BLASTX 7.6.2

Query= UN37116 /QuerySize=938
        (937 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q7TSU0|C1D_CRIGR Nuclear nucleic acid-binding protein C1D OS=...     69   4e-011
sp|Q5XJ97|C1D_DANRE Nuclear nucleic acid-binding protein C1D OS=...     65   8e-010
sp|O35473|C1D_MOUSE Nuclear nucleic acid-binding protein C1D OS=...     65   8e-010
sp|Q13901|C1D_HUMAN Nuclear nucleic acid-binding protein C1D OS=...     64   1e-009
sp|Q5RBU4|C1D_PONAB Nuclear nucleic acid-binding protein C1D OS=...     64   1e-009
sp|Q32PE4|C1D_BOVIN Nuclear nucleic acid-binding protein C1D OS=...     64   1e-009

>sp|Q7TSU0|C1D_CRIGR Nuclear nucleic acid-binding protein C1D OS=Cricetulus
        griseus GN=C1D PE=2 SV=1

          Length = 141

 Score =  69 bits (167), Expect = 4e-011
 Identities = 42/138 (30%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
 Frame = +3

Query: 105 VAGGIVPKSAMEAVKQTLALLEE----VKPQLEEMLSLAEPEVLAQMQPLKRAKVMYMLA 272
           +AGG + +     + ++L+ LE     V   L+ M+S++  E+L ++ PL++AKV  + A
Sbjct:   1 MAGGEMNEDYPVEIHESLSALESSLGAVDDMLKTMMSVSRNELLQKLDPLEQAKVDLVSA 60

Query: 273 EATTTIFNLRLRCTGVNPDDHRVKSEIERLDVYKEKLQRCMDRSKEPLRPTTVLNRQAAT 452
               ++F + L   GVNP +H VK E+ER+ VY  +++   D+ K        L+R AA+
Sbjct:  61 YTLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKK-----AAKLDRGAAS 115

Query: 453 RFIEHSLPDLSSAQMQNI 506
           RF++++L +       N+
Sbjct: 116 RFVKNALWEPKQKNTPNV 133

>sp|Q5XJ97|C1D_DANRE Nuclear nucleic acid-binding protein C1D OS=Danio rerio
        GN=c1d PE=2 SV=1

          Length = 148

 Score =  65 bits (156), Expect = 8e-010
 Identities = 34/105 (32%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
 Frame = +3

Query: 165 LEEVKPQLEEMLSLAEPEVLAQMQPLKRAKVMYMLAEATTTIFNLRLRCTGVNPDDHRVK 344
           L  V+  ++ ++S++  + L ++ PL++AK+  M A A  ++F + L   GVNP DH +K
Sbjct:  25 LSSVQNMVQTLVSVSRSDRLLKLDPLEQAKLDLMSAYALNSMFWMYLVTQGVNPKDHPIK 84

Query: 345 SEIERLDVYKEKLQRCMDRSKEPLRPTTVLNRQAATRFIEHSLPD 479
            E+ER+  Y  K++   DR     R    ++++AA+RF+ ++L D
Sbjct:  85 QELERIRTYMNKVKEITDR-----RKAAHIDKEAASRFVRNALWD 124

>sp|O35473|C1D_MOUSE Nuclear nucleic acid-binding protein C1D OS=Mus musculus
        GN=C1d PE=1 SV=1

          Length = 141

 Score =  65 bits (156), Expect = 8e-010
 Identities = 37/117 (31%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
 Frame = +3

Query: 123 PKSAMEAVKQTLALLEEVKPQLEEMLSLAEPEVLAQMQPLKRAKVMYMLAEATTTIFNLR 302
           P    E++    + L  V   L+ M++++  E+L ++ PL++AKV  + A    ++F + 
Sbjct:  11 PVEIHESLTALESSLGAVDDMLKTMMAVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVY 70

Query: 303 LRCTGVNPDDHRVKSEIERLDVYKEKLQRCMDRSKEPLRPTTVLNRQAATRFIEHSL 473
           L   GVNP +H VK E+ER+ VY  +++   D+ K        L+R AA+RF++++L
Sbjct:  71 LATQGVNPKEHPVKQELERIRVYMNRVKEITDKKK-----AAKLDRGAASRFVKNAL 122

>sp|Q13901|C1D_HUMAN Nuclear nucleic acid-binding protein C1D OS=Homo sapiens
        GN=C1D PE=1 SV=1

          Length = 141

 Score =  64 bits (155), Expect = 1e-009
 Identities = 36/113 (31%), Positives = 69/113 (61%), Gaps = 8/113 (7%)
 Frame = +3

Query: 135 MEAVKQTLALLEEVKPQLEEMLSLAEPEVLAQMQPLKRAKVMYMLAEATTTIFNLRLRCT 314
           + A + ++  ++E+   L+ M+S++  E+L ++ PL++AKV  + A    ++F + L   
Sbjct:  18 LSAFENSIGAVDEM---LKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQ 74

Query: 315 GVNPDDHRVKSEIERLDVYKEKLQRCMDRSKEPLRPTTVLNRQAATRFIEHSL 473
           GVNP +H VK E+ER+ VY  +++   D+ K        L+R AA+RF++++L
Sbjct:  75 GVNPKEHPVKQELERIRVYMNRVKEITDKKK-----AGKLDRGAASRFVKNAL 122

>sp|Q5RBU4|C1D_PONAB Nuclear nucleic acid-binding protein C1D OS=Pongo abelii
        GN=C1D PE=2 SV=1

          Length = 141

 Score =  64 bits (155), Expect = 1e-009
 Identities = 36/113 (31%), Positives = 69/113 (61%), Gaps = 8/113 (7%)
 Frame = +3

Query: 135 MEAVKQTLALLEEVKPQLEEMLSLAEPEVLAQMQPLKRAKVMYMLAEATTTIFNLRLRCT 314
           + A + ++  ++E+   L+ M+S++  E+L ++ PL++AKV  + A    ++F + L   
Sbjct:  18 LSAFENSIGAVDEM---LKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQ 74

Query: 315 GVNPDDHRVKSEIERLDVYKEKLQRCMDRSKEPLRPTTVLNRQAATRFIEHSL 473
           GVNP +H VK E+ER+ VY  +++   D+ K        L+R AA+RF++++L
Sbjct:  75 GVNPKEHPVKQELERIRVYMNRVKEITDKKK-----AGKLDRGAASRFVKNAL 122

>sp|Q32PE4|C1D_BOVIN Nuclear nucleic acid-binding protein C1D OS=Bos taurus
        GN=C1D PE=2 SV=1

          Length = 141

 Score =  64 bits (154), Expect = 1e-009
 Identities = 35/100 (35%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
 Frame = +3

Query: 174 VKPQLEEMLSLAEPEVLAQMQPLKRAKVMYMLAEATTTIFNLRLRCTGVNPDDHRVKSEI 353
           V   L+ M+S++  E+L ++ PL++AKV  + A    ++F + L   GVNP +H VK E+
Sbjct:  28 VDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEHPVKQEL 87

Query: 354 ERLDVYKEKLQRCMDRSKEPLRPTTVLNRQAATRFIEHSL 473
           ER+ VY  +++   D+ K        L+R AA+RF++++L
Sbjct:  88 ERIRVYMNRVKEITDKKK-----AGKLDRGAASRFVKNAL 122

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 145,264,384,081
Number of Sequences: 518415
Number of Extensions: 145264384081
Number of Successful Extensions: 900894833
Number of sequences better than 0.0: 0