BLASTX 7.6.2
Query= UN12914 /QuerySize=1875
(1874 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G36690.1 | Symbols: ATU2AF65A | ATU2AF65A; RNA... 889 2e-258
TAIR9_protein||AT4G36690.2 | Symbols: ATU2AF65A | ATU2AF65A; RNA... 765 2e-221
TAIR9_protein||AT4G36690.3 | Symbols: ATU2AF65A | ATU2AF65A; RNA... 763 1e-220
TAIR9_protein||AT1G60900.1 | Symbols: | U2 snRNP auxiliary fact... 703 2e-202
TAIR9_protein||AT1G60830.1 | Symbols: | U2 snRNP auxiliary fact... 168 2e-041
TAIR9_protein||AT2G33435.1 | Symbols: | RNA recognition motif (... 89 9e-018
TAIR9_protein||AT1G20920.1 | Symbols: | DEAD box RNA helicase, ... 68 2e-011
TAIR9_protein||AT3G26560.1 | Symbols: | ATP-dependent RNA helic... 66 8e-011
TAIR9_protein||AT1G71800.1 | Symbols: | cleavage stimulation fa... 56 6e-008
TAIR9_protein||AT5G51300.1 | Symbols: | splicing factor-related... 54 3e-007
>TAIR9_protein||AT4G36690.1 | Symbols: ATU2AF65A | ATU2AF65A; RNA binding /
nucleic acid binding / nucleotide binding | chr4:17294139-17297609
REVERSE
Length = 574
Score = 889 bits (2295), Expect = 2e-258
Identities = 469/577 (81%), Positives = 497/577 (86%), Gaps = 34/577 (5%)
Frame = +1
Query: 91 MTDFEDHAGNGAAVDG----------GEIEDQLDWKSQEERRDNERECSRSKDREREKSG 240
M++FEDH GNG D GEIEDQLD K + E RD+ERE SRSKDREREK
Sbjct: 1 MSEFEDHEGNGTVADAIYDEENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGR 60
Query: 241 DKDSD------RRSRDRDVDRKSKERSRDRDGG----HHRSSRHRDRSRDRSDRRD---D 381
DKD + RRSRDRD KSKERSRD+D HHRSSRHRD SR+R +RR+
Sbjct: 61 DKDRERDSEVSRRSRDRD-GEKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRERGGR 119
Query: 382 DDDDHRRSRDRDYDRRRDD---RRRRRSRSRSKDRSRHR-RSRSPSKPK-RVSGFDMAPP 546
DDDD+RRSRDRD+DRRRDD RR RRSRSRSKDRS R RSRSPSK K RVSGFDMAPP
Sbjct: 120 DDDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPP 179
Query: 547 ASAMLAAGAATPVTAQVPPAPPTI---GVFPNIMSLPTGQAFGGLPMMPIQAMTQQATRH 717
ASAMLAAGAA VT QVPPAPPT+ G+FPN+ LPTGQ+FGGL MMPIQAMTQQATRH
Sbjct: 180 ASAMLAAGAA--VTGQVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRH 237
Query: 718 ARRVYVGGLSPQANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 897
ARRVYVGGLSP ANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE
Sbjct: 238 ARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 297
Query: 898 EASNAMSLDGIIFEGAPVKVRRPSDYNPSLAASLGPSHPSPHLNLAAVGLTPGASGGLEG 1077
EASNAMSLDGIIFEGAPVKVRRPSDYNPSLAA+LGPS PSPHLNLAAVGLTPGASGGLEG
Sbjct: 298 EASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEG 357
Query: 1078 PDRIFVGGLPYYFTELQVRELLESFGALKGFDLVKDRETGNSKGYAFCVYQEVAVTDIAC 1257
PDRIFVGGLPYYFTE QVRELLESFG LKGFDLVKDRETGNSKGYAFCVYQ+++VTDIAC
Sbjct: 358 PDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC 417
Query: 1258 AALNGIKMGDKTLTVRRANLGAMQPKPEQESVLMHAQQQIAFQVNMLQPGPVATMVVCLT 1437
AALNGIKMGDKTLTVRRAN G M KPEQE+VL+HAQQQIAFQ MLQPG VAT VVCLT
Sbjct: 418 AALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLT 477
Query: 1438 QVVNEDELRDDEEFEDIMEDVRQEGGKFGALTSVVIPRPSPGGEPVAGLGKVFLKYGDTD 1617
QVV EDELRDDEE+ DIMED+RQEGGKFGALT+VVIPRPSP GEPVAGLGKVFLKY DTD
Sbjct: 478 QVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFLKYADTD 537
Query: 1618 GSSRARSGMNGRRFGGNEVVAVFYPEDKFDQGDYGA* 1728
GS+RAR GMNGR+FGGNEVVAV+YPEDKF+QGDYGA*
Sbjct: 538 GSTRARFGMNGRKFGGNEVVAVYYPEDKFEQGDYGA* 574
>TAIR9_protein||AT4G36690.2 | Symbols: ATU2AF65A | ATU2AF65A; RNA binding /
nucleic acid binding / nucleotide binding | chr4:17294591-17297609
REVERSE
Length = 543
Score = 765 bits (1975), Expect = 2e-221
Identities = 410/509 (80%), Positives = 433/509 (85%), Gaps = 34/509 (6%)
Frame = +1
Query: 91 MTDFEDHAGNGAAVDG----------GEIEDQLDWKSQEERRDNERECSRSKDREREKSG 240
M++FEDH GNG D GEIEDQLD K + E RD+ERE SRSKDREREK
Sbjct: 1 MSEFEDHEGNGTVADAIYDEENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGR 60
Query: 241 DKDSD------RRSRDRDVDRKSKERSRDRDGG----HHRSSRHRDRSRDRSDRRD---D 381
DKD + RRSRDRD KSKERSRD+D HHRSSRHRD SR+R +RR+
Sbjct: 61 DKDRERDSEVSRRSRDRD-GEKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRERGGR 119
Query: 382 DDDDHRRSRDRDYDRRRDD---RRRRRSRSRSKDRSRHR-RSRSPSKPK-RVSGFDMAPP 546
DDDD+RRSRDRD+DRRRDD RR RRSRSRSKDRS R RSRSPSK K RVSGFDMAPP
Sbjct: 120 DDDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPP 179
Query: 547 ASAMLAAGAATPVTAQVPPAPPTI---GVFPNIMSLPTGQAFGGLPMMPIQAMTQQATRH 717
ASAMLAAGAA VT QVPPAPPT+ G+FPN+ LPTGQ+FGGL MMPIQAMTQQATRH
Sbjct: 180 ASAMLAAGAA--VTGQVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRH 237
Query: 718 ARRVYVGGLSPQANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 897
ARRVYVGGLSP ANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE
Sbjct: 238 ARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 297
Query: 898 EASNAMSLDGIIFEGAPVKVRRPSDYNPSLAASLGPSHPSPHLNLAAVGLTPGASGGLEG 1077
EASNAMSLDGIIFEGAPVKVRRPSDYNPSLAA+LGPS PSPHLNLAAVGLTPGASGGLEG
Sbjct: 298 EASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEG 357
Query: 1078 PDRIFVGGLPYYFTELQVRELLESFGALKGFDLVKDRETGNSKGYAFCVYQEVAVTDIAC 1257
PDRIFVGGLPYYFTE QVRELLESFG LKGFDLVKDRETGNSKGYAFCVYQ+++VTDIAC
Sbjct: 358 PDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC 417
Query: 1258 AALNGIKMGDKTLTVRRANLGAMQPKPEQESVLMHAQQQIAFQVNMLQPGPVATMVVCLT 1437
AALNGIKMGDKTLTVRRAN G M KPEQE+VL+HAQQQIAFQ MLQPG VAT VVCLT
Sbjct: 418 AALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLT 477
Query: 1438 QVVNEDELRDDEEFEDIMEDVRQEGGKFG 1524
QVV EDELRDDEE+ DIMED+RQEGGKFG
Sbjct: 478 QVVTEDELRDDEEYGDIMEDMRQEGGKFG 506
>TAIR9_protein||AT4G36690.3 | Symbols: ATU2AF65A | ATU2AF65A; RNA binding /
nucleic acid binding / nucleotide binding | chr4:17294422-17297609
REVERSE
Length = 566
Score = 763 bits (1969), Expect = 1e-220
Identities = 409/508 (80%), Positives = 432/508 (85%), Gaps = 34/508 (6%)
Frame = +1
Query: 91 MTDFEDHAGNGAAVDG----------GEIEDQLDWKSQEERRDNERECSRSKDREREKSG 240
M++FEDH GNG D GEIEDQLD K + E RD+ERE SRSKDREREK
Sbjct: 1 MSEFEDHEGNGTVADAIYDEENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGR 60
Query: 241 DKDSD------RRSRDRDVDRKSKERSRDRDGG----HHRSSRHRDRSRDRSDRRD---D 381
DKD + RRSRDRD KSKERSRD+D HHRSSRHRD SR+R +RR+
Sbjct: 61 DKDRERDSEVSRRSRDRD-GEKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRERGGR 119
Query: 382 DDDDHRRSRDRDYDRRRDD---RRRRRSRSRSKDRSRHR-RSRSPSKPK-RVSGFDMAPP 546
DDDD+RRSRDRD+DRRRDD RR RRSRSRSKDRS R RSRSPSK K RVSGFDMAPP
Sbjct: 120 DDDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPP 179
Query: 547 ASAMLAAGAATPVTAQVPPAPPTI---GVFPNIMSLPTGQAFGGLPMMPIQAMTQQATRH 717
ASAMLAAGAA VT QVPPAPPT+ G+FPN+ LPTGQ+FGGL MMPIQAMTQQATRH
Sbjct: 180 ASAMLAAGAA--VTGQVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRH 237
Query: 718 ARRVYVGGLSPQANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 897
ARRVYVGGLSP ANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE
Sbjct: 238 ARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 297
Query: 898 EASNAMSLDGIIFEGAPVKVRRPSDYNPSLAASLGPSHPSPHLNLAAVGLTPGASGGLEG 1077
EASNAMSLDGIIFEGAPVKVRRPSDYNPSLAA+LGPS PSPHLNLAAVGLTPGASGGLEG
Sbjct: 298 EASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHLNLAAVGLTPGASGGLEG 357
Query: 1078 PDRIFVGGLPYYFTELQVRELLESFGALKGFDLVKDRETGNSKGYAFCVYQEVAVTDIAC 1257
PDRIFVGGLPYYFTE QVRELLESFG LKGFDLVKDRETGNSKGYAFCVYQ+++VTDIAC
Sbjct: 358 PDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC 417
Query: 1258 AALNGIKMGDKTLTVRRANLGAMQPKPEQESVLMHAQQQIAFQVNMLQPGPVATMVVCLT 1437
AALNGIKMGDKTLTVRRAN G M KPEQE+VL+HAQQQIAFQ MLQPG VAT VVCLT
Sbjct: 418 AALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLT 477
Query: 1438 QVVNEDELRDDEEFEDIMEDVRQEGGKF 1521
QVV EDELRDDEE+ DIMED+RQEGGKF
Sbjct: 478 QVVTEDELRDDEEYGDIMEDMRQEGGKF 505
>TAIR9_protein||AT1G60900.1 | Symbols: | U2 snRNP auxiliary factor large
subunit, putative | chr1:22424008-22427806 FORWARD
Length = 590
Score = 703 bits (1812), Expect = 2e-202
Identities = 369/543 (67%), Positives = 424/543 (78%), Gaps = 20/543 (3%)
Frame = +1
Query: 118 NGAAVDGGEIEDQLDWKSQEERRDNERECSRSKDREREKSGDKDSDRRSRDRDVDRKSKE 297
NG DG + D+ + +E+ RD +RE SR +DR+RE+S D+ DR RDR DR S+E
Sbjct: 56 NGRDKDGNKDRDREKDRDREKSRDRDREKSRDRDRDRERSKDRQRDRHHRDRHRDR-SRE 114
Query: 298 RSR---DRDGGHHRSSRHRDRSRDRSDRRDDDDDDHRRSRDRDYDRRRDDRRRRRSRSRS 468
RS D D HHR SR RDR R R RD + RRSR R R RRSRS
Sbjct: 115 RSEKRDDLDDDHHRRSRDRDRRRSRD--RDREVRHRRRSRSRS-----RSRSERRSRSEH 167
Query: 469 KDRSRHR---RSRSPSKPKRVSGFDMAPPASAMLAAGAATPVTAQVPPAPPTI---GVFP 630
+ +S HR RSRS SK KR SGFDMAPP MLAA A QVP P T G+F
Sbjct: 168 RHKSEHRSRSRSRSRSKSKRRSGFDMAPP--DMLAA-TAVAAAGQVPSVPTTATIPGMFS 224
Query: 631 NIMSLPTGQAFGGLPMMPIQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQVMAAVGG 810
N+ + GQ G LP++P+QAMTQQATRHARRVYVGGL P ANEQSV+TFFSQVM+A+GG
Sbjct: 225 NMFPMVPGQQLGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQSVSTFFSQVMSAIGG 284
Query: 811 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLA 990
NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM+LDGII EG PVKVRRP+DYNPSLA
Sbjct: 285 NTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLA 344
Query: 991 ASLGPSHPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLESFGALKGF 1170
A+LGPS P+P+LNL AVGL+ G++GGLEGPDRIFVGGLPYYFTE+Q+RELLESFG L+GF
Sbjct: 345 ATLGPSQPNPNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGF 404
Query: 1171 DLVKDRETGNSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANLGAMQPKPEQES 1350
+LVKDRETGNSKGYAFCVYQ+ +VTDIACAALNGIKMGDKTLTVRRA GA+QPKPEQE
Sbjct: 405 NLVKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEE 464
Query: 1351 VLMHAQQQIAFQVNMLQPGPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGKFGAL 1530
VL++AQQQIA Q M QPG T +VCLTQVV D+LRDDEE+ +IMED+RQEGGKFG L
Sbjct: 465 VLLYAQQQIALQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNL 524
Query: 1531 TSVVIPRPSPGGEPVAGLGKVFLKYGDTDGSSRARSGMNGRRFGGNEVVAVFYPEDKFDQ 1710
+VVIPRP+P +P G+GKVFL+Y D DGSS+ARSGMNGR+FGGN+VVAV+YPEDK+ Q
Sbjct: 525 VNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQ 584
Query: 1711 GDY 1719
GDY
Sbjct: 585 GDY 587
>TAIR9_protein||AT1G60830.1 | Symbols: | U2 snRNP auxiliary factor large
subunit, putative | chr1:22395058-22395603 REVERSE
Length = 112
Score = 168 bits (423), Expect = 2e-041
Identities = 77/109 (70%), Positives = 91/109 (83%)
Frame = +1
Query: 1393 MLQPGPVATMVVCLTQVVNEDELRDDEEFEDIMEDVRQEGGKFGALTSVVIPRPSPGGEP 1572
MLQPG T +VCLTQVV D+LRDD E+ DIMED+ QEGGKFG L +VVIPRP+P +P
Sbjct: 1 MLQPGGTPTKIVCLTQVVTADDLRDDAEYADIMEDMSQEGGKFGNLVNVVIPRPNPDHDP 60
Query: 1573 VAGLGKVFLKYGDTDGSSRARSGMNGRRFGGNEVVAVFYPEDKFDQGDY 1719
G+GKVFL+Y D DGSS+ARSGMNGR+FGGN+VVAV+YPEDK+ QGDY
Sbjct: 61 TPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDY 109
>TAIR9_protein||AT2G33435.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr2:14166037-14169492 FORWARD
Length = 980
Score = 89 bits (219), Expect = 9e-018
Identities = 76/297 (25%), Positives = 133/297 (44%), Gaps = 27/297 (9%)
Frame = +1
Query: 163 WKSQEERRDNERECSRSKDREREKSGDKDSDRRSRDRDVDRKSKERSRDRDGGHHRSSRH 342
W+ +E+ + +R+ + R R +S D DR+ R + R K SR H R+
Sbjct: 683 WERREQPKSRQRDL--REKRRRSRSRDHGQDRQKRSSPLPRAEKATSR-----HKRNHEE 735
Query: 343 RDRS--RDRSDRRDDDDDDHR-----RSRDRDYDRRRDDRRRRRSRSRSKDRSRHRRSRS 501
R + +DRS + +D++ + ++ R Y + + R R + S ++ S
Sbjct: 736 RSENVVKDRSGKHHCNDNEDKVTSTVSNKSRRYSASKSELGGYSPRKRREQAS--TKAAS 793
Query: 502 P---SKPKRVSGFDMAPPASA-MLAAGAATPVTAQVPPAPPTIGVFPNIMSLPTGQAFGG 669
P S K+ + + +A +A M + + + A A PTI + P
Sbjct: 794 PPNLSSEKKSAKWGLAATVTAGMFSDSVFSGLQAATQTAYPTISEASLTLLKPLMVMDAP 853
Query: 670 LPMMPIQAMTQ-------QATRHARRVYVGGLSPQANEQSVATFFSQVMAAVGGNTAGPG 828
P + T ++TR RR+Y + A+E+S+ F+ M + G N
Sbjct: 854 FRTPPARQTTSFDSVQLTESTRRMRRLYAENVPDSASEKSLIECFNGYMLSSGSNHIKGS 913
Query: 829 DAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAASL 999
+ ++ IN EK A VE + ++AS A+SLDG F G+ +K+RRP DY + +S+
Sbjct: 914 EPCISCIINKEKSQALVEFLTPQDASAALSLDGCSFAGSNLKIRRPKDYVRTTVSSI 970
>TAIR9_protein||AT1G20920.1 | Symbols: | DEAD box RNA helicase, putative |
chr1:7285342-7288842 FORWARD
Length = 1167
Score = 68 bits (165), Expect = 2e-011
Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Frame = +1
Query: 139 GEIEDQLDWKSQEERRDNERECSRSKDREREKSGDKDSDRRSRDRDVDRKSKERSRDRDG 318
G E + D + ++ +RD ERE + K+RERE KD +RR R+R+ K + + R+R
Sbjct: 122 GHREHERD-RGKDRKRDREREERKDKERERE----KDRERREREREEREKERVKERERRE 176
Query: 319 GHHRSSRHRDRSRDRSDRRDDDDDDHRR--SRDRDYDRRRDDRRRRRSRSRSKDRSRH-- 486
R+R ++R RR+ + + R + + D D +RD +RRR+ K++ R
Sbjct: 177 REDGERDRREREKERGSRRNRERERSREVGNEESDDDVKRDLKRRRKEGGERKEKEREKS 236
Query: 487 --RRSRSPSKPKRVS 525
R SR PKR S
Sbjct: 237 VGRSSRHEDSPKRKS 251
>TAIR9_protein||AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |
chr3:9750122-9753719 REVERSE
Length = 1169
Score = 66 bits (159), Expect = 8e-011
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Frame = +1
Query: 166 KSQEERRDNERECSRSKD-REREKSGDKDSDRRSRDRDVDRKSKERSRDRDGGHHRSSRH 342
K +EE D + + KD +++ K +K+ +R + +R R+ ++R+RDRD R
Sbjct: 85 KKKEEGDDQKFKGLAIKDTKDKVKELEKEIEREAEER---RREEDRNRDRDRRESGRDRD 141
Query: 343 RDRSRDRSDRRDDDDDDHRRSRDRDYDRRRDDRR-RRRSR---SRSKDRSRHRRSR 498
RDR+RDR DRRD D R D + + RR DRR R R R +DR R RR++
Sbjct: 142 RDRNRDRDDRRDRHRDRERNRGDEEGEDRRSDRRHRERGRGDGGEGEDRRRDRRAK 197
>TAIR9_protein||AT1G71800.1 | Symbols: | cleavage stimulation factor, putative
| chr1:26999606-27001850 FORWARD
Length = 462
Score = 56 bits (134), Expect = 6e-008
Identities = 29/72 (40%), Positives = 39/72 (54%)
Frame = +1
Query: 1087 IFVGGLPYYFTELQVRELLESFGALKGFDLVKDRETGNSKGYAFCVYQEVAVTDIACAAL 1266
+FVG +PY TE Q+RE+ G + F LV DRETG KGY FC Y++ A L
Sbjct: 11 VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 1267 NGIKMGDKTLTV 1302
++ + L V
Sbjct: 71 QSYEINGRQLRV 82
>TAIR9_protein||AT5G51300.1 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 54 bits (128), Expect = 3e-007
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Frame = +1
Query: 967 SDYNPSLAASLGPSHPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLE 1146
S NP A + G + S H L + P + E +++G LP + + L
Sbjct: 445 SGSNPPWANNAG-NGASAHPGLGSTPTKPPSKEYDE--TNLYIGFLPPMLEDDGLINLFS 501
Query: 1147 SFGALKGFDLVKDRETGNSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRA 1311
SFG + ++KDR TG SKGY F Y +V + + A A+NG + +TL VR A
Sbjct: 502 SFGEIVMAKVIKDRVTGLSKGYGFVKYADVQMANTAVQAMNGYRFEGRTLAVRIA 556
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,848,706,077
Number of Sequences: 33410
Number of Extensions: 6848706077
Number of Successful Extensions: 232626689
Number of sequences better than 0.0: 0
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