BLASTX 7.6.2
Query= UN33350 /QuerySize=1395
(1394 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G40470.1 | Symbols: | FUNCTIONS IN: molecular... 455 5e-128
TAIR9_protein||AT5G27920.1 | Symbols: | F-box family protein | ... 63 4e-010
TAIR9_protein||AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | SKP2B; u... 62 6e-010
TAIR9_protein||AT1G21410.1 | Symbols: SKP2A | SKP2A | chr1:74974... 60 4e-009
TAIR9_protein||AT1G80630.1 | Symbols: | leucine-rich repeat fam... 57 2e-008
TAIR9_protein||AT5G23340.1 | Symbols: | INVOLVED IN: biological... 57 3e-008
TAIR9_protein||AT2G25490.1 | Symbols: EBF1, FBL6 | EBF1 (EIN3-BI... 53 4e-007
TAIR9_protein||AT1G80570.2 | Symbols: | F-box family protein (F... 49 5e-006
TAIR9_protein||AT1G80570.3 | Symbols: | F-box family protein (F... 49 5e-006
TAIR9_protein||AT1G80570.1 | Symbols: | F-box family protein (F... 49 5e-006
>TAIR9_protein||AT5G40470.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is: F-box family
protein (FBL4) (TAIR:AT4G15475.1); Has 1784 Blast hits to 1176 proteins
in 130 species: Archae - 0; Bacteria - 16; Metazoa - 963; Fungi - 149;
Plants - 477; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink).
| chr5:16208255-16209745 REVERSE
Length = 497
Score = 455 bits (1168), Expect = 5e-128
Identities = 250/380 (65%), Positives = 292/380 (76%), Gaps = 11/380 (2%)
Frame = -1
Query: 1361 HLDRLFFLLQPPKALFLGQSTFSVFLASSLYFLVSHFSLSQVAGTRFVPLGCFVSFSQGL 1182
+L L FL+ P S+ V L++SL L + + F + F S + L
Sbjct: 123 NLRNLCFLINPV------SSSSLVPLSTSLSLTSLSIELWKPQNSGFTWIALFSSLKE-L 175
Query: 1181 ISRVSSRNSSA--SLTGSNPNPDVVELGLESVSLTGIQSDDTGVSWLWKRCRKLKKLSLK 1008
V S +S A S PNP+VVELGLESVSL GIQ DD V+WLWK CRKLKKLSL+
Sbjct: 176 SIHVCSTSSPAFDFYPKSKPNPEVVELGLESVSLFGIQPDDNDVTWLWKSCRKLKKLSLR 235
Query: 1007 SCGTVGETEFFGLCLKNLEEIELKTCRSIADVVLLKVSEICESLNSLLIYDGGNKDGLVH 828
SCG++GE GLCLKNLEEIEL+TCRSI DVVLLKVSEICESL SLLI+DGG+KDGLV
Sbjct: 236 SCGSIGEE--IGLCLKNLEEIELRTCRSIVDVVLLKVSEICESLKSLLIHDGGSKDGLVQ 293
Query: 827 FMNNARCNDTLKTLDLRLPMDLMDEHLVSLAANFKYLSTLRLTSCYLVTGHGLKVLALSF 648
FM+NARC DTL+ LDLRLPMDL D+HLVSLAANFK LSTLRLTSC VTG LK LALSF
Sbjct: 294 FMSNARCYDTLERLDLRLPMDLTDDHLVSLAANFKCLSTLRLTSCIFVTGFSLKALALSF 353
Query: 647 SSSLEELSLRSCDAVERETGLLATLGQHLGKLWKLELSFNEWLYDKEVVSMLASCGGLVE 468
SSSLEELSL SC+A+ERE GLLAT+GQHLG+L KL+L+ NEWL+DKEVVSMLASC GLVE
Sbjct: 354 SSSLEELSLLSCNAIERERGLLATIGQHLGRLRKLDLTRNEWLFDKEVVSMLASCNGLVE 413
Query: 467 LDLRGCKNLTGSVLVSLNRNCVKLRSLDIASCRLIQADEVEVFVMKSQRLKKIVVEENKI 288
+ LR CK+LTG+VLV+LN+NCVKL++LDI CRLI+ D+VE FVMK+Q LKK+VVEEN+I
Sbjct: 414 VVLRDCKHLTGAVLVALNKNCVKLKTLDILGCRLIEPDDVEGFVMKTQCLKKLVVEENQI 473
Query: 287 TEATMKWASSKLIDVVALDS 228
TEA +K ASSK I+ V DS
Sbjct: 474 TEAILKLASSKFIETVVFDS 493
Score = 91 bits (225), Expect = 1e-018
Identities = 47/73 (64%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Frame = -2
Query: 1387 AESSFNDHLISIVSSSCSNLRKLCFLVNPLSPSSLLPLSTSLSLTSLSLKLLGPVS--FH 1214
AE+ F+D LISI+SS C NLR LCFL+NP+S SSL+PLSTSLSLTSLS++L P + F
Sbjct: 105 AETIFSDELISIISSCCFNLRNLCFLINPVSSSSLVPLSTSLSLTSLSIELWKPQNSGFT 164
Query: 1213 WVASFPSLKDLSV 1175
W+A F SLK+LS+
Sbjct: 165 WIALFSSLKELSI 177
>TAIR9_protein||AT5G27920.1 | Symbols: | F-box family protein |
chr5:9942063-9944507 REVERSE
Length = 643
Score = 63 bits (152), Expect = 4e-010
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Frame = -1
Query: 965 LKNLEEIELKTCRSIADVVLLKVSEICESLNSLLIYDGGNKDGLVHFMNNARCNDTLKTL 786
LK+L+ I + ++D L+ +S C SL + + + + ++ AR LKTL
Sbjct: 299 LKHLKTIWIDGAH-VSDSSLVSLSSSCRSLMEIGLSRCVDVTD-IGMISLARNCLNLKTL 356
Query: 785 DLRLPMDLMDEHLVSLAANFKYLSTLRLTSCYLVTGHGLKVLALSFSSSLEELSLRSCDA 606
+L + D + ++A + + L TL+L SC+L+T GL+ L +S ++EL L C
Sbjct: 357 NLACCGFVTDVAISAVAQSCRNLGTLKLESCHLITEKGLQSLG-CYSMLVQELDLTDCYG 415
Query: 605 VERETGLLATLGQHLGK---LWKLELSFNEWLYDKEVVSMLASCGGLVELDLRGCKNLTG 435
V + GL +++ K L +L+L + DK + + + C L+ELDL C
Sbjct: 416 V-NDRGL-----EYISKCSNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRCAGFGD 469
Query: 434 SVLVSLNRNCVKLRSLDIASC 372
L +L+R C L L ++ C
Sbjct: 470 DGLAALSRGCKSLNRLILSYC 490
>TAIR9_protein||AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | SKP2B;
ubiquitin-protein ligase | chr1:28940888-28942401 FORWARD
Length = 361
Score = 62 bits (150), Expect = 6e-010
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 6/162 (3%)
Frame = -1
Query: 845 KDGLVHFMNNARCNDTLKTLDLRLPMDLMDEHLVSLAANFKYLSTLRLTSCYLVTGHGLK 666
+D V + N C++ L+ LDL + D L SLA L+ L L+ C + L
Sbjct: 105 EDNAVEAIAN-HCHE-LQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALA 162
Query: 665 VLALSFSSSLEELSLRSC-DAVERETGLLATLGQHLGKLWKLELSFNEWLYDKEVVSMLA 489
L F L+ L+L C +AV T L +G++ +L L L + E + D V+S+
Sbjct: 163 HLT-RFCRKLKILNLCGCVEAVSDNT--LQAIGENCNQLQSLNLGWCENISDDGVMSLAY 219
Query: 488 SCGGLVELDLRGCKNLTGSVLVSLNRNCVKLRSLDIASCRLI 363
C L LDL C +T +V+L C+ LRSL + CR I
Sbjct: 220 GCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNI 261
>TAIR9_protein||AT1G21410.1 | Symbols: SKP2A | SKP2A | chr1:7497479-7499386
FORWARD
Length = 361
Score = 60 bits (143), Expect = 4e-009
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 4/161 (2%)
Frame = -1
Query: 845 KDGLVHFMNNARCNDTLKTLDLRLPMDLMDEHLVSLAANFKYLSTLRLTSCYLVTGHGLK 666
+D V + N C++ L+ LDL + + D L +LA L+ L L+ C + +
Sbjct: 105 EDNAVEAIAN-HCHE-LQELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIA 162
Query: 665 VLALSFSSSLEELSLRSCDAVERETGLLATLGQHLGKLWKLELSFNEWLYDKEVVSMLAS 486
L F L+ L+L C + L A +G + ++ L L + E + D V+S+
Sbjct: 163 YLT-RFCRKLKVLNLCGCVKAVTDNALEA-IGNNCNQMQSLNLGWCENISDDGVMSLAYG 220
Query: 485 CGGLVELDLRGCKNLTGSVLVSLNRNCVKLRSLDIASCRLI 363
C L LDL GC +T +V+L CV LRSL + CR I
Sbjct: 221 CPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNI 261
>TAIR9_protein||AT1G80630.1 | Symbols: | leucine-rich repeat family protein |
chr1:30308879-30310615 REVERSE
Length = 579
Score = 57 bits (137), Expect = 2e-008
Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 28/291 (9%)
Frame = -1
Query: 1058 VSWLWKRCRKLKKLSLKSCG------TVGETEFFGLCLKNLEEIELKTCRSIADVVLLKV 897
+ ++ + R L+ L++ G + + F CL L+ + ++D +L +
Sbjct: 207 IKFVLRNSRNLESLAINGIGLRPRESLLTDAFLFARCLTELDLSD----SFLSDDLLCLI 262
Query: 896 SEICESLNSLLIYD--GGNKDGLVHFMNNARCNDTLKTLDLRLPMDLMDEHLVSLAANFK 723
+ L LL+ D G DG+++ ++ + +L L+L+ L DE ++ L F+
Sbjct: 263 ASAKLPLKKLLLSDCHGFTFDGILYLLDKYQ---SLVHLNLKGANFLSDEMVMKLGMFFR 319
Query: 722 YLSTLRLTSCYLVTGHGLKVLALSFSSSLEE-LSLRSCDAVERETGL---LATLGQHLGK 555
L+ L L+ C +TG L+F S +E +SLR V G+
Sbjct: 320 RLTFLNLSFCSKLTG-------LAFFSIIERCVSLRCMIMVGTNFGVEEYTKDTKDFKSG 372
Query: 554 LWKLELSFNEWLYDKEVVSMLASCGGLVELDLRGCKNLTGSVLVSLNRNCVKLRSLDIAS 375
+ L LS N L D+ + + C + LD+ C +T ++ + RNC KLRSLDI+
Sbjct: 373 VKFLYLSRNHNLLDECLEKISRHCPFIESLDVAQCPGITRDGILEVWRNCGKLRSLDISR 432
Query: 374 CRLIQADEVEVFVMKSQRLKKIVVEENKITEATMKWASSKLIDVVALDSDG 222
C I++ V F + +L+ + I + + S K ++ LD G
Sbjct: 433 CTGIKSLGVVDFEL--PKLESLRACGTWIDDEALDMISKKCRGLLHLDLQG 481
>TAIR9_protein||AT5G23340.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype
(InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: F-box
family protein (FBL4) (TAIR:AT4G15475.1); Has 9095 Blast hits to 3545
proteins in 210 species: Archae - 0; Bacteria - 454; Metazoa - 4575;
Fungi - 774; Plants - 2118; Viruses - 15; Other Eukaryotes - 1159
(source: NCBI BLink). | chr5:7856314-7857983 FORWARD
Length = 406
Score = 57 bits (136), Expect = 3e-008
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Frame = -1
Query: 758 DEHLVSLAANFKYLSTLRLTSCYLVTGHGLKVLALSFSSSLEELSLRSCDAVERETGLLA 579
D L ++ FK+L L L +C +T GL + S L+ L + C + + L+
Sbjct: 87 DSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGRCL-SLLQFLDVSYCRKLSDKG--LS 143
Query: 578 TLGQHLGKLWKLELSFNEWLYDKEVVSMLASCGGLVELDLRGCKNLTGSVLVSLNRNCVK 399
+ + L L L+ ++ D+ + S+ C L L L+GC N+T S L L + C K
Sbjct: 144 AVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEALGLQGCTNITDSGLADLVKGCRK 203
Query: 398 LRSLDIASC 372
++SLDI C
Sbjct: 204 IKSLDINKC 212
>TAIR9_protein||AT2G25490.1 | Symbols: EBF1, FBL6 | EBF1 (EIN3-BINDING F BOX
PROTEIN 1); protein binding / ubiquitin-protein ligase |
chr2:10848018-10850275 REVERSE
Length = 629
Score = 53 bits (126), Expect = 4e-007
Identities = 40/148 (27%), Positives = 78/148 (52%), Gaps = 4/148 (2%)
Frame = -1
Query: 713 TLRLTSCYLVTGHGLKVLALSFSSSLEELSLRSCDAVERETGLLATLGQHLGKLWKLELS 534
++R ++ V+ GL+ + S SL LSL + + + GLL + + +L KLEL+
Sbjct: 155 SIRGSNSAKVSDLGLRSIGRS-CPSLGSLSLWNVSTI-TDNGLL-EIAEGCAQLEKLELN 211
Query: 533 FNEWLYDKEVVSMLASCGGLVELDLRGCKNLTGSVLVSLNRNCVKLRSLDIASCRLIQAD 354
+ DK +V++ SC L EL L C + L+++ R+C KL+S+ I +C L++
Sbjct: 212 RCSTITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQ 271
Query: 353 EVEVFVMKSQ-RLKKIVVEENKITEATM 273
+ + + L K+ ++ +T+ ++
Sbjct: 272 GIASLLSNTTCSLAKLKLQMLNVTDVSL 299
>TAIR9_protein||AT1G80570.2 | Symbols: | F-box family protein (FBL14) |
chr1:30290661-30292231 FORWARD
Length = 481
Score = 49 bits (116), Expect = 5e-006
Identities = 70/256 (27%), Positives = 105/256 (41%), Gaps = 34/256 (13%)
Frame = -1
Query: 1004 CGTVGETE-FFGLCLK--NLEEIEL-------KTCRSIADVVLLKVSEICESLNSL-LIY 858
CG V ++ LC + NL ++E+ K + + D LL ++ C SL L L +
Sbjct: 60 CGLVPASDALLSLCRRFPNLSKVEIIYSGWMSKLGKQVDDQGLLVLTTNCHSLTDLTLSF 119
Query: 857 DGGNKD-GLVHFMNNARCNDTLKTLDLRLPMDLMDEHLVSLAANFKYLSTLRLTSCYLVT 681
D G+ H + C + L +L L + ++SLA K L L L C V
Sbjct: 120 CTFITDVGIGHL---SSCPE-LSSLKLNFAPRITGCGVLSLAVGCKKLRRLHLIRCLNVA 175
Query: 680 GHGLKVLALSF---SSSLEELSLRSCDAVERETGLLATLGQHLGKLWKLELSFNE----- 525
V L + +LEEL +++C A+ G L L KL L+ +
Sbjct: 176 ----SVEWLEYFGKLETLEELCIKNCRAIGE--GDLIKLRNSWRKLTSLQFEVDANYRYM 229
Query: 524 WLYDKEVV----SMLASCGGLVELDLRGCKNLTGSVLVSLNRNCVKLRSLDIASCRLIQA 357
+YD+ V L C LVEL L C G L + RNC L L + C +
Sbjct: 230 KVYDQLDVERWPKQLVPCDSLVELSLGNCIIAPGRGLACVLRNCKNLEKLHLDMCTGVSD 289
Query: 356 DEVEVFVMKSQRLKKI 309
++ V K+ L+ I
Sbjct: 290 SDIIALVQKASHLRSI 305
>TAIR9_protein||AT1G80570.3 | Symbols: | F-box family protein (FBL14) |
chr1:30290828-30292231 FORWARD
Length = 468
Score = 49 bits (116), Expect = 5e-006
Identities = 70/256 (27%), Positives = 105/256 (41%), Gaps = 34/256 (13%)
Frame = -1
Query: 1004 CGTVGETE-FFGLCLK--NLEEIEL-------KTCRSIADVVLLKVSEICESLNSL-LIY 858
CG V ++ LC + NL ++E+ K + + D LL ++ C SL L L +
Sbjct: 47 CGLVPASDALLSLCRRFPNLSKVEIIYSGWMSKLGKQVDDQGLLVLTTNCHSLTDLTLSF 106
Query: 857 DGGNKD-GLVHFMNNARCNDTLKTLDLRLPMDLMDEHLVSLAANFKYLSTLRLTSCYLVT 681
D G+ H + C + L +L L + ++SLA K L L L C V
Sbjct: 107 CTFITDVGIGHL---SSCPE-LSSLKLNFAPRITGCGVLSLAVGCKKLRRLHLIRCLNVA 162
Query: 680 GHGLKVLALSF---SSSLEELSLRSCDAVERETGLLATLGQHLGKLWKLELSFNE----- 525
V L + +LEEL +++C A+ G L L KL L+ +
Sbjct: 163 ----SVEWLEYFGKLETLEELCIKNCRAIGE--GDLIKLRNSWRKLTSLQFEVDANYRYM 216
Query: 524 WLYDKEVV----SMLASCGGLVELDLRGCKNLTGSVLVSLNRNCVKLRSLDIASCRLIQA 357
+YD+ V L C LVEL L C G L + RNC L L + C +
Sbjct: 217 KVYDQLDVERWPKQLVPCDSLVELSLGNCIIAPGRGLACVLRNCKNLEKLHLDMCTGVSD 276
Query: 356 DEVEVFVMKSQRLKKI 309
++ V K+ L+ I
Sbjct: 277 SDIIALVQKASHLRSI 292
>TAIR9_protein||AT1G80570.1 | Symbols: | F-box family protein (FBL14) |
chr1:30290828-30292231 FORWARD
Length = 468
Score = 49 bits (116), Expect = 5e-006
Identities = 70/256 (27%), Positives = 105/256 (41%), Gaps = 34/256 (13%)
Frame = -1
Query: 1004 CGTVGETE-FFGLCLK--NLEEIEL-------KTCRSIADVVLLKVSEICESLNSL-LIY 858
CG V ++ LC + NL ++E+ K + + D LL ++ C SL L L +
Sbjct: 47 CGLVPASDALLSLCRRFPNLSKVEIIYSGWMSKLGKQVDDQGLLVLTTNCHSLTDLTLSF 106
Query: 857 DGGNKD-GLVHFMNNARCNDTLKTLDLRLPMDLMDEHLVSLAANFKYLSTLRLTSCYLVT 681
D G+ H + C + L +L L + ++SLA K L L L C V
Sbjct: 107 CTFITDVGIGHL---SSCPE-LSSLKLNFAPRITGCGVLSLAVGCKKLRRLHLIRCLNVA 162
Query: 680 GHGLKVLALSF---SSSLEELSLRSCDAVERETGLLATLGQHLGKLWKLELSFNE----- 525
V L + +LEEL +++C A+ G L L KL L+ +
Sbjct: 163 ----SVEWLEYFGKLETLEELCIKNCRAIGE--GDLIKLRNSWRKLTSLQFEVDANYRYM 216
Query: 524 WLYDKEVV----SMLASCGGLVELDLRGCKNLTGSVLVSLNRNCVKLRSLDIASCRLIQA 357
+YD+ V L C LVEL L C G L + RNC L L + C +
Sbjct: 217 KVYDQLDVERWPKQLVPCDSLVELSLGNCIIAPGRGLACVLRNCKNLEKLHLDMCTGVSD 276
Query: 356 DEVEVFVMKSQRLKKI 309
++ V K+ L+ I
Sbjct: 277 SDIIALVQKASHLRSI 292
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,531,581,943
Number of Sequences: 33410
Number of Extensions: 17531581943
Number of Successful Extensions: 567469405
Number of sequences better than 0.0: 0
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