BLASTX 7.6.2
Query= UN16301 /QuerySize=828
(827 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G16930.2 | Symbols: | ribosomal protein L27 f... 283 8e-077
TAIR9_protein||AT2G16930.1 | Symbols: | ribosomal protein L27 f... 283 8e-077
TAIR9_protein||AT2G16930.3 | Symbols: | ribosomal protein L27 f... 283 8e-077
TAIR9_protein||AT5G15220.1 | Symbols: | ribosomal protein L27 f... 282 2e-076
TAIR9_protein||AT5G40950.1 | Symbols: RPL27 | RPL27 (RIBOSOMAL P... 93 2e-019
>TAIR9_protein||AT2G16930.2 | Symbols: | ribosomal protein L27 family protein |
chr2:7341492-7342118 FORWARD
Length = 155
Score = 283 bits (724), Expect = 8e-077
Identities = 141/154 (91%), Positives = 145/154 (94%)
Frame = -3
Query: 684 MNFLNSAASLCRRVSLRELITEVPAYGGSGISDCSSSGLSLVLKRWATKKTAGSTKNGRD 505
MNFLNSAAS+CRRVSLRELITEVPAY GS ISD SSSGLSLVLKRWATKKTAGSTKNGRD
Sbjct: 1 MNFLNSAASICRRVSLRELITEVPAYTGSSISDGSSSGLSLVLKRWATKKTAGSTKNGRD 60
Query: 504 SKPKNLGVKKFGGENVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKNKIT 325
S PK LGVKKFGGE+VIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEK+KIT
Sbjct: 61 SNPKFLGVKKFGGESVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKSKIT 120
Query: 324 GRKWIHVDPKGGHVLHPIYTKAAMAKSTTVETAS 223
GRKWIHVDP GGHVLHPIYTKAA AKST + TAS
Sbjct: 121 GRKWIHVDPIGGHVLHPIYTKAAAAKSTKLNTAS 154
>TAIR9_protein||AT2G16930.1 | Symbols: | ribosomal protein L27 family protein |
chr2:7341492-7342118 FORWARD
Length = 155
Score = 283 bits (724), Expect = 8e-077
Identities = 141/154 (91%), Positives = 145/154 (94%)
Frame = -3
Query: 684 MNFLNSAASLCRRVSLRELITEVPAYGGSGISDCSSSGLSLVLKRWATKKTAGSTKNGRD 505
MNFLNSAAS+CRRVSLRELITEVPAY GS ISD SSSGLSLVLKRWATKKTAGSTKNGRD
Sbjct: 1 MNFLNSAASICRRVSLRELITEVPAYTGSSISDGSSSGLSLVLKRWATKKTAGSTKNGRD 60
Query: 504 SKPKNLGVKKFGGENVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKNKIT 325
S PK LGVKKFGGE+VIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEK+KIT
Sbjct: 61 SNPKFLGVKKFGGESVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKSKIT 120
Query: 324 GRKWIHVDPKGGHVLHPIYTKAAMAKSTTVETAS 223
GRKWIHVDP GGHVLHPIYTKAA AKST + TAS
Sbjct: 121 GRKWIHVDPIGGHVLHPIYTKAAAAKSTKLNTAS 154
>TAIR9_protein||AT2G16930.3 | Symbols: | ribosomal protein L27 family protein |
chr2:7341492-7342118 FORWARD
Length = 155
Score = 283 bits (724), Expect = 8e-077
Identities = 141/154 (91%), Positives = 145/154 (94%)
Frame = -3
Query: 684 MNFLNSAASLCRRVSLRELITEVPAYGGSGISDCSSSGLSLVLKRWATKKTAGSTKNGRD 505
MNFLNSAAS+CRRVSLRELITEVPAY GS ISD SSSGLSLVLKRWATKKTAGSTKNGRD
Sbjct: 1 MNFLNSAASICRRVSLRELITEVPAYTGSSISDGSSSGLSLVLKRWATKKTAGSTKNGRD 60
Query: 504 SKPKNLGVKKFGGENVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKNKIT 325
S PK LGVKKFGGE+VIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEK+KIT
Sbjct: 61 SNPKFLGVKKFGGESVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKSKIT 120
Query: 324 GRKWIHVDPKGGHVLHPIYTKAAMAKSTTVETAS 223
GRKWIHVDP GGHVLHPIYTKAA AKST + TAS
Sbjct: 121 GRKWIHVDPIGGHVLHPIYTKAAAAKSTKLNTAS 154
>TAIR9_protein||AT5G15220.1 | Symbols: | ribosomal protein L27 family protein |
chr5:4941466-4942133 REVERSE
Length = 155
Score = 282 bits (721), Expect = 2e-076
Identities = 139/154 (90%), Positives = 145/154 (94%)
Frame = -3
Query: 684 MNFLNSAASLCRRVSLRELITEVPAYGGSGISDCSSSGLSLVLKRWATKKTAGSTKNGRD 505
MNFLNSAAS+CRRVSLRELITEVPAY GS ISD SSSGLSLV KRWATKKTAGSTKNGRD
Sbjct: 1 MNFLNSAASICRRVSLRELITEVPAYSGSSISDGSSSGLSLVFKRWATKKTAGSTKNGRD 60
Query: 504 SKPKNLGVKKFGGENVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKNKIT 325
S PK LGVKKFGGE+VIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEK+KIT
Sbjct: 61 SNPKFLGVKKFGGESVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGRVRFEKSKIT 120
Query: 324 GRKWIHVDPKGGHVLHPIYTKAAMAKSTTVETAS 223
GRKWIHVDP GGHVLHPIYTKAA A+ST ++TAS
Sbjct: 121 GRKWIHVDPTGGHVLHPIYTKAAAAQSTKLKTAS 154
>TAIR9_protein||AT5G40950.1 | Symbols: RPL27 | RPL27 (RIBOSOMAL PROTEIN LARGE
SUBUNIT 27); structural constituent of ribosome |
chr5:16410866-16411845 FORWARD
Length = 199
Score = 93 bits (229), Expect = 2e-019
Identities = 51/84 (60%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Frame = -3
Query: 546 ATKKTAGSTKNGRDSKPKNLGVKKFGGENVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFA 367
A KK AGSTKNGRDS + LGVK +G + PG IIVRQRGT+FH G VGIGKDHT+F+
Sbjct: 59 AHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTKFHAGKNVGIGKDHTIFS 118
Query: 366 LKEGRVRFEKNKITGRKWIHVDPK 295
L +G V+FEK RK I V P+
Sbjct: 119 LIDGLVKFEKFG-PDRKKISVYPR 141
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,555,687,411
Number of Sequences: 33410
Number of Extensions: 8555687411
Number of Successful Extensions: 306270863
Number of sequences better than 0.0: 0
|