRFNF 224
>sp|Q7T3C6|CPSF5_DANRE Cleavage and polyadenylation specificity factor subunit 5
OS=Danio rerio GN=cpsf5 PE=2 SV=1
Length = 228
Score = 249 bits (634), Expect = 3e-065
Identities = 115/195 (58%), Positives = 144/195 (73%), Gaps = 1/195 (0%)
Frame = +2
Query: 119 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVDAILLVQEHN 298
+ + + +N YPL+NY+FGTKEP EKD+SVA R RM+ + K GMR +V+ +L+V EH
Sbjct: 32 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRTVEGVLIVHEHR 91
Query: 299 HPHILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLTSKLGGNSAGLVPDWKVGECVATWW 478
PH+LLLQ+G TF KLPGG L PGE+EVEGLKR +T L G G+ DW + +C+ WW
Sbjct: 92 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEIL-GRQDGVKQDWVIDDCIGNWW 150
Query: 479 RPNFETMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG 658
RPNFE YPY P HITKPKE K+L++V L EK FAVPKN KL+A PLFELYDN YG
Sbjct: 151 RPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYG 210
Query: 659 PVISTIPQQLSRFHF 703
P+IS++PQ LSRF+F
Sbjct: 211 PIISSLPQLLSRFNF 225
>sp|Q6DJE4|CPSF5_XENLA Cleavage and polyadenylation specificity factor subunit 5
OS=Xenopus laevis GN=cpsf5 PE=2 SV=1
Length = 227
Score = 248 bits (633), Expect = 4e-065
Identities = 115/195 (58%), Positives = 144/195 (73%), Gaps = 1/195 (0%)
Frame = +2
Query: 119 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVDAILLVQEHN 298
+ + + +N YPL+NY+FGTKEP EKD+SVA R RM+ + K GMR +V+ +L+V EH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 299 HPHILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLTSKLGGNSAGLVPDWKVGECVATWW 478
PH+LLLQ+G TF KLPGG L PGE+EVEGLKR +T L G G+ DW + +C+ WW
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEIL-GRQDGVQQDWVIDDCIGNWW 149
Query: 479 RPNFETMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG 658
RPNFE YPY P HITKPKE K+L++V L EK FAVPKN KL+A PLFELYDN YG
Sbjct: 150 RPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYG 209
Query: 659 PVISTIPQQLSRFHF 703
P+IS++PQ LSRF+F
Sbjct: 210 PIISSLPQLLSRFNF 224
>sp|Q55E68|CPSF5_DICDI Cleavage and polyadenylation specificity factor subunit 5
OS=Dictyostelium discoideum GN=cpsf5 PE=3 SV=1
Length = 200
Score = 215 bits (546), Expect = 5e-055
Identities = 106/185 (57%), Positives = 139/185 (75%), Gaps = 5/185 (2%)
Frame = +2
Query: 155 SNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVDAILLVQEHNHPHILLLQIGNT 334
++YSFG KE K EK+ S+ +LAR+K +Y KEG+R +V+ I+++ +H HPHILLLQ N
Sbjct: 13 TSYSFG-KEEKKEKEQSLTSKLARLKDSYEKEGLRKAVEGIIIIHDHGHPHILLLQDNNY 71
Query: 335 FCKLPGGRLKPGENEVEGLKRKLTSKLG--GNSAGLVPDWKVGECVATWWRPNFETMMYP 508
F KLPGG+LKPGENE++GL RKLT KL G P W++G+ V+TWWRPNFE ++P
Sbjct: 72 F-KLPGGKLKPGENEIDGLIRKLTKKLSPTGTPVSDAP-WEIGDHVSTWWRPNFEPSLFP 129
Query: 509 YCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQL 688
Y P HITKPKECK+L++V L EK FAV NL L+AV L+E+Y+N QRYG VIS+IP +
Sbjct: 130 YIPSHITKPKECKKLFVVTLPEKCKFAVSNNLSLIAVSLYEIYNNSQRYGAVISSIPALI 189
Query: 689 SRFHF 703
SR+ F
Sbjct: 190 SRYTF 194
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,801,685,782
Number of Sequences: 518415
Number of Extensions: 36801685782
Number of Successful Extensions: 258262551
Number of sequences better than 0.0: 0
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