BLASTX 7.6.2
Query= UN21418 /QuerySize=913
(912 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G20225.1 | Symbols: | FUNCTIONS IN: molecular... 395 3e-110
TAIR9_protein||AT1G76020.1 | Symbols: | INVOLVED IN: biological... 314 9e-086
>TAIR9_protein||AT1G20225.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole;
CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G76020.1); Has 156 Blast hits to 152 proteins in 51 species:
Archae - 0; Bacteria - 81; Metazoa - 14; Fungi - 6; Plants - 28;
Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). |
chr1:7007966-7009318 REVERSE
Length = 234
Score = 395 bits (1013), Expect = 3e-110
Identities = 188/233 (80%), Positives = 210/233 (90%)
Frame = +2
Query: 38 MIRTALLVVALLIGTSVHAQQVPPPRRDGFVYPPGRKIEPETILIEAYFDPVCPDCGDAW 217
MIRTAL+ V +GT V AQ +PP RRDGF+YPPGRKI+ +TILIEAY DPVCPDC DAW
Sbjct: 2 MIRTALVFVVFFVGTVVQAQLIPPARRDGFLYPPGRKIDRDTILIEAYIDPVCPDCRDAW 61
Query: 218 EPLKLAVDHYGSRVALVLHLIPLPFHDNAFVVSRALHIVNTLDSNATFSLLEGIFKHQAL 397
EPLKLA+DHYGSRVALVLHLIPLPFHDNAFV SRALHIV+TL++NATF+LLEGIFKHQ L
Sbjct: 62 EPLKLAIDHYGSRVALVLHLIPLPFHDNAFVASRALHIVDTLNANATFNLLEGIFKHQTL 121
Query: 398 FYNSQTQFMPRPAVVDKLVKLGTVTLGSSFHYPLKSGFRNSQSDLATRVSFKYSVSRGVS 577
FYNSQTQ M RPAVV++L+KLGTVTLG+S+H PLKSGF NS+SDLATRVSFKYSVSRGVS
Sbjct: 122 FYNSQTQLMSRPAVVEELIKLGTVTLGNSYHSPLKSGFSNSKSDLATRVSFKYSVSRGVS 181
Query: 578 ATPTFYVNGFELPDAGSPIDFEGWKNTIDPLVNPREAKIKDTFLSFLTQPSY* 736
ATPTFYVNGFELP AGSP D+EGW++TIDPLV P+E I+DTFLSFLTQPSY*
Sbjct: 182 ATPTFYVNGFELPGAGSPKDYEGWRDTIDPLVKPQEVDIRDTFLSFLTQPSY* 234
>TAIR9_protein||AT1G76020.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cell wall, vacuole; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold
(InterPro:IPR012336); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G20225.1); Has 118 Blast hits to 116 proteins
in 37 species: Archae - 0; Bacteria - 51; Metazoa - 12; Fungi - 4;
Plants - 28; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). |
chr1:28532243-28533542 REVERSE
Length = 226
Score = 314 bits (802), Expect = 9e-086
Identities = 151/226 (66%), Positives = 181/226 (80%), Gaps = 2/226 (0%)
Frame = +2
Query: 38 MIRTALLVVALLIGTSVHAQQVPPPRRDGFVYPPGRKIEPETILIEAYFDPVCPDCGDAW 217
MIR LL + ++ T V AQ VPP R+DGFVYPPG + +P+TILIEAYFDPVCPD D+W
Sbjct: 1 MIRAVLLFLVFVVETRVQAQLVPPVRQDGFVYPPGHRFDPDTILIEAYFDPVCPDSRDSW 60
Query: 218 EPLKLAVDHYGSRVALVLHLIPLPFHDNAFVVSRALHIVNTLDSNATFSLLEGIFKHQAL 397
PLK A+ HYGSRVAL+LHL+PLP+HDNA+V SRALHIVNT+ +NATFSLLEG FKHQ+L
Sbjct: 61 PPLKQALHHYGSRVALLLHLLPLPYHDNAYVTSRALHIVNTVHANATFSLLEGFFKHQSL 120
Query: 398 FYNSQTQFMPRPAVVDKLVKLGTVTLGSSFHYPLKSGFRNSQSDLATRVSFKYSVSRGVS 577
FYN+QTQ + RPAVV+K+V+LGTV+LG+S+ LKSGF + +SD ATRVSFKYS SRGV
Sbjct: 121 FYNAQTQLLSRPAVVEKIVELGTVSLGNSYQSVLKSGFSDKKSDRATRVSFKYSASRGVY 180
Query: 578 ATPTFYVNGFELPDAGSPIDFEGWKNTIDPLVNPREAKIKDTFLSF 715
TPTFYVNGF L DA SP +F GWK IDPLV E ++D F+ F
Sbjct: 181 GTPTFYVNGFVLSDAASPSNFGGWKKIIDPLVQAHE--MEDNFIPF 224
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,173,142,472
Number of Sequences: 33410
Number of Extensions: 11173142472
Number of Successful Extensions: 370179375
Number of sequences better than 0.0: 0
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