BLASTX 7.6.2
Query= UN20086 /QuerySize=1682
(1681 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297818112|ref|XP_002876939.1| hypothetical protein ARALYDRAFT... 437 3e-120
gi|15230931|ref|NP_189221.1| 50S ribosomal protein L15 [Arabidop... 434 2e-119
gi|16497|emb|CAA77593.1| Plastid ribosomal protein CL15 [Arabido... 431 2e-118
gi|388448|emb|CAA77592.1| plastid ribosomal protein CL15 [Arabid... 425 1e-116
gi|225423989|ref|XP_002279311.1| PREDICTED: hypothetical protein... 361 3e-097
gi|297737813|emb|CBI27014.3| unnamed protein product [Vitis vini... 359 1e-096
gi|255581635|ref|XP_002531621.1| 50S ribosomal protein L15, puta... 354 3e-095
gi|224101737|ref|XP_002312401.1| predicted protein [Populus tric... 348 2e-093
gi|255627797|gb|ACU14243.1| unknown [Glycine max] 339 1e-090
gi|400986|sp|P31165.1|RK15_PEA RecName: Full=50S ribosomal prote... 332 1e-088
gi|189096136|pdb|3BBO|N Chain N, Homology Model For The Spinach ... 330 4e-088
gi|116790901|gb|ABK25784.1| unknown [Picea sitchensis] 313 7e-083
gi|226532984|ref|NP_001141277.1| hypothetical protein LOC1002733... 311 3e-082
gi|326489899|dbj|BAJ94023.1| predicted protein [Hordeum vulgare ... 303 9e-080
gi|242041733|ref|XP_002468261.1| hypothetical protein SORBIDRAFT... 302 2e-079
gi|115451609|ref|NP_001049405.1| Os03g0219900 [Oryza sativa Japo... 300 6e-079
gi|297814816|ref|XP_002875291.1| hypothetical protein ARALYDRAFT... 295 2e-077
gi|18404727|ref|NP_566784.1| uncharacterized protein [Arabidopsi... 268 2e-069
gi|302794863|ref|XP_002979195.1| hypothetical protein SELMODRAFT... 263 6e-068
gi|168002184|ref|XP_001753794.1| predicted protein [Physcomitrel... 261 3e-067
>gi|297818112|ref|XP_002876939.1| hypothetical protein ARALYDRAFT_484358
[Arabidopsis lyrata subsp. lyrata]
Length = 275
Score = 437 bits (1123), Expect = 3e-120
Identities = 228/276 (82%), Positives = 244/276 (88%), Gaps = 8/276 (2%)
Frame = +3
Query: 30 MAVPLSISTNPPISRQCHRPCFPSTSFKGNVSVLGANPRQILSLKLHHKRRT-------G 188
MA PLSIS+NP S +C+R FPSTSFKGNVSVLGANP QILSLKL+ K +T
Sbjct: 1 MATPLSISSNPLTSHRCYRLHFPSTSFKGNVSVLGANPSQILSLKLNQKLKTRKQQQSAR 60
Query: 189 PLVVFNQTSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKS 368
PLVV +Q ++++S A ERFRLDNLGPQPGSRKR KRKGRGISAGQGASCGFGMRGQKS
Sbjct: 61 PLVVVSQ-AAATSEVVAPERFRLDNLGPQPGSRKRQKRKGRGISAGQGASCGFGMRGQKS 119
Query: 369 RSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLE 548
RSGPGIMRGFEGGQTALYRRLPKLRGIAGGMR+GLPKY+PVNLKDIETAGF++GDEVSLE
Sbjct: 120 RSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNLKDIETAGFQEGDEVSLE 179
Query: 549 TLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRK 728
TLK KGLINPSGRERKLPLKILGTGELS+KL FKARAFST AKEKLEASGCTLTVLPGRK
Sbjct: 180 TLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPGRK 239
Query: 729 KWVKPSVAKNLARADEYFAKKRAEAAASFSEPATSA 836
KWVKPSVAKN ARADEYFAKKRA AA + SEPA SA
Sbjct: 240 KWVKPSVAKNQARADEYFAKKRAAAAEATSEPAASA 275
>gi|15230931|ref|NP_189221.1| 50S ribosomal protein L15 [Arabidopsis thaliana]
Length = 277
Score = 434 bits (1116), Expect = 2e-119
Identities = 227/277 (81%), Positives = 244/277 (88%), Gaps = 8/277 (2%)
Frame = +3
Query: 30 MAVPLSISTNPPISRQCHRPCFPSTSFKGNVSVLGANPRQILSLKLHHKRRT-------G 188
MA PLSIS+NP SR C+R STSFKGNVSVLGANP QILSLKL+ +T
Sbjct: 1 MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60
Query: 189 PLVVFNQTSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKS 368
PLVV +QT+++SS+ A ERFRLDNLGPQPGSRK+ KRKGRGISAGQGASCGFGMRGQKS
Sbjct: 61 PLVVVSQTAATSSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQKS 120
Query: 369 RSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLE 548
RSGPGIMRGFEGGQTALYRRLPKLRGIAGGMR+GLPKY+PVN+KDIETAGF++GDEVSLE
Sbjct: 121 RSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLE 180
Query: 549 TLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRK 728
TLK KGLINPSGRERKLPLKILGTGELS+KL FKARAFST AKEKLEASGCTLTVLPGRK
Sbjct: 181 TLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPGRK 240
Query: 729 KWVKPSVAKNLARADEYFAKKRAEAA-ASFSEPATSA 836
KWVKPSVAKN ARADEYFAKKRA AA A+ SEPA SA
Sbjct: 241 KWVKPSVAKNQARADEYFAKKRAAAAEAATSEPAASA 277
>gi|16497|emb|CAA77593.1| Plastid ribosomal protein CL15 [Arabidopsis thaliana]
Length = 277
Score = 431 bits (1108), Expect = 2e-118
Identities = 226/277 (81%), Positives = 243/277 (87%), Gaps = 8/277 (2%)
Frame = +3
Query: 30 MAVPLSISTNPPISRQCHRPCFPSTSFKGNVSVLGANPRQILSLKLHHKRRT-------G 188
MA PLSIS+NP SR C+R STSFKGNVSVLGANP QILSLKL+ +T
Sbjct: 1 MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60
Query: 189 PLVVFNQTSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKS 368
PLVV +QT+++SS+ A ERFRLDNLGPQPGSRK+ KRKGRGISAGQGASCGFGMRGQKS
Sbjct: 61 PLVVVSQTAATSSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQKS 120
Query: 369 RSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLE 548
RSGPGIMRGFEGGQTALYRRLPKLRGIAGGMR+GLPKY+PVN+KDIETAGF++GDEVSLE
Sbjct: 121 RSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLE 180
Query: 549 TLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRK 728
TLK KGLINPSGRERKLPLKILGTGELS+KL FKARAFST AKEKLEASGCTLTVLP RK
Sbjct: 181 TLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPERK 240
Query: 729 KWVKPSVAKNLARADEYFAKKRAEAA-ASFSEPATSA 836
KWVKPSVAKN ARADEYFAKKRA AA A+ SEPA SA
Sbjct: 241 KWVKPSVAKNQARADEYFAKKRAAAAEAATSEPAASA 277
>gi|388448|emb|CAA77592.1| plastid ribosomal protein CL15 [Arabidopsis
thaliana]
Length = 273
Score = 425 bits (1092), Expect = 1e-116
Identities = 223/273 (81%), Positives = 240/273 (87%), Gaps = 8/273 (2%)
Frame = +3
Query: 42 LSISTNPPISRQCHRPCFPSTSFKGNVSVLGANPRQILSLKLHHKRRT-------GPLVV 200
LSIS+NP SR C+R STSFKGNVSVLGANP QILSLKL+ +T PLVV
Sbjct: 1 LSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFARPLVV 60
Query: 201 FNQTSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGP 380
+QT+++SS+ A ERFRLDNLGPQPGSRK+ KRKGRGISAGQGASCGFGMRGQKSRSGP
Sbjct: 61 VSQTAATSSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQKSRSGP 120
Query: 381 GIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKL 560
GIMRGFEGGQTALYRRLPKLRGIAGGMR+GLPKY+PVN+KDIETAGF++GDEVSLETLK
Sbjct: 121 GIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLETLKQ 180
Query: 561 KGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVK 740
KGLINPSGRERKLPLKILGTGELS+KL FKARAFST AKEKLEASGCTLTVLP RKKWVK
Sbjct: 181 KGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPERKKWVK 240
Query: 741 PSVAKNLARADEYFAKKRAEAA-ASFSEPATSA 836
PSVAKN ARADEYFAKKRA AA A+ SEPA SA
Sbjct: 241 PSVAKNQARADEYFAKKRAAAAEAATSEPAASA 273
>gi|225423989|ref|XP_002279311.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 299
Score = 361 bits (925), Expect = 3e-097
Identities = 188/266 (70%), Positives = 214/266 (80%), Gaps = 7/266 (2%)
Frame = +3
Query: 30 MAVPLSISTNPPISRQCHRPCF---PSTSFKGNVSVLGANPRQILSLKLHHKRRTGPLVV 200
MA LS+S+ P P F PS+ FKGNV L ANP Q L++KL K + V
Sbjct: 38 MAALLSVSSAP----SSRTPLFLHHPSSPFKGNVRNLKANPCQFLTIKLEVKEKVRKSGV 93
Query: 201 FNQTSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGP 380
+ S SS + RFRLDNLGPQPGSRK+AKRKGRGISAGQG SCGFGMRGQKSRSGP
Sbjct: 94 VVASQGSPSSVVDNVRFRLDNLGPQPGSRKKAKRKGRGISAGQGNSCGFGMRGQKSRSGP 153
Query: 381 GIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKL 560
G+M+GFEGGQ LYRR+PKLRGIAGGM AGLPKYVPVNLKDIE AGF++G+EVSL++LK
Sbjct: 154 GVMKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLDSLKK 213
Query: 561 KGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVK 740
KGLINPSGRER+LPLKILG G+LSVKLN KARAFS+SAKEKLEA+GC++TVLPGRKKW+K
Sbjct: 214 KGLINPSGRERRLPLKILGAGDLSVKLNIKARAFSSSAKEKLEAAGCSITVLPGRKKWLK 273
Query: 741 PSVAKNLARADEYFAKKRAEAAASFS 818
PSV KNLARA+EYFAKKRA A + S
Sbjct: 274 PSVIKNLARAEEYFAKKRAAAEQASS 299
>gi|297737813|emb|CBI27014.3| unnamed protein product [Vitis vinifera]
Length = 262
Score = 359 bits (920), Expect = 1e-096
Identities = 187/265 (70%), Positives = 213/265 (80%), Gaps = 7/265 (2%)
Frame = +3
Query: 33 AVPLSISTNPPISRQCHRPCF---PSTSFKGNVSVLGANPRQILSLKLHHKRRTGPLVVF 203
A LS+S+ P P F PS+ FKGNV L ANP Q L++KL K + V
Sbjct: 2 AALLSVSSAP----SSRTPLFLHHPSSPFKGNVRNLKANPCQFLTIKLEVKEKVRKSGVV 57
Query: 204 NQTSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPG 383
+ S SS + RFRLDNLGPQPGSRK+AKRKGRGISAGQG SCGFGMRGQKSRSGPG
Sbjct: 58 VASQGSPSSVVDNVRFRLDNLGPQPGSRKKAKRKGRGISAGQGNSCGFGMRGQKSRSGPG 117
Query: 384 IMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLK 563
+M+GFEGGQ LYRR+PKLRGIAGGM AGLPKYVPVNLKDIE AGF++G+EVSL++LK K
Sbjct: 118 VMKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLDSLKKK 177
Query: 564 GLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKP 743
GLINPSGRER+LPLKILG G+LSVKLN KARAFS+SAKEKLEA+GC++TVLPGRKKW+KP
Sbjct: 178 GLINPSGRERRLPLKILGAGDLSVKLNIKARAFSSSAKEKLEAAGCSITVLPGRKKWLKP 237
Query: 744 SVAKNLARADEYFAKKRAEAAASFS 818
SV KNLARA+EYFAKKRA A + S
Sbjct: 238 SVIKNLARAEEYFAKKRAAAEQASS 262
>gi|255581635|ref|XP_002531621.1| 50S ribosomal protein L15, putative [Ricinus
communis]
Length = 263
Score = 354 bits (908), Expect = 3e-095
Identities = 181/250 (72%), Positives = 210/250 (84%), Gaps = 6/250 (2%)
Frame = +3
Query: 93 FPSTSFKGNVSVLGANPRQILSLKLHHKRRTG--PLVVFNQTSSSSS----SPAASERFR 254
+PS+ FKGN++ L ++ L ++ + G LVV NQ S+++ S ++ RFR
Sbjct: 11 YPSSHFKGNLTSLRLKTCTLIPLNFNNAKPKGTQQLVVINQARSTAAAAIQSASSGVRFR 70
Query: 255 LDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLP 434
LDNLGPQ GSRKR KRKGRGI+AGQG SCGFGMRGQKSRSGPG+ +GFEGGQ LYRR+P
Sbjct: 71 LDNLGPQRGSRKRGKRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIP 130
Query: 435 KLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKIL 614
KLRGIAGGM AGLPK+VPVNLKDIE AGF++G+EVSLETLK KGLINPSGRER+LPLKIL
Sbjct: 131 KLRGIAGGMHAGLPKFVPVNLKDIEAAGFQEGEEVSLETLKEKGLINPSGRERRLPLKIL 190
Query: 615 GTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKR 794
G GELSVK+N KARAFSTSAKEKLEA+GC+LTVLPGRKKWVKPSVAKNLARA+EYFAKK+
Sbjct: 191 GDGELSVKVNIKARAFSTSAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKK 250
Query: 795 AEAAASFSEP 824
A AAA+ SEP
Sbjct: 251 AAAAAAASEP 260
>gi|224101737|ref|XP_002312401.1| predicted protein [Populus trichocarpa]
Length = 256
Score = 348 bits (892), Expect = 2e-093
Identities = 179/247 (72%), Positives = 202/247 (81%), Gaps = 3/247 (1%)
Frame = +3
Query: 87 PCFPSTSFKGNVSVLGANPRQILSLKLHHKRRTGPLVVFNQTSSSSSSPAASERFRLDNL 266
PC PS+ FKGN++ L L LH K + +VV + S + ++ R RLDNL
Sbjct: 11 PC-PSSPFKGNLTRLKPKTCNFTCLTLHSKNKRPSVVVNQAAAPSVVTTSSGARLRLDNL 69
Query: 267 GPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRG 446
GPQPGSRK+ KRKGRGISAGQG SCGFGMRGQKSRSGPG+ +GFEGGQ LYRR+PKLRG
Sbjct: 70 GPQPGSRKKGKRKGRGISAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRG 129
Query: 447 IAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGTGE 626
IAGGM AGLPKYVPVNLKDI +AGF++G EVSLETLK KGLINPSGRER+LPLK+LG GE
Sbjct: 130 IAGGMHAGLPKYVPVNLKDIASAGFQEGAEVSLETLKEKGLINPSGRERRLPLKVLGDGE 189
Query: 627 LSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRAEAA 806
LSVKLN KARAFS +AKEKLEA+GC+LTVLPGRKKWVKPSVAKNLARA+EYFAKKR AA
Sbjct: 190 LSVKLNIKARAFSAAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKR--AA 247
Query: 807 ASFSEPA 827
A SEP+
Sbjct: 248 AIVSEPS 254
>gi|255627797|gb|ACU14243.1| unknown [Glycine max]
Length = 256
Score = 339 bits (867), Expect = 1e-090
Identities = 182/250 (72%), Positives = 202/250 (80%), Gaps = 13/250 (5%)
Frame = +3
Query: 87 PCFPSTSFKGNVSVLGANPRQILSLKLHHKRRTGPLV-VFNQTSSSSS---SPAASERFR 254
P P + FKG V L A P L ++ PL+ V N+ +S SS +P+ RFR
Sbjct: 13 PWRPLSPFKGTVKTLVAKP------WLKKIQQARPLISVVNKAASLSSPVTAPSVGVRFR 66
Query: 255 LDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLP 434
LDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPG+ +GFEGGQ LYRR+P
Sbjct: 67 LDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIP 126
Query: 435 KLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKIL 614
KLRGIAGGM AGLPKYV VNL+DIE A F++G+EVSLE+LK KG+INPSGRER+LPLKIL
Sbjct: 127 KLRGIAGGMHAGLPKYVHVNLRDIEDAKFKEGEEVSLESLKAKGVINPSGRERRLPLKIL 186
Query: 615 GTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKR 794
G GELS KL KARAFSTSAKEKLE +GC+LTVLPGRKKWVKPSVAKNLARADEYFAKKR
Sbjct: 187 GEGELSKKLTLKARAFSTSAKEKLENAGCSLTVLPGRKKWVKPSVAKNLARADEYFAKKR 246
Query: 795 AEAAASFSEP 824
A AA SEP
Sbjct: 247 AMAA---SEP 253
>gi|400986|sp|P31165.1|RK15_PEA RecName: Full=50S ribosomal protein L15,
chloroplastic; AltName: Full=CL15; Flags: Precursor
Length = 258
Score = 332 bits (850), Expect = 1e-088
Identities = 176/243 (72%), Positives = 192/243 (79%), Gaps = 2/243 (0%)
Frame = +3
Query: 99 STSFKGNVSVLGANPRQILSLKLHHKRRTGPLVVFNQTSSSSSSPAASERFRLDNLGPQP 278
++ FKGNV L A P LK+ + +V ++ + S + RFRLDNLGPQP
Sbjct: 16 ASPFKGNVKTLVAKPCLCPCLKIQRTKLRVSVVNKAASAYNVKSSGENVRFRLDNLGPQP 75
Query: 279 GSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGG 458
GSRKR KRKGRGI+AGQGASCGFGMRGQKSRSGPGIMRGFEGGQ LYRRLPKLRGIAGG
Sbjct: 76 GSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGIAGG 135
Query: 459 MRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGTGELSVK 638
M AGLPKYV VNL DIE AGF+DG+EVSLETLK K +INPSGRERKLPLKIL GELS K
Sbjct: 136 MHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPSGRERKLPLKILADGELSKK 195
Query: 639 LNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRAEAAASFS 818
L KA AFSTSAKEKLE +GC+L VLPGRKKWVKPSVAKNLARA+EYFAKKR A S
Sbjct: 196 LTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKNLARAEEYFAKKRGGETA--S 253
Query: 819 EPA 827
EPA
Sbjct: 254 EPA 256
>gi|189096136|pdb|3BBO|N Chain N, Homology Model For The Spinach Chloroplast 50s
Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 257
Score = 330 bits (846), Expect = 4e-088
Identities = 178/244 (72%), Positives = 196/244 (80%), Gaps = 5/244 (2%)
Frame = +3
Query: 99 STSFKGNVSVLGANPRQILSLKLHHKRRTGPLVVFNQTSSSSSSPAASER-FRLDNLGPQ 275
++ FKGNV L A P LK+ +R + V N+ +S+ + ++ E FRLDNLGPQ
Sbjct: 16 ASPFKGNVKTLVAKPCLCPCLKI--QRTKLRVSVVNKAASAYNVKSSGENVFRLDNLGPQ 73
Query: 276 PGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAG 455
PGSRKR KRKGRGI+AGQGASCGFGMRGQKSRSGPGIMRGFEGGQ LYRRLPKLRGIAG
Sbjct: 74 PGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGIAG 133
Query: 456 GMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGTGELSV 635
GM AGLPKYV VNL DIE AGF+DG+EVSLETLK K +INPSGRERKLPLKIL GELS
Sbjct: 134 GMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPSGRERKLPLKILADGELSK 193
Query: 636 KLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRAEAAASF 815
KL KA AFSTSAKEKLE +GC+L VLPGRKKWVKPSVAKNLARA+EYFAKKR A
Sbjct: 194 KLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKNLARAEEYFAKKRGGETA-- 251
Query: 816 SEPA 827
SEPA
Sbjct: 252 SEPA 255
>gi|116790901|gb|ABK25784.1| unknown [Picea sitchensis]
Length = 263
Score = 313 bits (801), Expect = 7e-083
Identities = 157/200 (78%), Positives = 175/200 (87%), Gaps = 5/200 (2%)
Frame = +3
Query: 207 QTSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGI 386
+TSSSS RFRLDNLGPQ GSRKR KRKGRG +AGQG SCGFGMRGQKSRSGPG+
Sbjct: 68 ETSSSSIG-----RFRLDNLGPQRGSRKRNKRKGRGHAAGQGGSCGFGMRGQKSRSGPGV 122
Query: 387 MRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKG 566
GFEGGQ LYRR+PKLRGI+GGM AGLPKYVPVNL+DIE AGF+DG+EVSLE+LK KG
Sbjct: 123 RHGFEGGQMPLYRRIPKLRGISGGMGAGLPKYVPVNLEDIEAAGFKDGEEVSLESLKSKG 182
Query: 567 LINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPS 746
LINPSGRER+LPLKILG GEL+ KL KARAFS+SAK+KLE++GCTL LPGRKKWVKPS
Sbjct: 183 LINPSGRERRLPLKILGDGELTKKLTIKARAFSSSAKQKLESNGCTLITLPGRKKWVKPS 242
Query: 747 VAKNLARADEYFAKKRAEAA 806
V K+LARADEYFA+KRAEA+
Sbjct: 243 VVKHLARADEYFARKRAEAS 262
>gi|226532984|ref|NP_001141277.1| hypothetical protein LOC100273366 [Zea mays]
Length = 267
Score = 311 bits (796), Expect = 3e-082
Identities = 165/251 (65%), Positives = 189/251 (75%), Gaps = 2/251 (0%)
Frame = +3
Query: 81 HRPCFPSTSFKGNVSVLG--ANPRQILSLKLHHKRRTGPLVVFNQTSSSSSSPAASERFR 254
H P F S+S G + G A PR + L +R T + +S + A E+FR
Sbjct: 17 HIPAFTSSSVVGPGILAGRWAAPRALPLRALPPRRVTVVCSSAAAAAEASDAAAPVEKFR 76
Query: 255 LDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLP 434
LDNLGPQ GSR+R KRKGRGI+AGQGASCGFGMRGQKSRSGPG+ RGFEGGQ LYRRLP
Sbjct: 77 LDNLGPQKGSRRRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRLP 136
Query: 435 KLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKIL 614
KLRGIAGGM GLPKYVP NLKDI GF+DGDE+SLE+LK +GLINPSGRERKLPLKIL
Sbjct: 137 KLRGIAGGMHIGLPKYVPFNLKDIVRGGFKDGDEISLESLKSRGLINPSGRERKLPLKIL 196
Query: 615 GTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKR 794
G G++SVKLN KA AFS SAKEKLEA+GC+LT+LP RKKW+ + KN ARA+EYFAKK+
Sbjct: 197 GDGDVSVKLNIKAGAFSASAKEKLEAAGCSLTLLPKRKKWLPQNYLKNQARAEEYFAKKK 256
Query: 795 AEAAASFSEPA 827
A A S S A
Sbjct: 257 AGAGESDSGSA 267
>gi|326489899|dbj|BAJ94023.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 261
Score = 303 bits (774), Expect = 9e-080
Identities = 158/250 (63%), Positives = 186/250 (74%), Gaps = 4/250 (1%)
Frame = +3
Query: 63 PISRQCHRPCFPSTSFKGNVSVLGANPRQILSLKLHHKRRTGPLVVFNQTSSSSSSPAAS 242
P + H P ++S + R+ L L+ RR VV + +S + P
Sbjct: 11 PAATFLHLPASTASSSRFAAIPRSLAGRRALLLRARAPRRV--TVVCSAAETSEAEPV-- 66
Query: 243 ERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALY 422
E+FRLDNL PQ G+R++ KRKGRGISAGQGASCGFGMRGQKSRSGPG+ RGFEGGQ LY
Sbjct: 67 EKFRLDNLSPQKGARRKPKRKGRGISAGQGASCGFGMRGQKSRSGPGVRRGFEGGQMPLY 126
Query: 423 RRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLP 602
RRLPKLRGIAGGM GLPKYVP NL+DI GF+DGDE+SLE+LK +GLINPSGRERKLP
Sbjct: 127 RRLPKLRGIAGGMHIGLPKYVPFNLRDIVQGGFKDGDEISLESLKSRGLINPSGRERKLP 186
Query: 603 LKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYF 782
LKILG G+LSVKLN KA AFS++AKEKLEA+GCTLTVLP RKKW+ + KN ARA+EYF
Sbjct: 187 LKILGDGDLSVKLNIKAGAFSSAAKEKLEAAGCTLTVLPKRKKWLPAAYVKNQARAEEYF 246
Query: 783 AKKRAEAAAS 812
+KK+ A S
Sbjct: 247 SKKKGGAGES 256
>gi|242041733|ref|XP_002468261.1| hypothetical protein SORBIDRAFT_01g042610
[Sorghum bicolor]
Length = 269
Score = 302 bits (772), Expect = 2e-079
Identities = 150/202 (74%), Positives = 169/202 (83%)
Frame = +3
Query: 213 SSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMR 392
+ +S + A E+FRLDNLGPQ GSR+R KRKGRGI+AGQGASCGFGMRGQKSRSGPG+ R
Sbjct: 65 AEASDAAAPVEKFRLDNLGPQKGSRRRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRR 124
Query: 393 GFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLI 572
GFEGGQ LYRRLPKLRGIAGGM GLPKYV NLKDI GF+DGDE+SLETLK +GLI
Sbjct: 125 GFEGGQMPLYRRLPKLRGIAGGMHIGLPKYVAFNLKDIVRGGFKDGDEISLETLKSRGLI 184
Query: 573 NPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVA 752
NPSGRERKLPLKILG G++SVKLN KA AFS SAKEKLEA+GC+LT+LP RKKW+ +
Sbjct: 185 NPSGRERKLPLKILGDGDVSVKLNIKAGAFSASAKEKLEAAGCSLTLLPKRKKWLSQNYL 244
Query: 753 KNLARADEYFAKKRAEAAASFS 818
KN ARA+EYFAKK+ A S S
Sbjct: 245 KNQARAEEYFAKKKGGAGESDS 266
>gi|115451609|ref|NP_001049405.1| Os03g0219900 [Oryza sativa Japonica Group]
Length = 263
Score = 300 bits (767), Expect = 6e-079
Identities = 148/219 (67%), Positives = 176/219 (80%)
Frame = +3
Query: 156 SLKLHHKRRTGPLVVFNQTSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGA 335
S+ L + R VV + ++ ++ +E+FRLDNLGPQ GSR+R KRKGRGI+AGQGA
Sbjct: 40 SVVLRARPRRCVTVVCSAAAAEAAEAEPAEKFRLDNLGPQKGSRRRPKRKGRGIAAGQGA 99
Query: 336 SCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETA 515
SCGFGMRGQKSRSGPG+ RGFEGGQ LYRR+PKLRGIAGGM GLPKYVP NL+D+
Sbjct: 100 SCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRIPKLRGIAGGMHIGLPKYVPFNLRDLARG 159
Query: 516 GFEDGDEVSLETLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEAS 695
GF+DGDE+SLE+LK +GLINPSGRERKLPLKILG G++SVKLN KA AFS SAKEKLEA+
Sbjct: 160 GFKDGDEISLESLKSRGLINPSGRERKLPLKILGDGDVSVKLNIKAGAFSASAKEKLEAA 219
Query: 696 GCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRAEAAAS 812
GCTL+++P RKKW+ S KN ARA+EYF+KK A S
Sbjct: 220 GCTLSLVPKRKKWLPQSYLKNQARAEEYFSKKNGGAGES 258
>gi|297814816|ref|XP_002875291.1| hypothetical protein ARALYDRAFT_904770
[Arabidopsis lyrata subsp. lyrata]
Length = 377
Score = 295 bits (754), Expect = 2e-077
Identities = 164/217 (75%), Positives = 174/217 (80%), Gaps = 13/217 (5%)
Frame = -1
Query: 1663 DQEKNQ-TEAYLSVMP*HIKEWVAVEDARGFMNAKLRSCSSESCEFNGTYSDLRKHARLQ 1487
DQEKN+ + + HIKEWV VE AR FMN+K RSCSSE+C+F+GTYSDLRKHARL
Sbjct: 164 DQEKNKPPKLTCPLCRGHIKEWVVVEAARYFMNSKHRSCSSETCDFSGTYSDLRKHARLL 223
Query: 1486 HPGVRPSEADPERQRSWRRLERQRDLGDLLSTLQSSFGGEERSSNDDGILSFDDGGWLTV 1307
HPGVRPSEADPERQRSWRRLERQRDLGDL+STL SSFGGEER SNDDGIL DG LTV
Sbjct: 224 HPGVRPSEADPERQRSWRRLERQRDLGDLISTLNSSFGGEER-SNDDGILF--DGSLLTV 280
Query: 1306 FFLIRVFRPESSGGGSRSSSWSGTSRARSHIGVRRRSSR---LWGESYEGDTGTSSRDRD 1136
FLIRVFRPESSG S SSSWSG SRARS IG RRR R LWGESYEG+TGTSS RD
Sbjct: 281 IFLIRVFRPESSGSRSSSSSWSGASRARSQIGGRRRPHRPPGLWGESYEGNTGTSS--RD 338
Query: 1135 EENNNQSSDEQES----RRRVRRRAFIADDVDDDDEE 1037
EENNNQSSDEQES RRR RRRA I DD DDD+EE
Sbjct: 339 EENNNQSSDEQESGTRRRRRSRRRAIIDDDDDDDEEE 375
>gi|18404727|ref|NP_566784.1| uncharacterized protein [Arabidopsis thaliana]
Length = 372
Score = 268 bits (685), Expect = 2e-069
Identities = 151/214 (70%), Positives = 168/214 (78%), Gaps = 13/214 (6%)
Frame = -1
Query: 1663 DQEKNQTEAY-LSVMP*HIKEWVAVEDARGFMNAKLRSCSSESCEFNGTYSDLRKHARLQ 1487
DQEKN+ + + HIKEWV V+ AR FMN+K RSCS E+C+F+G+YSDLRKHARL
Sbjct: 165 DQEKNKPQKLTCPLCRGHIKEWVVVKAARCFMNSKHRSCSCETCDFSGSYSDLRKHARLL 224
Query: 1486 HPGVRPSEADPERQRSWRRLERQRDLGDLLSTLQSSFGGEERSSNDDGILSFDDGGWLTV 1307
HPGVRPSEADPERQRSWRRLERQ DLGDLLSTLQSSFGG+E SNDDG L F D LTV
Sbjct: 225 HPGVRPSEADPERQRSWRRLERQSDLGDLLSTLQSSFGGDE-ISNDDGFL-FADTRLLTV 282
Query: 1306 FFLIRVFRPESSGGGSRSSSWSGTSRARSHIGVRRRSSR---LWGESYEGDTGTSSRDRD 1136
+FLIRVFRPESS GSRSSSWSGTSRAR+H RRRSSR LWGESYEG+TGTS RD
Sbjct: 283 YFLIRVFRPESS--GSRSSSWSGTSRARTHTSGRRRSSRPASLWGESYEGNTGTSPRD-- 338
Query: 1135 EENNNQSSDEQES--RRRVRRRAFIADDVDDDDE 1040
E NNQSSDEQ S RRR RR + DD D+++E
Sbjct: 339 -EENNQSSDEQVSGTRRRRSRRRTVIDDDDEEEE 371
>gi|302794863|ref|XP_002979195.1| hypothetical protein SELMODRAFT_177574
[Selaginella moellendorffii]
Length = 258
Score = 263 bits (672), Expect = 6e-068
Identities = 135/193 (69%), Positives = 156/193 (80%), Gaps = 6/193 (3%)
Frame = +3
Query: 231 PAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQ 410
PA +RFRL NL PQPGSR + KRKGRG SAGQG SCGFGMRGQKSR+GP + GFEGGQ
Sbjct: 60 PAVLDRFRLHNLAPQPGSRHKNKRKGRGHSAGQGGSCGFGMRGQKSRAGPKVRPGFEGGQ 119
Query: 411 TALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRE 590
LYRRLPKL+GIAGGMRAG+PKYV VN++DI T F DG+EVSLETL K +INPSG+E
Sbjct: 120 MPLYRRLPKLKGIAGGMRAGVPKYVAVNIRDIAT-HFNDGEEVSLETLTSKRIINPSGKE 178
Query: 591 RKLPLKILG-TGELS----VKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAK 755
+KLPLK+LG G+L KL+ KAR+FS SAK KLEA+GCTL LPGRKKWV SV+K
Sbjct: 179 KKLPLKVLGDLGDLQDSSIKKLSIKARSFSASAKVKLEAAGCTLITLPGRKKWVSASVSK 238
Query: 756 NLARADEYFAKKR 794
N+ RA+EYFAKK+
Sbjct: 239 NIKRAEEYFAKKK 251
>gi|168002184|ref|XP_001753794.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 187
Score = 261 bits (666), Expect = 3e-067
Identities = 130/188 (69%), Positives = 151/188 (80%), Gaps = 1/188 (0%)
Frame = +3
Query: 243 ERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALY 422
+RFRL+NL PQPGSR R KRKGRGI+AGQGASCGFGMRGQKSRSG G+ GFEGGQ LY
Sbjct: 1 QRFRLNNLSPQPGSRHRQKRKGRGIAAGQGASCGFGMRGQKSRSGSGVRPGFEGGQMPLY 60
Query: 423 RRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLP 602
RRLPKLRGIAGGM AGLPKYV VNL DI A FE+G+EVSLE LK + ++NPSGR+RKLP
Sbjct: 61 RRLPKLRGIAGGMGAGLPKYVAVNLTDI-AASFEEGEEVSLEALKERRVLNPSGRDRKLP 119
Query: 603 LKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYF 782
LKILG GEL K+ KA A S++A+EKLE+ GC +LP +KKW+ KN +RAD YF
Sbjct: 120 LKILGDGELDFKVKVKAGAISSAAREKLESLGCEFEILPKKKKWLSAQYLKNQSRADSYF 179
Query: 783 AKKRAEAA 806
AKKR ++A
Sbjct: 180 AKKRGDSA 187
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,368,797,218,133
Number of Sequences: 15229318
Number of Extensions: 2368797218133
Number of Successful Extensions: 592660124
Number of sequences better than 0.0: 0
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