Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN28870


BLASTX 7.6.2

Query= UN28870 /QuerySize=454
        (453 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297849966|ref|XP_002892864.1| hypothetical protein ARALYDRAFT...    114   4e-024
gi|30684344|ref|NP_849669.1| uncharacterized protein [Arabidopsi...    106   8e-022
gi|87162609|gb|ABD28404.1| hypothetical protein MtrDRAFT_AC14834...     62   2e-008
gi|317106740|dbj|BAJ53236.1| JHL06P13.17 [Jatropha curcas]              58   2e-007

>gi|297849966|ref|XP_002892864.1| hypothetical protein ARALYDRAFT_888930
        [Arabidopsis lyrata subsp. lyrata]

          Length = 76

 Score =  114 bits (284), Expect = 4e-024
 Identities = 64/76 (84%), Positives = 65/76 (85%), Gaps = 5/76 (6%)
 Frame = +3

Query:  63 MNNNNNNLK----MSSAQESGNRTTNIVITETRNNKKVERKASMDVDKCAEAFITNFRKQ 230
           MNNNNNN K    MSSA+ES N TTNI ITETR NKKVERKASMDVDKCAEAFIT FR Q
Sbjct:   1 MNNNNNNNKNTKMMSSAKESRNGTTNIFITETR-NKKVERKASMDVDKCAEAFITKFRNQ 59

Query: 231 LLLQRLESIENMLSRG 278
           LLLQRLESIENMLSRG
Sbjct:  60 LLLQRLESIENMLSRG 75

>gi|30684344|ref|NP_849669.1| uncharacterized protein [Arabidopsis thaliana]

          Length = 73

 Score =  106 bits (264), Expect = 8e-022
 Identities = 58/73 (79%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
 Frame = +3

Query:  60 MMNNNNNNLKMSSAQESGNRTTNIVITETRNNKKVERKASMDVDKCAEAFITNFRKQLLL 239
           M NN N  + MSSA+ESGN TTNIVI ET  NKKVERKASMDVDK AEAFIT FR QLLL
Sbjct:   1 MNNNKNMKMMMSSAKESGNGTTNIVIKETM-NKKVERKASMDVDKSAEAFITKFRNQLLL 59

Query: 240 QRLESIENMLSRG 278
           QRLESIENMLS+G
Sbjct:  60 QRLESIENMLSKG 72

>gi|87162609|gb|ABD28404.1| hypothetical protein MtrDRAFT_AC148340g20v2
        [Medicago truncatula]

          Length = 96

 Score =  62 bits (148), Expect = 2e-008
 Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
 Frame = +3

Query:   9 IHPKSNTRKRKHSYISTMMNNNNNNLKMSSAQESGNRTTNIVITETRNNKKVERKASMDV 188
           I P S+ +K +    + M     N+   S++    +     V      NKK+ERK + D+
Sbjct:   6 IQPSSDLKKIEEKVTTNMREKMRNS---STSLSYDHNEVKKVEDSFETNKKLERKTTEDI 62

Query: 189 DKCAEAFITNFRKQLLLQRLESIEN---MLSRGL 281
           +  A+AFI NFRKQL++QRL+SIEN   ML+RGL
Sbjct:  63 NASADAFIKNFRKQLVIQRLQSIENYEKMLARGL 96

>gi|317106740|dbj|BAJ53236.1| JHL06P13.17 [Jatropha curcas]

          Length = 90

 Score =  58 bits (139), Expect = 2e-007
 Identities = 33/54 (61%), Positives = 42/54 (77%), Gaps = 4/54 (7%)
 Frame = +3

Query: 132 VITETRN-NKKVERKASMDVDKCAEAFITNFRKQLLLQRLESIEN---MLSRGL 281
           V+TE +   +K+E K SMD+++ AEAFI NFR QLL+QRLESIEN   ML+RGL
Sbjct:  37 VVTENKPVAQKLESKPSMDINESAEAFIKNFRHQLLIQRLESIENYEQMLARGL 90

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,432,271,374,555
Number of Sequences: 15229318
Number of Extensions: 3432271374555
Number of Successful Extensions: 818036173
Number of sequences better than 0.0: 0