BLASTX 7.6.2
Query= UN26104 /QuerySize=980
(979 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15230931|ref|NP_189221.1| 50S ribosomal protein L15 [Arabidop... 433 4e-119
gi|297818112|ref|XP_002876939.1| hypothetical protein ARALYDRAFT... 431 1e-118
gi|16497|emb|CAA77593.1| Plastid ribosomal protein CL15 [Arabido... 429 3e-118
gi|388448|emb|CAA77592.1| plastid ribosomal protein CL15 [Arabid... 423 2e-116
gi|225423989|ref|XP_002279311.1| PREDICTED: hypothetical protein... 364 2e-098
gi|297737813|emb|CBI27014.3| unnamed protein product [Vitis vini... 360 3e-097
gi|255581635|ref|XP_002531621.1| 50S ribosomal protein L15, puta... 355 7e-096
gi|224101737|ref|XP_002312401.1| predicted protein [Populus tric... 347 1e-093
gi|255627797|gb|ACU14243.1| unknown [Glycine max] 344 1e-092
gi|400986|sp|P31165.1|RK15_PEA RecName: Full=50S ribosomal prote... 336 3e-090
gi|189096136|pdb|3BBO|N Chain N, Homology Model For The Spinach ... 330 2e-088
gi|116790901|gb|ABK25784.1| unknown [Picea sitchensis] 319 7e-085
gi|226532984|ref|NP_001141277.1| hypothetical protein LOC1002733... 311 1e-082
gi|242041733|ref|XP_002468261.1| hypothetical protein SORBIDRAFT... 305 8e-081
gi|115451609|ref|NP_001049405.1| Os03g0219900 [Oryza sativa Japo... 300 2e-079
gi|326489899|dbj|BAJ94023.1| predicted protein [Hordeum vulgare ... 300 4e-079
gi|302794863|ref|XP_002979195.1| hypothetical protein SELMODRAFT... 263 3e-068
gi|168002184|ref|XP_001753794.1| predicted protein [Physcomitrel... 263 5e-068
gi|168001513|ref|XP_001753459.1| predicted protein [Physcomitrel... 262 1e-067
gi|302821306|ref|XP_002992316.1| hypothetical protein SELMODRAFT... 259 5e-067
>gi|15230931|ref|NP_189221.1| 50S ribosomal protein L15 [Arabidopsis thaliana]
Length = 277
Score = 433 bits (1111), Expect = 4e-119
Identities = 227/279 (81%), Positives = 244/279 (87%), Gaps = 9/279 (3%)
Frame = -1
Query: 928 MAAPLSISTNPPISRQCHRPCFPSTSFKGNVSVLEANPRQILSLKLHHKRRT-------L 770
MA PLSIS+NP SR C+R STSFKGNVSVL ANP QILSLKL+ +T
Sbjct: 1 MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60
Query: 769 PLVVFNQTSSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQ 590
PLVV +QT +++SS+ A ERFRLDNLGPQPGSRK+ KRKGRGISAGQGASCGFGMRGQ
Sbjct: 61 PLVVVSQT--AATSSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQ 118
Query: 589 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVS 410
KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMR+GLPKY+PVN+KDIETAGF++GDEVS
Sbjct: 119 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVS 178
Query: 409 LETLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPG 230
LETLK KGLINPSGRERKLPLKILGTGELS+KL FKARAFST AKEKLEASGCTLTVLPG
Sbjct: 179 LETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPG 238
Query: 229 RKKWVKPSVAKNLARADEYFAKKRADAATAASSEPATSA 113
RKKWVKPSVAKN ARADEYFAKKRA AA AA+SEPA SA
Sbjct: 239 RKKWVKPSVAKNQARADEYFAKKRAAAAEAATSEPAASA 277
>gi|297818112|ref|XP_002876939.1| hypothetical protein ARALYDRAFT_484358
[Arabidopsis lyrata subsp. lyrata]
Length = 275
Score = 431 bits (1106), Expect = 1e-118
Identities = 227/278 (81%), Positives = 243/278 (87%), Gaps = 11/278 (3%)
Frame = -1
Query: 928 MAAPLSISTNPPISRQCHRPCFPSTSFKGNVSVLEANPRQILSLKLHHKRRT-------L 770
MA PLSIS+NP S +C+R FPSTSFKGNVSVL ANP QILSLKL+ K +T
Sbjct: 1 MATPLSISSNPLTSHRCYRLHFPSTSFKGNVSVLGANPSQILSLKLNQKLKTRKQQQSAR 60
Query: 769 PLVVFNQTSSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQ 590
PLVV +Q +++S +P ERFRLDNLGPQPGSRKR KRKGRGISAGQGASCGFGMRGQ
Sbjct: 61 PLVVVSQAAATSEVVAP---ERFRLDNLGPQPGSRKRQKRKGRGISAGQGASCGFGMRGQ 117
Query: 589 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVS 410
KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMR+GLPKY+PVNLKDIETAGF++GDEVS
Sbjct: 118 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNLKDIETAGFQEGDEVS 177
Query: 409 LETLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPG 230
LETLK KGLINPSGRERKLPLKILGTGELS+KL FKARAFST AKEKLEASGCTLTVLPG
Sbjct: 178 LETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPG 237
Query: 229 RKKWVKPSVAKNLARADEYFAKKRADAATAASSEPATS 116
RKKWVKPSVAKN ARADEYFAKKRA AA A+SEPA S
Sbjct: 238 RKKWVKPSVAKNQARADEYFAKKRA-AAAEATSEPAAS 274
>gi|16497|emb|CAA77593.1| Plastid ribosomal protein CL15 [Arabidopsis thaliana]
Length = 277
Score = 429 bits (1103), Expect = 3e-118
Identities = 226/279 (81%), Positives = 243/279 (87%), Gaps = 9/279 (3%)
Frame = -1
Query: 928 MAAPLSISTNPPISRQCHRPCFPSTSFKGNVSVLEANPRQILSLKLHHKRRT-------L 770
MA PLSIS+NP SR C+R STSFKGNVSVL ANP QILSLKL+ +T
Sbjct: 1 MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60
Query: 769 PLVVFNQTSSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQ 590
PLVV +QT +++SS+ A ERFRLDNLGPQPGSRK+ KRKGRGISAGQGASCGFGMRGQ
Sbjct: 61 PLVVVSQT--AATSSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQ 118
Query: 589 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVS 410
KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMR+GLPKY+PVN+KDIETAGF++GDEVS
Sbjct: 119 KSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVS 178
Query: 409 LETLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPG 230
LETLK KGLINPSGRERKLPLKILGTGELS+KL FKARAFST AKEKLEASGCTLTVLP
Sbjct: 179 LETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPE 238
Query: 229 RKKWVKPSVAKNLARADEYFAKKRADAATAASSEPATSA 113
RKKWVKPSVAKN ARADEYFAKKRA AA AA+SEPA SA
Sbjct: 239 RKKWVKPSVAKNQARADEYFAKKRAAAAEAATSEPAASA 277
>gi|388448|emb|CAA77592.1| plastid ribosomal protein CL15 [Arabidopsis
thaliana]
Length = 273
Score = 423 bits (1087), Expect = 2e-116
Identities = 223/275 (81%), Positives = 240/275 (87%), Gaps = 9/275 (3%)
Frame = -1
Query: 916 LSISTNPPISRQCHRPCFPSTSFKGNVSVLEANPRQILSLKLHHKRRT-------LPLVV 758
LSIS+NP SR C+R STSFKGNVSVL ANP QILSLKL+ +T PLVV
Sbjct: 1 LSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFARPLVV 60
Query: 757 FNQTSSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRS 578
+QT +++SS+ A ERFRLDNLGPQPGSRK+ KRKGRGISAGQGASCGFGMRGQKSRS
Sbjct: 61 VSQT--AATSSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQKSRS 118
Query: 577 GPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETL 398
GPGIMRGFEGGQTALYRRLPKLRGIAGGMR+GLPKY+PVN+KDIETAGF++GDEVSLETL
Sbjct: 119 GPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLETL 178
Query: 397 KLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKW 218
K KGLINPSGRERKLPLKILGTGELS+KL FKARAFST AKEKLEASGCTLTVLP RKKW
Sbjct: 179 KQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPERKKW 238
Query: 217 VKPSVAKNLARADEYFAKKRADAATAASSEPATSA 113
VKPSVAKN ARADEYFAKKRA AA AA+SEPA SA
Sbjct: 239 VKPSVAKNQARADEYFAKKRAAAAEAATSEPAASA 273
>gi|225423989|ref|XP_002279311.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 299
Score = 364 bits (933), Expect = 2e-098
Identities = 192/271 (70%), Positives = 219/271 (80%), Gaps = 9/271 (3%)
Frame = -1
Query: 937 SPNMAAPLSISTNPPISRQCHRPCF---PSTSFKGNVSVLEANPRQILSLKLHHKRRTLP 767
S MAA LS+S+ P P F PS+ FKGNV L+ANP Q L++KL K +
Sbjct: 35 SSPMAALLSVSSAP----SSRTPLFLHHPSSPFKGNVRNLKANPCQFLTIKLEVKEKVRK 90
Query: 766 LVVFNQTSSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQK 587
V +S S SS + RFRLDNLGPQPGSRK+AKRKGRGISAGQG SCGFGMRGQK
Sbjct: 91 SGVV--VASQGSPSSVVDNVRFRLDNLGPQPGSRKKAKRKGRGISAGQGNSCGFGMRGQK 148
Query: 586 SRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSL 407
SRSGPG+M+GFEGGQ LYRR+PKLRGIAGGM AGLPKYVPVNLKDIE AGF++G+EVSL
Sbjct: 149 SRSGPGVMKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSL 208
Query: 406 ETLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGR 227
++LK KGLINPSGRER+LPLKILG G+LSVKLN KARAFS+SAKEKLEA+GC++TVLPGR
Sbjct: 209 DSLKKKGLINPSGRERRLPLKILGAGDLSVKLNIKARAFSSSAKEKLEAAGCSITVLPGR 268
Query: 226 KKWVKPSVAKNLARADEYFAKKRADAATAAS 134
KKW+KPSV KNLARA+EYFAKKRA A A+S
Sbjct: 269 KKWLKPSVIKNLARAEEYFAKKRAAAEQASS 299
>gi|297737813|emb|CBI27014.3| unnamed protein product [Vitis vinifera]
Length = 262
Score = 360 bits (922), Expect = 3e-097
Identities = 188/264 (71%), Positives = 215/264 (81%), Gaps = 9/264 (3%)
Frame = -1
Query: 916 LSISTNPPISRQCHRPCF---PSTSFKGNVSVLEANPRQILSLKLHHKRRTLPLVVFNQT 746
LS+S+ P P F PS+ FKGNV L+ANP Q L++KL K + V
Sbjct: 5 LSVSSAP----SSRTPLFLHHPSSPFKGNVRNLKANPCQFLTIKLEVKEKVRKSGVV--V 58
Query: 745 SSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGI 566
+S S SS + RFRLDNLGPQPGSRK+AKRKGRGISAGQG SCGFGMRGQKSRSGPG+
Sbjct: 59 ASQGSPSSVVDNVRFRLDNLGPQPGSRKKAKRKGRGISAGQGNSCGFGMRGQKSRSGPGV 118
Query: 565 MRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKG 386
M+GFEGGQ LYRR+PKLRGIAGGM AGLPKYVPVNLKDIE AGF++G+EVSL++LK KG
Sbjct: 119 MKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLDSLKKKG 178
Query: 385 LINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPS 206
LINPSGRER+LPLKILG G+LSVKLN KARAFS+SAKEKLEA+GC++TVLPGRKKW+KPS
Sbjct: 179 LINPSGRERRLPLKILGAGDLSVKLNIKARAFSSSAKEKLEAAGCSITVLPGRKKWLKPS 238
Query: 205 VAKNLARADEYFAKKRADAATAAS 134
V KNLARA+EYFAKKRA A A+S
Sbjct: 239 VIKNLARAEEYFAKKRAAAEQASS 262
>gi|255581635|ref|XP_002531621.1| 50S ribosomal protein L15, putative [Ricinus
communis]
Length = 263
Score = 355 bits (910), Expect = 7e-096
Identities = 183/251 (72%), Positives = 213/251 (84%), Gaps = 5/251 (1%)
Frame = -1
Query: 865 FPSTSFKGNVSVLEANPRQILSLKLHH--KRRTLPLVVFNQTSSSSSSSSPAASE--RFR 698
+PS+ FKGN++ L ++ L ++ + T LVV NQ S+++++ +AS RFR
Sbjct: 11 YPSSHFKGNLTSLRLKTCTLIPLNFNNAKPKGTQQLVVINQARSTAAAAIQSASSGVRFR 70
Query: 697 LDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLP 518
LDNLGPQ GSRKR KRKGRGI+AGQG SCGFGMRGQKSRSGPG+ +GFEGGQ LYRR+P
Sbjct: 71 LDNLGPQRGSRKRGKRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIP 130
Query: 517 KLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKIL 338
KLRGIAGGM AGLPK+VPVNLKDIE AGF++G+EVSLETLK KGLINPSGRER+LPLKIL
Sbjct: 131 KLRGIAGGMHAGLPKFVPVNLKDIEAAGFQEGEEVSLETLKEKGLINPSGRERRLPLKIL 190
Query: 337 GTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKR 158
G GELSVK+N KARAFSTSAKEKLEA+GC+LTVLPGRKKWVKPSVAKNLARA+EYFAKK+
Sbjct: 191 GDGELSVKVNIKARAFSTSAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKK 250
Query: 157 ADAATAASSEP 125
A AA AA+SEP
Sbjct: 251 A-AAAAAASEP 260
>gi|224101737|ref|XP_002312401.1| predicted protein [Populus trichocarpa]
Length = 256
Score = 347 bits (890), Expect = 1e-093
Identities = 179/247 (72%), Positives = 204/247 (82%), Gaps = 3/247 (1%)
Frame = -1
Query: 871 PCFPSTSFKGNVSVLEANPRQILSLKLHHKRRTLPLVVFNQTSSSSSSSSPAASERFRLD 692
PC PS+ FKGN++ L+ L LH K + P VV NQ ++ S ++ ++ R RLD
Sbjct: 11 PC-PSSPFKGNLTRLKPKTCNFTCLTLHSKNKR-PSVVVNQAAAPSVVTT-SSGARLRLD 67
Query: 691 NLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKL 512
NLGPQPGSRK+ KRKGRGISAGQG SCGFGMRGQKSRSGPG+ +GFEGGQ LYRR+PKL
Sbjct: 68 NLGPQPGSRKKGKRKGRGISAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKL 127
Query: 511 RGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGT 332
RGIAGGM AGLPKYVPVNLKDI +AGF++G EVSLETLK KGLINPSGRER+LPLK+LG
Sbjct: 128 RGIAGGMHAGLPKYVPVNLKDIASAGFQEGAEVSLETLKEKGLINPSGRERRLPLKVLGD 187
Query: 331 GELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRAD 152
GELSVKLN KARAFS +AKEKLEA+GC+LTVLPGRKKWVKPSVAKNLARA+EYFAKKRA
Sbjct: 188 GELSVKLNIKARAFSAAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKRAA 247
Query: 151 AATAASS 131
A + S
Sbjct: 248 AIVSEPS 254
>gi|255627797|gb|ACU14243.1| unknown [Glycine max]
Length = 256
Score = 344 bits (882), Expect = 1e-092
Identities = 181/247 (73%), Positives = 200/247 (80%), Gaps = 4/247 (1%)
Frame = -1
Query: 871 PCFPSTSFKGNVSVLEANPRQILSLKLHHKRRTLPLVVFNQTSSSSSSSSPAASERFRLD 692
P P + FKG V L A P LK + R L VV S SS ++P+ RFRLD
Sbjct: 13 PWRPLSPFKGTVKTLVAKP----WLKKIQQARPLISVVNKAASLSSPVTAPSVGVRFRLD 68
Query: 691 NLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKL 512
NLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPG+ +GFEGGQ LYRR+PKL
Sbjct: 69 NLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKL 128
Query: 511 RGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGT 332
RGIAGGM AGLPKYV VNL+DIE A F++G+EVSLE+LK KG+INPSGRER+LPLKILG
Sbjct: 129 RGIAGGMHAGLPKYVHVNLRDIEDAKFKEGEEVSLESLKAKGVINPSGRERRLPLKILGE 188
Query: 331 GELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRAD 152
GELS KL KARAFSTSAKEKLE +GC+LTVLPGRKKWVKPSVAKNLARADEYFAKKRA
Sbjct: 189 GELSKKLTLKARAFSTSAKEKLENAGCSLTVLPGRKKWVKPSVAKNLARADEYFAKKRAM 248
Query: 151 AATAASS 131
AA+ +S
Sbjct: 249 AASEPAS 255
>gi|400986|sp|P31165.1|RK15_PEA RecName: Full=50S ribosomal protein L15,
chloroplastic; AltName: Full=CL15; Flags: Precursor
Length = 258
Score = 336 bits (861), Expect = 3e-090
Identities = 178/245 (72%), Positives = 196/245 (80%), Gaps = 3/245 (1%)
Frame = -1
Query: 859 STSFKGNVSVLEANPRQILSLKLHHKRRTLPLVVFNQTSSSSSSSSPAASERFRLDNLGP 680
++ FKGNV L A P LK+ +R L + V N+ +S+ + S + RFRLDNLGP
Sbjct: 16 ASPFKGNVKTLVAKPCLCPCLKI--QRTKLRVSVVNKAASAYNVKSSGENVRFRLDNLGP 73
Query: 679 QPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIA 500
QPGSRKR KRKGRGI+AGQGASCGFGMRGQKSRSGPGIMRGFEGGQ LYRRLPKLRGIA
Sbjct: 74 QPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGIA 133
Query: 499 GGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGTGELS 320
GGM AGLPKYV VNL DIE AGF+DG+EVSLETLK K +INPSGRERKLPLKIL GELS
Sbjct: 134 GGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPSGRERKLPLKILADGELS 193
Query: 319 VKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRADAATA 140
KL KA AFSTSAKEKLE +GC+L VLPGRKKWVKPSVAKNLARA+EYFAKKR TA
Sbjct: 194 KKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKNLARAEEYFAKKRG-GETA 252
Query: 139 ASSEP 125
+ P
Sbjct: 253 SEPAP 257
>gi|189096136|pdb|3BBO|N Chain N, Homology Model For The Spinach Chloroplast 50s
Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 257
Score = 330 bits (845), Expect = 2e-088
Identities = 177/245 (72%), Positives = 195/245 (79%), Gaps = 4/245 (1%)
Frame = -1
Query: 859 STSFKGNVSVLEANPRQILSLKLHHKRRTLPLVVFNQTSSSSSSSSPAASERFRLDNLGP 680
++ FKGNV L A P LK+ +R L + V N+ +S+ + S + FRLDNLGP
Sbjct: 16 ASPFKGNVKTLVAKPCLCPCLKI--QRTKLRVSVVNKAASAYNVKS-SGENVFRLDNLGP 72
Query: 679 QPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIA 500
QPGSRKR KRKGRGI+AGQGASCGFGMRGQKSRSGPGIMRGFEGGQ LYRRLPKLRGIA
Sbjct: 73 QPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGIA 132
Query: 499 GGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGTGELS 320
GGM AGLPKYV VNL DIE AGF+DG+EVSLETLK K +INPSGRERKLPLKIL GELS
Sbjct: 133 GGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPSGRERKLPLKILADGELS 192
Query: 319 VKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRADAATA 140
KL KA AFSTSAKEKLE +GC+L VLPGRKKWVKPSVAKNLARA+EYFAKKR TA
Sbjct: 193 KKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKNLARAEEYFAKKRG-GETA 251
Query: 139 ASSEP 125
+ P
Sbjct: 252 SEPAP 256
>gi|116790901|gb|ABK25784.1| unknown [Picea sitchensis]
Length = 263
Score = 319 bits (815), Expect = 7e-085
Identities = 170/266 (63%), Positives = 204/266 (76%), Gaps = 12/266 (4%)
Frame = -1
Query: 922 APLSISTNPPISRQCHRPCFPSTSFKGNV------SVLEANPR-QILSLKLHHKRRTLPL 764
A +IS ++ PC +FKGN S+ + PR Q+ KL R+ + +
Sbjct: 2 AMAAISALSIVASNSLNPC----AFKGNAGNVRRGSLFASFPRLQVPHTKL-GLRKHIQI 56
Query: 763 VVFNQTSSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKS 584
V Q ++ + +S ++ RFRLDNLGPQ GSRKR KRKGRG +AGQG SCGFGMRGQKS
Sbjct: 57 GVICQAGATVTETSSSSIGRFRLDNLGPQRGSRKRNKRKGRGHAAGQGGSCGFGMRGQKS 116
Query: 583 RSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLE 404
RSGPG+ GFEGGQ LYRR+PKLRGI+GGM AGLPKYVPVNL+DIE AGF+DG+EVSLE
Sbjct: 117 RSGPGVRHGFEGGQMPLYRRIPKLRGISGGMGAGLPKYVPVNLEDIEAAGFKDGEEVSLE 176
Query: 403 TLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRK 224
+LK KGLINPSGRER+LPLKILG GEL+ KL KARAFS+SAK+KLE++GCTL LPGRK
Sbjct: 177 SLKSKGLINPSGRERRLPLKILGDGELTKKLTIKARAFSSSAKQKLESNGCTLITLPGRK 236
Query: 223 KWVKPSVAKNLARADEYFAKKRADAA 146
KWVKPSV K+LARADEYFA+KRA+A+
Sbjct: 237 KWVKPSVVKHLARADEYFARKRAEAS 262
>gi|226532984|ref|NP_001141277.1| hypothetical protein LOC100273366 [Zea mays]
Length = 267
Score = 311 bits (796), Expect = 1e-082
Identities = 165/265 (62%), Positives = 200/265 (75%), Gaps = 4/265 (1%)
Frame = -1
Query: 922 APLSISTNPPISRQCHRPCFPSTSF--KGNVSVLEANPRQILSLKLHHKRRTLPLVVFNQ 749
A +++ + P + H P F S+S G ++ A PR + L +R T +V +
Sbjct: 2 ASITLLSLAPTAIFLHIPAFTSSSVVGPGILAGRWAAPRALPLRALPPRRVT--VVCSSA 59
Query: 748 TSSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPG 569
+++ +S + A E+FRLDNLGPQ GSR+R KRKGRGI+AGQGASCGFGMRGQKSRSGPG
Sbjct: 60 AAAAEASDAAAPVEKFRLDNLGPQKGSRRRPKRKGRGIAAGQGASCGFGMRGQKSRSGPG 119
Query: 568 IMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLK 389
+ RGFEGGQ LYRRLPKLRGIAGGM GLPKYVP NLKDI GF+DGDE+SLE+LK +
Sbjct: 120 VRRGFEGGQMPLYRRLPKLRGIAGGMHIGLPKYVPFNLKDIVRGGFKDGDEISLESLKSR 179
Query: 388 GLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKP 209
GLINPSGRERKLPLKILG G++SVKLN KA AFS SAKEKLEA+GC+LT+LP RKKW+
Sbjct: 180 GLINPSGRERKLPLKILGDGDVSVKLNIKAGAFSASAKEKLEAAGCSLTLLPKRKKWLPQ 239
Query: 208 SVAKNLARADEYFAKKRADAATAAS 134
+ KN ARA+EYFAKK+A A + S
Sbjct: 240 NYLKNQARAEEYFAKKKAGAGESDS 264
>gi|242041733|ref|XP_002468261.1| hypothetical protein SORBIDRAFT_01g042610
[Sorghum bicolor]
Length = 269
Score = 305 bits (780), Expect = 8e-081
Identities = 161/265 (60%), Positives = 194/265 (73%), Gaps = 2/265 (0%)
Frame = -1
Query: 922 APLSISTNPPISRQCHRPCFPSTS-FKGNVSVLEANPRQILSLKLHHK-RRTLPLVVFNQ 749
A +++ + P + H P S+S F +L +L L + R + +V
Sbjct: 2 ASITLLSLAPTATFLHIPASTSSSPFVAAPGILAGRRAASRALPLRARPPRRITVVCSAA 61
Query: 748 TSSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPG 569
+++ +S + A E+FRLDNLGPQ GSR+R KRKGRGI+AGQGASCGFGMRGQKSRSGPG
Sbjct: 62 AAAAEASDAAAPVEKFRLDNLGPQKGSRRRPKRKGRGIAAGQGASCGFGMRGQKSRSGPG 121
Query: 568 IMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLK 389
+ RGFEGGQ LYRRLPKLRGIAGGM GLPKYV NLKDI GF+DGDE+SLETLK +
Sbjct: 122 VRRGFEGGQMPLYRRLPKLRGIAGGMHIGLPKYVAFNLKDIVRGGFKDGDEISLETLKSR 181
Query: 388 GLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKP 209
GLINPSGRERKLPLKILG G++SVKLN KA AFS SAKEKLEA+GC+LT+LP RKKW+
Sbjct: 182 GLINPSGRERKLPLKILGDGDVSVKLNIKAGAFSASAKEKLEAAGCSLTLLPKRKKWLSQ 241
Query: 208 SVAKNLARADEYFAKKRADAATAAS 134
+ KN ARA+EYFAKK+ A + S
Sbjct: 242 NYLKNQARAEEYFAKKKGGAGESDS 266
>gi|115451609|ref|NP_001049405.1| Os03g0219900 [Oryza sativa Japonica Group]
Length = 263
Score = 300 bits (768), Expect = 2e-079
Identities = 149/218 (68%), Positives = 177/218 (81%), Gaps = 2/218 (0%)
Frame = -1
Query: 802 SLKLHHKRRTLPLVVFNQTSSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQ 623
S+ L + R VV + ++ ++ + PA E+FRLDNLGPQ GSR+R KRKGRGI+AGQ
Sbjct: 40 SVVLRARPRRCVTVVCSAAAAEAAEAEPA--EKFRLDNLGPQKGSRRRPKRKGRGIAAGQ 97
Query: 622 GASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIE 443
GASCGFGMRGQKSRSGPG+ RGFEGGQ LYRR+PKLRGIAGGM GLPKYVP NL+D+
Sbjct: 98 GASCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRIPKLRGIAGGMHIGLPKYVPFNLRDLA 157
Query: 442 TAGFEDGDEVSLETLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLE 263
GF+DGDE+SLE+LK +GLINPSGRERKLPLKILG G++SVKLN KA AFS SAKEKLE
Sbjct: 158 RGGFKDGDEISLESLKSRGLINPSGRERKLPLKILGDGDVSVKLNIKAGAFSASAKEKLE 217
Query: 262 ASGCTLTVLPGRKKWVKPSVAKNLARADEYFAKKRADA 149
A+GCTL+++P RKKW+ S KN ARA+EYF+KK A
Sbjct: 218 AAGCTLSLVPKRKKWLPQSYLKNQARAEEYFSKKNGGA 255
>gi|326489899|dbj|BAJ94023.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 261
Score = 300 bits (766), Expect = 4e-079
Identities = 155/249 (62%), Positives = 183/249 (73%), Gaps = 6/249 (2%)
Frame = -1
Query: 895 PISRQCHRPCFPSTSFKGNVSVLEANPRQILSLKLHHKRRTLPLVVFNQTSSSSSSSSPA 716
P + H P ++S + R+ L L+ RR S++ +S
Sbjct: 11 PAATFLHLPASTASSSRFAAIPRSLAGRRALLLRARAPRRV------TVVCSAAETSEAE 64
Query: 715 ASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTA 536
E+FRLDNL PQ G+R++ KRKGRGISAGQGASCGFGMRGQKSRSGPG+ RGFEGGQ
Sbjct: 65 PVEKFRLDNLSPQKGARRKPKRKGRGISAGQGASCGFGMRGQKSRSGPGVRRGFEGGQMP 124
Query: 535 LYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERK 356
LYRRLPKLRGIAGGM GLPKYVP NL+DI GF+DGDE+SLE+LK +GLINPSGRERK
Sbjct: 125 LYRRLPKLRGIAGGMHIGLPKYVPFNLRDIVQGGFKDGDEISLESLKSRGLINPSGRERK 184
Query: 355 LPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADE 176
LPLKILG G+LSVKLN KA AFS++AKEKLEA+GCTLTVLP RKKW+ + KN ARA+E
Sbjct: 185 LPLKILGDGDLSVKLNIKAGAFSSAAKEKLEAAGCTLTVLPKRKKWLPAAYVKNQARAEE 244
Query: 175 YFAKKRADA 149
YF+KK+ A
Sbjct: 245 YFSKKKGGA 253
>gi|302794863|ref|XP_002979195.1| hypothetical protein SELMODRAFT_177574
[Selaginella moellendorffii]
Length = 258
Score = 263 bits (672), Expect = 3e-068
Identities = 135/193 (69%), Positives = 156/193 (80%), Gaps = 6/193 (3%)
Frame = -1
Query: 721 PAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQ 542
PA +RFRL NL PQPGSR + KRKGRG SAGQG SCGFGMRGQKSR+GP + GFEGGQ
Sbjct: 60 PAVLDRFRLHNLAPQPGSRHKNKRKGRGHSAGQGGSCGFGMRGQKSRAGPKVRPGFEGGQ 119
Query: 541 TALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRE 362
LYRRLPKL+GIAGGMRAG+PKYV VN++DI T F DG+EVSLETL K +INPSG+E
Sbjct: 120 MPLYRRLPKLKGIAGGMRAGVPKYVAVNIRDIAT-HFNDGEEVSLETLTSKRIINPSGKE 178
Query: 361 RKLPLKILG-TGELS----VKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAK 197
+KLPLK+LG G+L KL+ KAR+FS SAK KLEA+GCTL LPGRKKWV SV+K
Sbjct: 179 KKLPLKVLGDLGDLQDSSIKKLSIKARSFSASAKVKLEAAGCTLITLPGRKKWVSASVSK 238
Query: 196 NLARADEYFAKKR 158
N+ RA+EYFAKK+
Sbjct: 239 NIKRAEEYFAKKK 251
>gi|168002184|ref|XP_001753794.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 187
Score = 263 bits (670), Expect = 5e-068
Identities = 131/188 (69%), Positives = 151/188 (80%), Gaps = 1/188 (0%)
Frame = -1
Query: 709 ERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALY 530
+RFRL+NL PQPGSR R KRKGRGI+AGQGASCGFGMRGQKSRSG G+ GFEGGQ LY
Sbjct: 1 QRFRLNNLSPQPGSRHRQKRKGRGIAAGQGASCGFGMRGQKSRSGSGVRPGFEGGQMPLY 60
Query: 529 RRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLP 350
RRLPKLRGIAGGM AGLPKYV VNL DI A FE+G+EVSLE LK + ++NPSGR+RKLP
Sbjct: 61 RRLPKLRGIAGGMGAGLPKYVAVNLTDI-AASFEEGEEVSLEALKERRVLNPSGRDRKLP 119
Query: 349 LKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARADEYF 170
LKILG GEL K+ KA A S++A+EKLE+ GC +LP +KKW+ KN +RAD YF
Sbjct: 120 LKILGDGELDFKVKVKAGAISSAAREKLESLGCEFEILPKKKKWLSAQYLKNQSRADSYF 179
Query: 169 AKKRADAA 146
AKKR D+A
Sbjct: 180 AKKRGDSA 187
>gi|168001513|ref|XP_001753459.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 237
Score = 262 bits (667), Expect = 1e-067
Identities = 132/211 (62%), Positives = 157/211 (74%), Gaps = 1/211 (0%)
Frame = -1
Query: 781 RRTLPLVVFNQTSSSSSSSSPAASERFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFG 602
R+ L +V + ++ + +RFRL+NL PQPGSR R KRKGRGI+AGQGASCGFG
Sbjct: 27 RKELTVVANGRKAAVVTKDENEVDQRFRLNNLSPQPGSRHRQKRKGRGIAAGQGASCGFG 86
Query: 601 MRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDG 422
MRGQKSRSG G+ GFEGGQ LYRRLPKLRGIAGGM AGLPKYV VNL DI A F++G
Sbjct: 87 MRGQKSRSGSGVRPGFEGGQMPLYRRLPKLRGIAGGMGAGLPKYVAVNLTDI-AASFQEG 145
Query: 421 DEVSLETLKLKGLINPSGRERKLPLKILGTGELSVKLNFKARAFSTSAKEKLEASGCTLT 242
+EVSLE LK + ++NPSGR+ KLPLK+LG GEL ++ KA A S +AKEKLE GC
Sbjct: 146 EEVSLEALKERRVLNPSGRDSKLPLKVLGDGELDFRVKIKAGAISAAAKEKLEKLGCECE 205
Query: 241 VLPGRKKWVKPSVAKNLARADEYFAKKRADA 149
+LP +KKWV +KN ARAD YFAKKR D+
Sbjct: 206 ILPKKKKWVSAQYSKNQARADAYFAKKRGDS 236
>gi|302821306|ref|XP_002992316.1| hypothetical protein SELMODRAFT_135109
[Selaginella moellendorffii]
Length = 194
Score = 259 bits (661), Expect = 5e-067
Identities = 133/188 (70%), Positives = 153/188 (81%), Gaps = 6/188 (3%)
Frame = -1
Query: 706 RFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYR 527
RFRL NL PQPGSR + KRKGRG SAGQG SCGFGMRGQKSR+GP + GFEGGQ LYR
Sbjct: 1 RFRLHNLAPQPGSRHKNKRKGRGHSAGQGGSCGFGMRGQKSRAGPKVRPGFEGGQMPLYR 60
Query: 526 RLPKLRGIAGGMRAGLPKYVPVNLKDIETAGFEDGDEVSLETLKLKGLINPSGRERKLPL 347
RLPKL+GIAGGMRAG+PKYV VN++DI T F DG+EVSLETL K +INPSG+E+KLPL
Sbjct: 61 RLPKLKGIAGGMRAGVPKYVAVNIRDIAT-HFNDGEEVSLETLTSKRIINPSGKEKKLPL 119
Query: 346 KILG-TGELS----VKLNFKARAFSTSAKEKLEASGCTLTVLPGRKKWVKPSVAKNLARA 182
K+LG G+L KL+ KAR+FS SAK KLEA+GCTL LPGRKKWV SV+KN+ RA
Sbjct: 120 KVLGDLGDLQDSSIKKLSIKARSFSASAKVKLEAAGCTLITLPGRKKWVSASVSKNIKRA 179
Query: 181 DEYFAKKR 158
+EYFAKK+
Sbjct: 180 EEYFAKKK 187
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,162,061,699,944
Number of Sequences: 15229318
Number of Extensions: 3162061699944
Number of Successful Extensions: 736907132
Number of sequences better than 0.0: 0
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