BLASTX 7.6.2
Query= UN41159 /QuerySize=1994
(1993 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G01880.1 | Symbols: | DNA repair protein, put... 711 6e-205
TAIR9_protein||AT3G48900.2 | Symbols: | DNA binding / catalytic... 121 3e-027
TAIR9_protein||AT3G28030.1 | Symbols: UVH3, UVR1 | UVH3 (ULTRAVI... 108 1e-023
TAIR9_protein||AT3G48900.1 | Symbols: | DNA binding / catalytic... 95 1e-019
TAIR9_protein||AT5G26680.1 | Symbols: | endonuclease, putative ... 60 6e-009
TAIR9_protein||AT5G26680.2 | Symbols: | endonuclease, putative ... 60 6e-009
>TAIR9_protein||AT1G01880.1 | Symbols: | DNA repair protein, putative |
chr1:306558-308991 REVERSE
Length = 571
Score = 711 bits (1833), Expect = 6e-205
Identities = 358/486 (73%), Positives = 398/486 (81%), Gaps = 15/486 (3%)
Frame = +2
Query: 86 MGVGGKFWDLVRPYGRNEGSDYLREKRVAVDLSFWIIQHETAVKGFALKPHLRLTFFRTI 265
MGVGG FWDL+RPY + +G D+LR KRVAVDLSFWI+QHETAVKGF LKPHLRLTFFRTI
Sbjct: 1 MGVGGNFWDLLRPYAQQQGFDFLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTI 60
Query: 266 NLFSKFGAYPVFVVDGTPSPLKSHTRISRFYRSSGIDTSSLQ--EGVVSVERNKQFCEWV 439
NLFSKFGAYPVFVVDGTPSPLKS RISRF+RSSGIDT +L + VSVERNK F EWV
Sbjct: 61 NLFSKFGAYPVFVVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKDGVSVERNKLFSEWV 120
Query: 440 TECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGASSVIKSIKPNS 619
ECVELL+LLGIPVLKANGEAEALCAQLNS GFVDACITPDSDAFLFGA VIK IKPNS
Sbjct: 121 RECVELLELLGIPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLFGAMCVIKDIKPNS 180
Query: 620 TEPFECYHMSDIEAGLGLKRRHLIAISLLVGNDFDSGGVSGIGLDKALRIVRAFSEDDIL 799
EPFECYHMS IE+GLGLKR+HLIAISLLVGND+DSGGV GIG+DKALRIVR FSED +L
Sbjct: 181 REPFECYHMSHIESGLGLKRKHLIAISLLVGNDYDSGGVLGIGVDKALRIVREFSEDQVL 240
Query: 800 QRLEDIGKGFKPAVSGGTKSVDVDDDDDGVESSSQMKRRLPHCSRCGHPGSKRSHFKSSC 979
+RL+DIG G +PAV GG KS DDG E S+MK+R PHCSRCGH GSKR+HFKSSC
Sbjct: 241 ERLQDIGNGLQPAVPGGIKS-----GDDGEEFRSEMKKRSPHCSRCGHLGSKRTHFKSSC 295
Query: 980 EHCSSDSGCIKKPLEFTCECSFCTKDRELKEQKKTENWWIKVCDRIALGPDFPNRKIIQL 1159
EHC DSGCIKKPL F CECSFC+KDR+L+EQKKT +WWIKVCD+IAL P+FPNRKII+L
Sbjct: 296 EHCGCDSGCIKKPLGFRCECSFCSKDRDLREQKKTNDWWIKVCDKIALAPEFPNRKIIEL 355
Query: 1160 YLSDS-FTEDGSSMSWGTPDTEMLVDCLVFNLHWDPCYVRKMLLPMLSTIYLREKARSSN 1336
YLSD T DGSSMSWGTPDT MLVD +VF LHWDP YVRKMLLPMLSTIYLREKAR +N
Sbjct: 356 YLSDGLMTGDGSSMSWGTPDTGMLVDLMVFKLHWDPSYVRKMLLPMLSTIYLREKAR-NN 414
Query: 1337 TGNPLLCDQYEFHSIKCMKTRYGHKSFVIRWRKPRSTSGLTP-EKPIVVWEDEEEVVEEE 1513
TG LLCDQYEFHSI +S V+ + S L +P V ++ + + +
Sbjct: 415 TGYALLCDQYEFHSI-----NEPEESIVVLEEEEESVDPLDGLNEPQVQNDNGDCFLLTD 469
Query: 1514 ECVGLL 1531
EC+GL+
Sbjct: 470 ECIGLV 475
Score = 174 bits (441), Expect = 2e-043
Identities = 101/149 (67%), Positives = 114/149 (76%), Gaps = 16/149 (10%)
Frame = +2
Query: 1460 PEKPIVVWEDEEEVVEEEECVGLLDGLNEPQVQDDNGECFLLTDECVGLVQSAFPEETEH 1639
PE+ IVV E+EEE V+ LDGLNEPQVQ+DNG+CFLLTDEC+GLVQSAFP+ETEH
Sbjct: 432 PEESIVVLEEEEESVDP------LDGLNEPQVQNDNGDCFLLTDECIGLVQSAFPDETEH 485
Query: 1640 FLKEKKLRESKKKNVCEGAA----SSSVGAQRSITDFYRSTKAAATPAQSVDTGGSSIAF 1807
FL EKKLRESKKKNV E ++++G QRSITDFYRS K AA QS++TGGSS
Sbjct: 486 FLHEKKLRESKKKNVSEEETATPRATTMGVQRSITDFYRSAKKAAA-GQSIETGGSS--K 542
Query: 1808 ASVEKKRQATSGSFS---KSVRRRLLFG* 1885
AS EKKRQATS S S KSVRRRLLFG*
Sbjct: 543 ASAEKKRQATSTSSSNLTKSVRRRLLFG* 571
>TAIR9_protein||AT3G48900.2 | Symbols: | DNA binding / catalytic/ chromatin
binding / nuclease | chr3:18131854-18136239 FORWARD
Length = 601
Score = 121 bits (301), Expect = 3e-027
Identities = 85/247 (34%), Positives = 123/247 (49%), Gaps = 8/247 (3%)
Frame = +2
Query: 107 WDLVRPYGRNEGSDYLREKRVAVDLSFWIIQHETAVKGFAL---KPHLRLTFFRTINLFS 277
WD++ P + D+L+ KRV VDLS W+++ K + K +LR FF +
Sbjct: 7 WDVLEPCKKTFPLDHLQNKRVCVDLSCWMVELHKVNKSYCATKEKVYLR-GFFHRLRALI 65
Query: 278 KFGAYPVFVVDGTPSPLKSHTRISRFYRSSGIDTSSLQEG-VVSVERN--KQFCEWVTEC 448
+ V DG +K T R I ++ S++RN +F + E
Sbjct: 66 ALNCSIILVSDGAIPGIKVPTYKRRLKARFEIADDGVEPSKETSLKRNMGSEFSCIIKEA 125
Query: 449 VELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGASSVIKSIKPNSTEP 628
+ LGI L EAEA CA LNS DAC + DSD FLFGA +V + I
Sbjct: 126 KVIASTLGILCLDGIEEAEAQCALLNSESLCDACFSFDSDIFLFGAKTVYREICLGEGGY 185
Query: 629 FECYHMSDIEAGLGLKRRHLIAISLLVGNDFDSGGVSGIGLDKALRIVRAFSEDDILQRL 808
CY M DI+ LGL R LIA++LL+G+D+ S GV G+ +KA +VR+ ++ IL+++
Sbjct: 186 VVCYEMDDIKKKLGLGRNSLIALALLLGSDY-SQGVRGLRQEKACELVRSIGDNVILEKV 244
Query: 809 EDIGKGF 829
G F
Sbjct: 245 ASEGLSF 251
>TAIR9_protein||AT3G28030.1 | Symbols: UVH3, UVR1 | UVH3 (ULTRAVIOLET
HYPERSENSITIVE 3); DNA binding / catalytic/ endonuclease/ nuclease/
single-stranded DNA binding | chr3:10424321-10431178 FORWARD
Length = 1480
Score = 108 bits (269), Expect = 1e-023
Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
Frame = +2
Query: 383 SLQEGVVSVERNKQ--FCEWVTECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACIT 556
SL + +ERN + E EC ELL++ GIP + A EAEA CA + VD +T
Sbjct: 906 SLGDEQRKLERNAESVSSEMFAECQELLQIFGIPYIIAPMEAEAQCAFMEQSNLVDGIVT 965
Query: 557 PDSDAFLFGASSVIKSIKPNSTEPFECYHMSDIEAGLGLKRRHLIAISLLVGNDFDSGGV 736
DSD FLFGA SV K+I + + E Y M DIE LGL R +I +++L+G+D+ + G+
Sbjct: 966 DDSDVFLFGARSVYKNIF-DDRKYVETYFMKDIEKELGLSRDKIIRMAMLLGSDY-TEGI 1023
Query: 737 SGIGLDKALRIVRAFSEDDILQRLEDIGKGFKPAVSGGT 853
SGIG+ A+ +V AF E+D LQ+ + + P + G T
Sbjct: 1024 SGIGIVNAIEVVTAFPEEDGLQKFREWVESPDPTILGKT 1062
>TAIR9_protein||AT3G48900.1 | Symbols: | DNA binding / catalytic/ chromatin
binding / nuclease | chr3:18132449-18136239 FORWARD
Length = 537
Score = 95 bits (235), Expect = 1e-019
Identities = 59/144 (40%), Positives = 82/144 (56%), Gaps = 3/144 (2%)
Frame = +2
Query: 404 SVERN--KQFCEWVTECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFL 577
S++RN +F + E + LGI L EAEA CA LNS DAC + DSD FL
Sbjct: 45 SLKRNMGSEFSCIIKEAKVIASTLGILCLDGIEEAEAQCALLNSESLCDACFSFDSDIFL 104
Query: 578 FGASSVIKSIKPNSTEPFECYHMSDIEAGLGLKRRHLIAISLLVGNDFDSGGVSGIGLDK 757
FGA +V + I CY M DI+ LGL R LIA++LL+G+D+ S GV G+ +K
Sbjct: 105 FGAKTVYREICLGEGGYVVCYEMDDIKKKLGLGRNSLIALALLLGSDY-SQGVRGLRQEK 163
Query: 758 ALRIVRAFSEDDILQRLEDIGKGF 829
A +VR+ ++ IL+++ G F
Sbjct: 164 ACELVRSIGDNVILEKVASEGLSF 187
>TAIR9_protein||AT5G26680.1 | Symbols: | endonuclease, putative |
chr5:9311882-9315458 REVERSE
Length = 454
Score = 60 bits (143), Expect = 6e-009
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Frame = +2
Query: 443 ECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGASSVIKSIKPNST 622
+C LL+L+G+PV++A EAEA CA L G V + D D+ FGA ++ + S+
Sbjct: 141 DCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMDSLTFGAPKFLRHLMDPSS 200
Query: 623 E--PFECYHMSDIEAGLGLKRRHLIAISLLVGNDFDSGGVSGIGLDKALRIVRAF-SEDD 793
P + ++ I L L I + +L G D+ + GIG AL+++R S +
Sbjct: 201 RKIPVMEFEVAKILEELQLTMDQFIDLCILSGCDY-CDSIRGIGGQTALKLIRQHGSIET 259
Query: 794 ILQRL 808
IL+ L
Sbjct: 260 ILENL 264
>TAIR9_protein||AT5G26680.2 | Symbols: | endonuclease, putative |
chr5:9311882-9315458 REVERSE
Length = 384
Score = 60 bits (143), Expect = 6e-009
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Frame = +2
Query: 443 ECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGASSVIKSIKPNST 622
+C LL+L+G+PV++A EAEA CA L G V + D D+ FGA ++ + S+
Sbjct: 141 DCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMDSLTFGAPKFLRHLMDPSS 200
Query: 623 E--PFECYHMSDIEAGLGLKRRHLIAISLLVGNDFDSGGVSGIGLDKALRIVRAF-SEDD 793
P + ++ I L L I + +L G D+ + GIG AL+++R S +
Sbjct: 201 RKIPVMEFEVAKILEELQLTMDQFIDLCILSGCDY-CDSIRGIGGQTALKLIRQHGSIET 259
Query: 794 ILQRL 808
IL+ L
Sbjct: 260 ILENL 264
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,381,992,749
Number of Sequences: 33410
Number of Extensions: 20381992749
Number of Successful Extensions: 647962682
Number of sequences better than 0.0: 0
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