BLASTX 7.6.2
Query= UN16346 /QuerySize=1103
(1102 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G41840.1 | Symbols: | 40S ribosomal protein S... 303 1e-082
TAIR9_protein||AT1G58983.1 | Symbols: | 40S ribosomal protein S... 301 7e-082
TAIR9_protein||AT1G59359.1 | Symbols: | 40S ribosomal protein S... 301 7e-082
TAIR9_protein||AT1G58380.1 | Symbols: XW6 | XW6; structural cons... 301 7e-082
TAIR9_protein||AT1G58684.1 | Symbols: | 40S ribosomal protein S... 301 7e-082
TAIR9_protein||AT3G57490.1 | Symbols: | 40S ribosomal protein S... 293 2e-079
TAIR9_protein||AT2G33800.1 | Symbols: | ribosomal protein S5 fa... 49 7e-006
>TAIR9_protein||AT2G41840.1 | Symbols: | 40S ribosomal protein S2 (RPS2C) |
chr2:17460016-17461398 REVERSE
Length = 286
Score = 303 bits (775), Expect = 1e-082
Identities = 155/184 (84%), Positives = 165/184 (89%), Gaps = 8/184 (4%)
Frame = +2
Query: 59 MAERGGE---QRGAVGERGGFGRGFG--GGRGDRGGRGGPRGCGGRRGGRPAEEDKWTPV 223
MAERGGE +RG GERG FGRGFG GGRGDRGGR G G GGRRGGR +EE+KW PV
Sbjct: 1 MAERGGERGVERG--GERGDFGRGFGGRGGRGDRGGR-GRGGRGGRRGGRASEEEKWVPV 57
Query: 224 TKLGRLVKDGKIQKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRTR 403
TKLGRLV G I+++EQIYLHSLPVKEYQIID+L+GPTLKDEVMKIMPVQKQTRAGQRTR
Sbjct: 58 TKLGRLVAAGHIKQIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTR 117
Query: 404 FKAFVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCK 583
FKAFVVVGD NGHVGLGVKCSKEVATAIRG IILAKLSV+PVRRGYWGNKIGKPHTVPCK
Sbjct: 118 FKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 177
Query: 584 VTGE 595
VTG+
Sbjct: 178 VTGK 181
Score = 186 bits (472), Expect = 2e-047
Identities = 94/121 (77%), Positives = 103/121 (85%), Gaps = 1/121 (0%)
Frame = +3
Query: 546 GTRLGSLIRFLVRLRGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGST 725
G ++G ++ GKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGST
Sbjct: 165 GNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGST 224
Query: 726 KTLGNFVKATFDCLQKTYGFLTPEFWKETSFKKSPYQEYTDLLASKG-TTTKVITEVEDQ 902
KTLGNFVKATFDCLQKTYGFLTPEFWKET F +SPYQE+TD LASK +T+K VEDQ
Sbjct: 225 KTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLASKALSTSKPDPVVEDQ 284
Query: 903 A 905
A
Sbjct: 285 A 285
>TAIR9_protein||AT1G58983.1 | Symbols: | 40S ribosomal protein S2, putative |
chr1:21806279-21807475 REVERSE
Length = 285
Score = 301 bits (769), Expect = 7e-082
Identities = 158/185 (85%), Positives = 163/185 (88%), Gaps = 11/185 (5%)
Frame = +2
Query: 59 MAERGGE---QRGAVGERGGFGRGFGGGRGDRGGRG---GPRGCGGRRGGRPAEEDKWTP 220
MAERGGE +RG G+RG FGRGFGGGRG GGRG GPRG GRRGGR +EE KW P
Sbjct: 1 MAERGGESGAERG--GDRGDFGRGFGGGRG--GGRGRDRGPRG-RGRRGGRASEETKWVP 55
Query: 221 VTKLGRLVKDGKIQKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRT 400
VTKLGRLV D KI KLEQIYLHSLPVKEYQIID LVGPTLKDEVMKIMPVQKQTRAGQRT
Sbjct: 56 VTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRT 115
Query: 401 RFKAFVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPC 580
RFKAFVVVGD NGHVGLGVKCSKEVATAIRG IILAKLSV+PVRRGYWGNKIGKPHTVPC
Sbjct: 116 RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPC 175
Query: 581 KVTGE 595
KVTG+
Sbjct: 176 KVTGK 180
Score = 191 bits (484), Expect = 8e-049
Identities = 95/121 (78%), Positives = 105/121 (86%), Gaps = 1/121 (0%)
Frame = +3
Query: 546 GTRLGSLIRFLVRLRGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGST 725
G ++G ++ GKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGST
Sbjct: 164 GNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGST 223
Query: 726 KTLGNFVKATFDCLQKTYGFLTPEFWKETSFKKSPYQEYTDLLASKG-TTTKVITEVEDQ 902
KTLGNFVKATFDCLQKTYGFLTPEFWKET F +SPYQE+TD L++K + TKVITE EDQ
Sbjct: 224 KTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVSATKVITEGEDQ 283
Query: 903 A 905
A
Sbjct: 284 A 284
>TAIR9_protein||AT1G59359.1 | Symbols: | 40S ribosomal protein S2 (RPS2B) |
chr1:21842537-21843733 REVERSE
Length = 285
Score = 301 bits (769), Expect = 7e-082
Identities = 158/185 (85%), Positives = 163/185 (88%), Gaps = 11/185 (5%)
Frame = +2
Query: 59 MAERGGE---QRGAVGERGGFGRGFGGGRGDRGGRG---GPRGCGGRRGGRPAEEDKWTP 220
MAERGGE +RG G+RG FGRGFGGGRG GGRG GPRG GRRGGR +EE KW P
Sbjct: 1 MAERGGESGAERG--GDRGDFGRGFGGGRG--GGRGRDRGPRG-RGRRGGRASEETKWVP 55
Query: 221 VTKLGRLVKDGKIQKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRT 400
VTKLGRLV D KI KLEQIYLHSLPVKEYQIID LVGPTLKDEVMKIMPVQKQTRAGQRT
Sbjct: 56 VTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRT 115
Query: 401 RFKAFVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPC 580
RFKAFVVVGD NGHVGLGVKCSKEVATAIRG IILAKLSV+PVRRGYWGNKIGKPHTVPC
Sbjct: 116 RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPC 175
Query: 581 KVTGE 595
KVTG+
Sbjct: 176 KVTGK 180
Score = 191 bits (484), Expect = 8e-049
Identities = 95/121 (78%), Positives = 105/121 (86%), Gaps = 1/121 (0%)
Frame = +3
Query: 546 GTRLGSLIRFLVRLRGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGST 725
G ++G ++ GKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGST
Sbjct: 164 GNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGST 223
Query: 726 KTLGNFVKATFDCLQKTYGFLTPEFWKETSFKKSPYQEYTDLLASKG-TTTKVITEVEDQ 902
KTLGNFVKATFDCLQKTYGFLTPEFWKET F +SPYQE+TD L++K + TKVITE EDQ
Sbjct: 224 KTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVSATKVITEGEDQ 283
Query: 903 A 905
A
Sbjct: 284 A 284
>TAIR9_protein||AT1G58380.1 | Symbols: XW6 | XW6; structural constituent of
ribosome | chr1:21689115-21690085 FORWARD
Length = 285
Score = 301 bits (769), Expect = 7e-082
Identities = 158/185 (85%), Positives = 163/185 (88%), Gaps = 11/185 (5%)
Frame = +2
Query: 59 MAERGGE---QRGAVGERGGFGRGFGGGRGDRGGRG---GPRGCGGRRGGRPAEEDKWTP 220
MAERGGE +RG G+RG FGRGFGGGRG GGRG GPRG GRRGGR +EE KW P
Sbjct: 1 MAERGGEGGAERG--GDRGDFGRGFGGGRG--GGRGRDRGPRG-RGRRGGRASEETKWVP 55
Query: 221 VTKLGRLVKDGKIQKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRT 400
VTKLGRLV D KI KLEQIYLHSLPVKEYQIID LVGPTLKDEVMKIMPVQKQTRAGQRT
Sbjct: 56 VTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRT 115
Query: 401 RFKAFVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPC 580
RFKAFVVVGD NGHVGLGVKCSKEVATAIRG IILAKLSV+PVRRGYWGNKIGKPHTVPC
Sbjct: 116 RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPC 175
Query: 581 KVTGE 595
KVTG+
Sbjct: 176 KVTGK 180
Score = 191 bits (484), Expect = 8e-049
Identities = 95/121 (78%), Positives = 105/121 (86%), Gaps = 1/121 (0%)
Frame = +3
Query: 546 GTRLGSLIRFLVRLRGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGST 725
G ++G ++ GKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGST
Sbjct: 164 GNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGST 223
Query: 726 KTLGNFVKATFDCLQKTYGFLTPEFWKETSFKKSPYQEYTDLLASKG-TTTKVITEVEDQ 902
KTLGNFVKATFDCLQKTYGFLTPEFWKET F +SPYQE+TD L++K + TKVITE EDQ
Sbjct: 224 KTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVSATKVITEGEDQ 283
Query: 903 A 905
A
Sbjct: 284 A 284
>TAIR9_protein||AT1G58684.1 | Symbols: | 40S ribosomal protein S2, putative |
chr1:21770021-21771217 REVERSE
Length = 285
Score = 301 bits (769), Expect = 7e-082
Identities = 158/185 (85%), Positives = 163/185 (88%), Gaps = 11/185 (5%)
Frame = +2
Query: 59 MAERGGE---QRGAVGERGGFGRGFGGGRGDRGGRG---GPRGCGGRRGGRPAEEDKWTP 220
MAERGGE +RG G+RG FGRGFGGGRG GGRG GPRG GRRGGR +EE KW P
Sbjct: 1 MAERGGESGAERG--GDRGDFGRGFGGGRG--GGRGRDRGPRG-RGRRGGRASEETKWVP 55
Query: 221 VTKLGRLVKDGKIQKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRT 400
VTKLGRLV D KI KLEQIYLHSLPVKEYQIID LVGPTLKDEVMKIMPVQKQTRAGQRT
Sbjct: 56 VTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRT 115
Query: 401 RFKAFVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPC 580
RFKAFVVVGD NGHVGLGVKCSKEVATAIRG IILAKLSV+PVRRGYWGNKIGKPHTVPC
Sbjct: 116 RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPC 175
Query: 581 KVTGE 595
KVTG+
Sbjct: 176 KVTGK 180
Score = 191 bits (484), Expect = 8e-049
Identities = 95/121 (78%), Positives = 105/121 (86%), Gaps = 1/121 (0%)
Frame = +3
Query: 546 GTRLGSLIRFLVRLRGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGST 725
G ++G ++ GKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGST
Sbjct: 164 GNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGST 223
Query: 726 KTLGNFVKATFDCLQKTYGFLTPEFWKETSFKKSPYQEYTDLLASKG-TTTKVITEVEDQ 902
KTLGNFVKATFDCLQKTYGFLTPEFWKET F +SPYQE+TD L++K + TKVITE EDQ
Sbjct: 224 KTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVSATKVITEGEDQ 283
Query: 903 A 905
A
Sbjct: 284 A 284
>TAIR9_protein||AT3G57490.1 | Symbols: | 40S ribosomal protein S2 (RPS2D) |
chr3:21279824-21280887 REVERSE
Length = 277
Score = 293 bits (748), Expect = 2e-079
Identities = 145/167 (86%), Positives = 155/167 (92%), Gaps = 4/167 (2%)
Frame = +2
Query: 95 GERGGFGRGFGGGRGDRGGRGGPRGCGGRRGGRPAEEDKWTPVTKLGRLVKDGKIQKLEQ 274
G+RG FGRGF GGRG GGRGGPRG GRR GR EE+KW PVTKLGRLVK+GKI K+EQ
Sbjct: 10 GDRGDFGRGF-GGRG--GGRGGPRG-RGRRAGRAPEEEKWVPVTKLGRLVKEGKITKIEQ 65
Query: 275 IYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTNGHVGLG 454
IYLHSLPVKEYQIIDLLVGP+LKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD+NGHVGLG
Sbjct: 66 IYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLG 125
Query: 455 VKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGE 595
VKCSKEVATAIRG IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTG+
Sbjct: 126 VKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGK 172
Score = 176 bits (446), Expect = 2e-044
Identities = 85/103 (82%), Positives = 91/103 (88%)
Frame = +3
Query: 546 GTRLGSLIRFLVRLRGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGST 725
G ++G ++ GKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGST
Sbjct: 156 GNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGST 215
Query: 726 KTLGNFVKATFDCLQKTYGFLTPEFWKETSFKKSPYQEYTDLL 854
KTLGNFVKATFDCLQKTYGFLTPEFWKET F KSPYQE+TD L
Sbjct: 216 KTLGNFVKATFDCLQKTYGFLTPEFWKETRFSKSPYQEHTDFL 258
>TAIR9_protein||AT2G33800.1 | Symbols: | ribosomal protein S5 family protein |
chr2:14300925-14302352 REVERSE
Length = 304
Score = 49 bits (114), Expect = 7e-006
Identities = 22/63 (34%), Positives = 41/63 (65%)
Frame = +2
Query: 341 KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSV 520
++ V+++ V K + G++ +F+A VVVGD G+VG+G +KEV A++ I A+ ++
Sbjct: 148 EERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNI 207
Query: 521 IPV 529
+ V
Sbjct: 208 VQV 210
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,555,687,411
Number of Sequences: 33410
Number of Extensions: 8555687411
Number of Successful Extensions: 306270863
Number of sequences better than 0.0: 0
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