BLASTX 7.6.2
Query= UN27896 /QuerySize=1154
(1153 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabido... 255 7e-067
sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabido... 224 1e-057
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabido... 171 1e-041
sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic ... 170 2e-041
sp|Q6CDH3|PABP_YARLI Polyadenylate-binding protein, cytoplasmic ... 167 2e-040
sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic ... 166 3e-040
sp|P21187|PABP_DROME Polyadenylate-binding protein OS=Drosophila... 164 1e-039
sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic ... 163 2e-039
sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic ... 163 2e-039
sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic ... 163 4e-039
sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenop... 162 5e-039
sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic ... 162 5e-039
sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic ... 162 5e-039
sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sa... 161 8e-039
sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic ... 161 1e-038
sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein OS=... 159 5e-038
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau... 159 5e-038
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa... 159 5e-038
sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus mus... 159 5e-038
sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus no... 159 5e-038
>sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabidopsis thaliana
GN=PAB5 PE=1 SV=2
Length = 668
Score = 255 bits (649), Expect = 7e-067
Identities = 134/166 (80%), Positives = 143/166 (86%), Gaps = 7/166 (4%)
Frame = -1
Query: 478 MVDQV-PNQPASTVAS----PHATQVAAV--AAAAAEALQTHPNSSLYVGDLDQSVNEAH 320
MVDQV PNQP A+ P +QVAAV AAAAAEALQTHPNSSLYVGDLD SVNE+H
Sbjct: 1 MVDQVIPNQPTVAAAAPPPFPAVSQVAAVAAAAAAAEALQTHPNSSLYVGDLDPSVNESH 60
Query: 319 LLDLFNQVAPVQTVRVCRDLTRRSLGYAYVNFANPDDAMRAMDILNYTPIRERPIRIMRS 140
LLDLFNQVAPV +RVCRDLT RSLGYAYVNFANP+DA RAM+ LNY PIR+RPIRIM S
Sbjct: 61 LLDLFNQVAPVHNLRVCRDLTHRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLS 120
Query: 139 NRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTILSCNVAMD 2
NRDPSTRLSGKGNVFIKNLD +IDNKALY+TFSSFGTILSC VAMD
Sbjct: 121 NRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMD 166
>sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabidopsis thaliana
GN=PAB3 PE=2 SV=1
Length = 660
Score = 224 bits (569), Expect = 1e-057
Identities = 116/170 (68%), Positives = 132/170 (77%), Gaps = 3/170 (1%)
Frame = -1
Query: 511 AVASGIAPTTAMVDQVPNQPASTVASPHATQVAAVAAAAAEALQTHPNSSLYVGDLDQSV 332
AVA+G+AP T MVDQVP+ A T S + + A QTHPNSSLY GDLD V
Sbjct: 4 AVATGVAPAT-MVDQVPSPTAQT--SVQVPVSIPLPSPVVVADQTHPNSSLYAGDLDPKV 60
Query: 331 NEAHLLDLFNQVAPVQTVRVCRDLTRRSLGYAYVNFANPDDAMRAMDILNYTPIRERPIR 152
EAHL DLF VA V +VRVCRD RRSLGYAY+NF+NP+DA RAM+ LNYTP+ +RPIR
Sbjct: 61 TEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIR 120
Query: 151 IMRSNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTILSCNVAMD 2
IM SNRDPSTRLSGKGN+FIKNLD +IDNKAL++TFSSFGTILSC VAMD
Sbjct: 121 IMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMD 170
>sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana
GN=PAB2 PE=1 SV=1
Length = 629
Score = 171 bits (432), Expect = 1e-041
Identities = 91/157 (57%), Positives = 108/157 (68%), Gaps = 8/157 (5%)
Frame = -1
Query: 469 QVPNQPASTVASPHATQVAAVAAAAAEALQTHPNSSLYVGDLDQSVNEAHLLDLFNQVAP 290
Q PN + V S AT A A N+SLYVGDLD +V ++ L D F Q+
Sbjct: 9 QTPNGSTAAVTSAPATSGGATATQFG-------NTSLYVGDLDFNVTDSQLFDAFGQMGT 61
Query: 289 VQTVRVCRDL-TRRSLGYAYVNFANPDDAMRAMDILNYTPIRERPIRIMRSNRDPSTRLS 113
V TVRVCRDL TRRSLGY YVNF NP DA RA+ LNY P+ +PIR+M S+RDPS R S
Sbjct: 62 VVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRS 121
Query: 112 GKGNVFIKNLDGTIDNKALYDTFSSFGTILSCNVAMD 2
G GN+FIKNLD +ID+KAL+DTFSSFG I+SC VA+D
Sbjct: 122 GAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVD 158
>sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Schizosaccharomyces pombe GN=pab1 PE=1 SV=2
Length = 653
Score = 170 bits (430), Expect = 2e-041
Identities = 92/170 (54%), Positives = 113/170 (66%), Gaps = 2/170 (1%)
Frame = -1
Query: 505 ASGIAPTTAMVDQVPNQPASTVASPHATQVAAVAAAAAEALQTHPNS-SLYVGDLDQSVN 329
+S T ++ +P + +T A++ A T P S SLYVG+LD SV
Sbjct: 33 SSNTPSTETQPEKKAEEPEAAAEPSESTSTPTNASSVATPSGTAPTSASLYVGELDPSVT 92
Query: 328 EAHLLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPDDAMRAMDILNYTPIRERPIR 152
EA L +LFN + PV ++RVCRD +TRRSLGYAYVNF N +D +A+D LNYT I+ RP R
Sbjct: 93 EAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDELNYTLIKGRPCR 152
Query: 151 IMRSNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTILSCNVAMD 2
IM S RDPS R G GNVFIKNLD IDNKAL+DTFS+FG ILSC VA+D
Sbjct: 153 IMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVD 202
>sp|Q6CDH3|PABP_YARLI Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Yarrowia lipolytica GN=PAB1 PE=3 SV=1
Length = 629
Score = 167 bits (422), Expect = 2e-040
Identities = 81/124 (65%), Positives = 100/124 (80%), Gaps = 1/124 (0%)
Frame = -1
Query: 370 NSSLYVGDLDQSVNEAHLLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPDDAMRAM 194
N+SLYVG+LD SV EA L ++FN + PV +VRVCRD +TRRSLGYAYVNF N D +RA+
Sbjct: 45 NASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADGIRAL 104
Query: 193 DILNYTPIRERPIRIMRSNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTILSCN 14
+ LNY+PI+ERP RIM S RDP+ R +G GN++IKNLD IDNKAL+DTFS+FG ILSC
Sbjct: 105 EELNYSPIKERPCRIMWSQRDPALRKTGAGNIYIKNLDPAIDNKALHDTFSAFGQILSCK 164
Query: 13 VAMD 2
+A D
Sbjct: 165 IATD 168
>sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3
SV=1
Length = 753
Score = 166 bits (420), Expect = 3e-040
Identities = 91/169 (53%), Positives = 113/169 (66%), Gaps = 2/169 (1%)
Frame = -1
Query: 502 SGIAPTTAMVDQVPNQPASTVASPHATQVAAVAAAAAEALQTHPNS-SLYVGDLDQSVNE 326
S A TT + N T +P A A AA A + P+S SLYVG+LD SV E
Sbjct: 2 SAEASTTPAAETPVNGTPETSTTPAAPAAEATAAETAAPSTSQPHSASLYVGELDPSVTE 61
Query: 325 AHLLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPDDAMRAMDILNYTPIRERPIRI 149
A L +LF+ + V ++RVCRD +TRRSLGYAYVN+ N D RA++ LNYT I+ +P RI
Sbjct: 62 AMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRI 121
Query: 148 MRSNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTILSCNVAMD 2
M S RDP+ R +G+GNVFIKNLD IDNKAL+DTF++FG ILSC VA D
Sbjct: 122 MWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD 170
>sp|P21187|PABP_DROME Polyadenylate-binding protein OS=Drosophila melanogaster
GN=pAbp PE=1 SV=3
Length = 634
Score = 164 bits (414), Expect = 1e-039
Identities = 82/123 (66%), Positives = 95/123 (77%), Gaps = 1/123 (0%)
Frame = -1
Query: 367 SSLYVGDLDQSVNEAHLLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPDDAMRAMD 191
+SLYVGDL Q VNE+ L D F+ PV ++RVCRD +TRRSLGYAYVNF P DA RA+D
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 190 ILNYTPIRERPIRIMRSNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTILSCNV 11
+N+ +R +PIRIM S RDPS R SG GNVFIKNLD IDNKA+YDTFS+FG ILSC V
Sbjct: 62 TMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKV 121
Query: 10 AMD 2
A D
Sbjct: 122 ATD 124
>sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pab1 PE=3
SV=1
Length = 731
Score = 163 bits (412), Expect = 2e-039
Identities = 88/155 (56%), Positives = 110/155 (70%), Gaps = 4/155 (2%)
Frame = -1
Query: 454 PASTVASPHAT--QVAAVAAAAAEALQTHPNS-SLYVGDLDQSVNEAHLLDLFNQVAPVQ 284
PA A+P AT +V AV + P+S SLYVG+LD SV EA L +LF+ + V
Sbjct: 22 PAPAAAAPSATTPEVTAVENSTPAPAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVA 81
Query: 283 TVRVCRD-LTRRSLGYAYVNFANPDDAMRAMDILNYTPIRERPIRIMRSNRDPSTRLSGK 107
++RVCRD +TRRSLGYAYVN+ N D RA++ LNYT I+ +P RIM S RDP+ R +G+
Sbjct: 82 SIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQ 141
Query: 106 GNVFIKNLDGTIDNKALYDTFSSFGTILSCNVAMD 2
GNVFIKNLD IDNKAL+DTF++FG ILSC VA D
Sbjct: 142 GNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD 176
>sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus oryzae GN=pab1 PE=3 SV=1
Length = 765
Score = 163 bits (412), Expect = 2e-039
Identities = 91/170 (53%), Positives = 115/170 (67%), Gaps = 3/170 (1%)
Frame = -1
Query: 502 SGIAPTTAMVD-QVPNQP-ASTVASPHATQVAAVAAAAAEALQTHPNSSLYVGDLDQSVN 329
S A TT D V + P ST + A +V AV + A ++SLYVG+LD SV
Sbjct: 2 SADASTTPAADSNVTSTPETSTTPAAPAPEVTAVESTTAPNASQPHSASLYVGELDPSVT 61
Query: 328 EAHLLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPDDAMRAMDILNYTPIRERPIR 152
EA L +LF+ + V ++RVCRD +TRRSLGYAYVN+ N D RA++ LNYT I+ +P R
Sbjct: 62 EAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCR 121
Query: 151 IMRSNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTILSCNVAMD 2
IM S RDP+ R +G+GNVFIKNLD IDNKAL+DTF++FG ILSC VA D
Sbjct: 122 IMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD 171
>sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1
Length = 753
Score = 163 bits (410), Expect = 4e-039
Identities = 91/175 (52%), Positives = 122/175 (69%), Gaps = 7/175 (4%)
Frame = -1
Query: 508 VASGIAPTTAMVDQVPNQP-ASTVASPHATQVAAVAAAA----AEALQTHPNSSLYVGDL 344
+++ ++ T A + V P A+ A+ A +V AV +A+ A Q H ++SLYVG+L
Sbjct: 1 MSAEVSTTPAADNTVNGTPEATNAAATSAPEVTAVESASPSTTPSASQPH-SASLYVGEL 59
Query: 343 DQSVNEAHLLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPDDAMRAMDILNYTPIR 167
D SV EA L +LF+ + V ++RVCRD +TRRSLGYAYVN+ N D RA++ LNYT I+
Sbjct: 60 DPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIK 119
Query: 166 ERPIRIMRSNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTILSCNVAMD 2
+P RIM S RDP+ R +G+GNVFIKNLD IDNKAL+DTF++FG ILSC VA D
Sbjct: 120 GKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD 174
>sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenopus laevis
GN=pabpc1-a PE=1 SV=3
Length = 633
Score = 162 bits (409), Expect = 5e-039
Identities = 80/127 (62%), Positives = 97/127 (76%), Gaps = 1/127 (0%)
Frame = -1
Query: 379 THPNSSLYVGDLDQSVNEAHLLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPDDAM 203
++P +SLYVGDL Q V EA L + F+ P+ ++RVCRD +TRRSLGYAYVNF P DA
Sbjct: 7 SYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAE 66
Query: 202 RAMDILNYTPIRERPIRIMRSNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTIL 23
RA+D +N+ I+ RP+RIM S RDPS R SG GN+FIKNLD +IDNKALYDTFS+FG IL
Sbjct: 67 RALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 22 SCNVAMD 2
SC V D
Sbjct: 127 SCKVVCD 133
>sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus clavatus GN=pab1 PE=3 SV=1
Length = 754
Score = 162 bits (409), Expect = 5e-039
Identities = 90/167 (53%), Positives = 117/167 (70%), Gaps = 5/167 (2%)
Frame = -1
Query: 487 TTAMVDQVPNQP-ASTVASPHATQVAAVAAAAAEALQTH--PNS-SLYVGDLDQSVNEAH 320
TT D V P A+ A+ A +V AV +++ + + P+S SLYVG+LD SV EA
Sbjct: 7 TTPAADNVNGTPEATNAAATSAPEVTAVESSSPTSPNNNNQPHSASLYVGELDPSVTEAM 66
Query: 319 LLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPDDAMRAMDILNYTPIRERPIRIMR 143
L +LF+ + V ++RVCRD +TRRSLGYAYVN+ N D RA++ LNYT I+ +P RIM
Sbjct: 67 LYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMW 126
Query: 142 SNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTILSCNVAMD 2
S RDP+ R +G+GNVFIKNLD IDNKAL+DTF++FG ILSC VA D
Sbjct: 127 SQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD 173
>sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Ustilago maydis GN=PAB1 PE=3 SV=1
Length = 651
Score = 162 bits (409), Expect = 5e-039
Identities = 90/168 (53%), Positives = 111/168 (66%), Gaps = 2/168 (1%)
Frame = -1
Query: 508 VASGIAPTTAMVDQVPNQPASTVASPHATQVAAVAAAAAEALQTHPNSSLYVGDLDQSVN 329
++S +P A PAST A P A Q A N+SLYVG+LD SV
Sbjct: 1 MSSTESPVPAAAAPAEAVPASTPA-PAAEQPAVGNGEQRNNADAANNTSLYVGELDPSVT 59
Query: 328 EAHLLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPDDAMRAMDILNYTPIRERPIR 152
EA L ++F+ + V ++RVCRD +TRRSLGYAYVNF N D RAM+ LNY+ IR RP R
Sbjct: 60 EAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQLNYSLIRNRPCR 119
Query: 151 IMRSNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTILSCNVA 8
IM S RDP+ R +G+GN+FIKNLD IDNKAL+DTF++FG ILSC VA
Sbjct: 120 IMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVA 167
>sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4
PE=1 SV=1
Length = 644
Score = 161 bits (407), Expect = 8e-039
Identities = 82/130 (63%), Positives = 97/130 (74%), Gaps = 1/130 (0%)
Frame = -1
Query: 388 ALQTHPNSSLYVGDLDQSVNEAHLLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPD 212
A ++P +SLYVGDL V EA L + F+ PV ++RVCRD +TRRSLGYAYVNF P
Sbjct: 4 AASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA 63
Query: 211 DAMRAMDILNYTPIRERPIRIMRSNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFG 32
DA RA+D +N+ I+ +PIRIM S RDPS R SG GNVFIKNLD +IDNKALYDTFS+FG
Sbjct: 64 DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 31 TILSCNVAMD 2
ILSC V D
Sbjct: 124 NILSCKVVCD 133
>sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Coccidioides immitis GN=PAB1 PE=3 SV=1
Length = 768
Score = 161 bits (406), Expect = 1e-038
Identities = 88/167 (52%), Positives = 112/167 (67%), Gaps = 6/167 (3%)
Frame = -1
Query: 499 GIAPTTAMVDQVPNQPASTVASPHATQVAAVAAAAAEALQTHPNSSLYVGDLDQSVNEAH 320
G AP +A N A T A + + ++ Q H ++SLYVG+LD SV EA
Sbjct: 16 GAAPESATNGSNANVAADTTAG----EASQTTSSTTPTAQPH-SASLYVGELDPSVTEAM 70
Query: 319 LLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPDDAMRAMDILNYTPIRERPIRIMR 143
L +LF+ + V ++RVCRD +TRRSLGYAYVN+ N D RA++ LNYT I+ RP RIM
Sbjct: 71 LFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMW 130
Query: 142 SNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTILSCNVAMD 2
S RDP+ R +G+GNVFIKNLD IDNKAL+DTF++FG ILSC VA D
Sbjct: 131 SQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD 177
>sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein OS=Xenopus
tropicalis GN=epabp PE=2 SV=1
Length = 629
Score = 159 bits (400), Expect = 5e-038
Identities = 79/126 (62%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Frame = -1
Query: 376 HPNSSLYVGDLDQSVNEAHLLDLFNQVAPVQTVRVCRDL-TRRSLGYAYVNFANPDDAMR 200
+P +SLYVGDL V EA L + F+ P+ ++RVCRD+ TRRSLGYAY+NF P DA R
Sbjct: 8 YPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAER 67
Query: 199 AMDILNYTPIRERPIRIMRSNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTILS 20
A+D +N+ I+ RPIRIM S RDP R SG GNVFIKNLD +IDNKALYDTFS+FG ILS
Sbjct: 68 ALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILS 127
Query: 19 CNVAMD 2
C V D
Sbjct: 128 CKVVCD 133
>sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1
PE=2 SV=1
Length = 636
Score = 159 bits (400), Expect = 5e-038
Identities = 78/127 (61%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
Frame = -1
Query: 379 THPNSSLYVGDLDQSVNEAHLLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPDDAM 203
++P +SLYVGDL V EA L + F+ P+ ++RVCRD +TRRSLGYAYVNF P DA
Sbjct: 7 SYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAE 66
Query: 202 RAMDILNYTPIRERPIRIMRSNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTIL 23
RA+D +N+ I+ +P+RIM S RDPS R SG GN+FIKNLD +IDNKALYDTFS+FG IL
Sbjct: 67 RALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 22 SCNVAMD 2
SC V D
Sbjct: 127 SCKVVCD 133
>sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1
PE=1 SV=2
Length = 636
Score = 159 bits (400), Expect = 5e-038
Identities = 78/127 (61%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
Frame = -1
Query: 379 THPNSSLYVGDLDQSVNEAHLLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPDDAM 203
++P +SLYVGDL V EA L + F+ P+ ++RVCRD +TRRSLGYAYVNF P DA
Sbjct: 7 SYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAE 66
Query: 202 RAMDILNYTPIRERPIRIMRSNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTIL 23
RA+D +N+ I+ +P+RIM S RDPS R SG GN+FIKNLD +IDNKALYDTFS+FG IL
Sbjct: 67 RALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 22 SCNVAMD 2
SC V D
Sbjct: 127 SCKVVCD 133
>sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1
PE=1 SV=1
Length = 636
Score = 159 bits (400), Expect = 5e-038
Identities = 78/127 (61%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
Frame = -1
Query: 379 THPNSSLYVGDLDQSVNEAHLLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPDDAM 203
++P +SLYVGDL V EA L + F+ P+ ++RVCRD +TRRSLGYAYVNF P DA
Sbjct: 7 SYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAE 66
Query: 202 RAMDILNYTPIRERPIRIMRSNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTIL 23
RA+D +N+ I+ +P+RIM S RDPS R SG GN+FIKNLD +IDNKALYDTFS+FG IL
Sbjct: 67 RALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 22 SCNVAMD 2
SC V D
Sbjct: 127 SCKVVCD 133
>sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus norvegicus
GN=Pabpc1 PE=2 SV=1
Length = 636
Score = 159 bits (400), Expect = 5e-038
Identities = 78/127 (61%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
Frame = -1
Query: 379 THPNSSLYVGDLDQSVNEAHLLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPDDAM 203
++P +SLYVGDL V EA L + F+ P+ ++RVCRD +TRRSLGYAYVNF P DA
Sbjct: 7 SYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAE 66
Query: 202 RAMDILNYTPIRERPIRIMRSNRDPSTRLSGKGNVFIKNLDGTIDNKALYDTFSSFGTIL 23
RA+D +N+ I+ +P+RIM S RDPS R SG GN+FIKNLD +IDNKALYDTFS+FG IL
Sbjct: 67 RALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNIL 126
Query: 22 SCNVAMD 2
SC V D
Sbjct: 127 SCKVVCD 133
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,323,427,680
Number of Sequences: 518415
Number of Extensions: 116323427680
Number of Successful Extensions: 743337835
Number of sequences better than 0.0: 0
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