BLASTX 7.6.2
Query= UN47975 /QuerySize=1487
(1486 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4... 782 1e-226
TAIR9_protein||AT1G54270.1 | Symbols: EIF4A-2 | EIF4A-2; ATP-dep... 769 1e-222
TAIR9_protein||AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4... 756 1e-218
TAIR9_protein||AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4... 740 9e-214
TAIR9_protein||AT1G72730.1 | Symbols: | eukaryotic translation ... 728 4e-210
TAIR9_protein||AT3G19760.1 | Symbols: | eukaryotic translation ... 496 2e-140
TAIR9_protein||AT1G51380.1 | Symbols: | eukaryotic translation ... 444 1e-124
TAIR9_protein||AT3G61240.1 | Symbols: | DEAD/DEAH box helicase,... 280 3e-075
TAIR9_protein||AT3G61240.2 | Symbols: | DEAD/DEAH box helicase,... 280 3e-075
TAIR9_protein||AT4G00660.2 | Symbols: | DEAD/DEAH box helicase,... 277 2e-074
TAIR9_protein||AT4G00660.1 | Symbols: | DEAD/DEAH box helicase,... 277 2e-074
TAIR9_protein||AT2G45810.1 | Symbols: | DEAD/DEAH box helicase,... 276 3e-074
TAIR9_protein||AT1G55150.1 | Symbols: | DEAD box RNA helicase, ... 212 7e-055
TAIR9_protein||AT3G06480.1 | Symbols: | DEAD box RNA helicase, ... 207 2e-053
TAIR9_protein||AT2G47330.1 | Symbols: | DEAD/DEAH box helicase,... 207 2e-053
TAIR9_protein||AT1G77030.1 | Symbols: | ATP binding / ATP-depen... 205 1e-052
TAIR9_protein||AT5G63120.2 | Symbols: | ethylene-responsive DEA... 192 7e-049
TAIR9_protein||AT3G58510.1 | Symbols: | DEAD box RNA helicase, ... 181 2e-045
TAIR9_protein||AT3G58510.2 | Symbols: | DEAD box RNA helicase, ... 181 2e-045
TAIR9_protein||AT3G58510.3 | Symbols: | DEAD box RNA helicase, ... 181 2e-045
>TAIR9_protein||AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4A1 (EUKARYOTIC
TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation
initiation factor | chr3:4592635-4594128 REVERSE
Length = 413
Score = 782 bits (2019), Expect = 1e-226
Identities = 392/404 (97%), Positives = 401/404 (99%)
Frame = -1
Query: 1420 QFDARQFDQKLNDVLEGQDEFFTSYDESHDSFDAMGLQENLLRGIYAYGFEKPSAIQQRG 1241
QFDARQFDQKLN+VLEGQDEFFTSYD+ H+SFDAMGLQENLLRGIYAYGFEKPSAIQQRG
Sbjct: 10 QFDARQFDQKLNEVLEGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRG 69
Query: 1240 IVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELAQQIEKVMRA 1061
IVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLD++L+QCQALVLAPTRELAQQIEKVMRA
Sbjct: 70 IVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRA 129
Query: 1060 LGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADHIKMFVLDE 881
LGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD+IKMFVLDE
Sbjct: 130 LGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDE 189
Query: 880 ADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTL 701
ADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTL
Sbjct: 190 ADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTL 249
Query: 700 EGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATH 521
EGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR RDHTVSATH
Sbjct: 250 EGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATH 309
Query: 520 GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRS 341
GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGRS
Sbjct: 310 GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRS 369
Query: 340 GRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPSNVADLL* 209
GRFGRKGVAINFVT+DDERMLFDIQKFYNVVVEELPSNVADLL*
Sbjct: 370 GRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNVADLL* 413
>TAIR9_protein||AT1G54270.1 | Symbols: EIF4A-2 | EIF4A-2; ATP-dependent
helicase/ translation initiation factor | chr1:20260495-20262018
FORWARD
Length = 413
Score = 769 bits (1985), Expect = 1e-222
Identities = 386/404 (95%), Positives = 395/404 (97%)
Frame = -1
Query: 1420 QFDARQFDQKLNDVLEGQDEFFTSYDESHDSFDAMGLQENLLRGIYAYGFEKPSAIQQRG 1241
QFD RQFDQ+LN+VL+GQDEFFTSYDE H+SFDAMGLQENLLRGIYAYGFEKPSAIQQRG
Sbjct: 10 QFDTRQFDQRLNEVLDGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRG 69
Query: 1240 IVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELAQQIEKVMRA 1061
IVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDY L+QCQALVLAPTRELAQQIEKVMRA
Sbjct: 70 IVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELAQQIEKVMRA 129
Query: 1060 LGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADHIKMFVLDE 881
LGDY GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDML+RQSLR D IKMFVLDE
Sbjct: 130 LGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDE 189
Query: 880 ADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTL 701
ADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTL
Sbjct: 190 ADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTL 249
Query: 700 EGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATH 521
EGIKQFYVNVEKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR RDHTVSATH
Sbjct: 250 EGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATH 309
Query: 520 GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRS 341
GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGRS
Sbjct: 310 GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRS 369
Query: 340 GRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPSNVADLL* 209
GRFGRKGVAINFVT DD+RMLFDIQKFYNVVVEELPSNVADLL*
Sbjct: 370 GRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSNVADLL* 413
>TAIR9_protein||AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4A1 (EUKARYOTIC
TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation
initiation factor | chr3:4592635-4594094 REVERSE
Length = 403
Score = 756 bits (1950), Expect = 1e-218
Identities = 379/390 (97%), Positives = 387/390 (99%)
Frame = -1
Query: 1378 LEGQDEFFTSYDESHDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQA 1199
LEGQDEFFTSYD+ H+SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQA
Sbjct: 14 LEGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQA 73
Query: 1198 QSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 1019
QSGTGKTATFCSGVLQQLD++L+QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVG
Sbjct: 74 QSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 133
Query: 1018 GTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADHIKMFVLDEADEMLSRGFKDQIY 839
GTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD+IKMFVLDEADEMLSRGFKDQIY
Sbjct: 134 GTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIY 193
Query: 838 DIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEE 659
DIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEE
Sbjct: 194 DIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEE 253
Query: 658 WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMRE 479
WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR RDHTVSATHGDMDQNTRDIIMRE
Sbjct: 254 WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMRE 313
Query: 478 FRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT 299
FRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINFVT
Sbjct: 314 FRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVT 373
Query: 298 KDDERMLFDIQKFYNVVVEELPSNVADLL* 209
+DDERMLFDIQKFYNVVVEELPSNVADLL*
Sbjct: 374 RDDERMLFDIQKFYNVVVEELPSNVADLL* 403
>TAIR9_protein||AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4A1 (EUKARYOTIC
TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation
initiation factor | chr3:4592586-4594128 REVERSE
Length = 416
Score = 740 bits (1908), Expect = 9e-214
Identities = 370/381 (97%), Positives = 379/381 (99%)
Frame = -1
Query: 1420 QFDARQFDQKLNDVLEGQDEFFTSYDESHDSFDAMGLQENLLRGIYAYGFEKPSAIQQRG 1241
QFDARQFDQKLN+VLEGQDEFFTSYD+ H+SFDAMGLQENLLRGIYAYGFEKPSAIQQRG
Sbjct: 10 QFDARQFDQKLNEVLEGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRG 69
Query: 1240 IVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELAQQIEKVMRA 1061
IVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLD++L+QCQALVLAPTRELAQQIEKVMRA
Sbjct: 70 IVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRA 129
Query: 1060 LGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADHIKMFVLDE 881
LGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD+IKMFVLDE
Sbjct: 130 LGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDE 189
Query: 880 ADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTL 701
ADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTL
Sbjct: 190 ADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTL 249
Query: 700 EGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATH 521
EGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR RDHTVSATH
Sbjct: 250 EGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATH 309
Query: 520 GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRS 341
GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGRS
Sbjct: 310 GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRS 369
Query: 340 GRFGRKGVAINFVTKDDERML 278
GRFGRKGVAINFVT+DDERML
Sbjct: 370 GRFGRKGVAINFVTRDDERML 390
>TAIR9_protein||AT1G72730.1 | Symbols: | eukaryotic translation initiation
factor 4A, putative / eIF-4A, putative | chr1:27378040-27379593
REVERSE
Length = 415
Score = 728 bits (1877), Expect = 4e-210
Identities = 365/406 (89%), Positives = 387/406 (95%), Gaps = 2/406 (0%)
Frame = -1
Query: 1420 QFDARQFDQKLNDVL--EGQDEFFTSYDESHDSFDAMGLQENLLRGIYAYGFEKPSAIQQ 1247
Q+D RQFD K+N +L EG++ F+T+YDE DSFDAM LQ +LLRGIYAYGFEKPSAIQQ
Sbjct: 10 QYDPRQFDTKMNAILGEEGEETFYTNYDEVCDSFDAMELQPDLLRGIYAYGFEKPSAIQQ 69
Query: 1246 RGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELAQQIEKVM 1067
RGI+PFCKGLDVIQQAQSGTGKTATFCSGVLQQLD +LVQCQALVLAPTRELAQQIEKVM
Sbjct: 70 RGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRELAQQIEKVM 129
Query: 1066 RALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADHIKMFVL 887
RALGDYLGVK ACVGGTSVREDQR+LQ+GVHVVVGTPGRVFD+L+RQSLRAD IKMFVL
Sbjct: 130 RALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVL 189
Query: 886 DEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDEL 707
DEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFM+KPVRILVKRDEL
Sbjct: 190 DEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDEL 249
Query: 706 TLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSA 527
TLEGIKQFYVNV+KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR RDHTVSA
Sbjct: 250 TLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSA 309
Query: 526 THGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 347
THGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIG
Sbjct: 310 THGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIG 369
Query: 346 RSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPSNVADLL* 209
RSGRFGRKGVAINF+T +DERM+ DIQ+FYNVVVEELPSNVADLL*
Sbjct: 370 RSGRFGRKGVAINFMTSEDERMMADIQRFYNVVVEELPSNVADLL* 415
>TAIR9_protein||AT3G19760.1 | Symbols: | eukaryotic translation initiation
factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase,
putative | chr3:6863790-6866242 FORWARD
Length = 409
Score = 496 bits (1276), Expect = 2e-140
Identities = 244/374 (65%), Positives = 304/374 (81%)
Frame = -1
Query: 1330 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 1151
SF+ MG++E++LRG+Y YGFEKPSAIQQR ++P +G DVI QAQSGTGKT+ V Q
Sbjct: 36 SFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQ 95
Query: 1150 QLDYTLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 971
+D + + QAL+L+PTRELA Q EK ++A+G + ++ HAC+GG SV ED R L+ GVH
Sbjct: 96 VVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVH 155
Query: 970 VVVGTPGRVFDMLKRQSLRADHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 791
VV GTPGRV DM+KR+SLR IK+ +LDE+DEMLSRGFKDQIYD+++ LPP +QV + S
Sbjct: 156 VVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVS 215
Query: 790 ATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 611
AT+P E LE+T KFM++PV+ILVKRDELTLEGIKQF+V VEKEEWK +TLCDLY+TL IT
Sbjct: 216 ATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTIT 275
Query: 610 QSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 431
Q+VIF NT+RKVD+L++KMR + TVS+ HGDM Q RD IM EFRSG SRVLITTD+ A
Sbjct: 276 QAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWA 335
Query: 430 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNV 251
RGIDVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV DD ++L DI+++Y+
Sbjct: 336 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYST 395
Query: 250 VVEELPSNVADLL* 209
++E+P NVADL+*
Sbjct: 396 QIDEMPMNVADLI* 409
>TAIR9_protein||AT1G51380.1 | Symbols: | eukaryotic translation initiation
factor 4A, putative / eIF-4A, putative | chr1:19047960-19049967
FORWARD
Length = 393
Score = 444 bits (1140), Expect = 1e-124
Identities = 217/369 (58%), Positives = 280/369 (75%)
Frame = -1
Query: 1330 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 1151
SFD MG+ + +LRG+Y YG++KPS IQQR +VP KG DVI QAQSGTGKT+ V Q
Sbjct: 23 SFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQ 82
Query: 1150 QLDYTLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 971
++ + + Q LVL+P+RELA Q EK ++A+G + ++ HAC+GG S+ ED + L+ GVH
Sbjct: 83 IVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVH 142
Query: 970 VVVGTPGRVFDMLKRQSLRADHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 791
V GTPGRV+DM+KR SL+ +K+ VLDE+DEMLS+G KDQIYD+++ LP IQV + S
Sbjct: 143 AVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQVCLIS 202
Query: 790 ATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 611
AT+P E LE+T KFM+ PVRILVK DELTLEGIKQ+YV+V+KEEWK +TLCDLY L I
Sbjct: 203 ATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTIN 262
Query: 610 QSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 431
Q++IF NTR+KVDWLT+KMR + VS+ HGD Q RD IM +FRS SRVLI +D+ A
Sbjct: 263 QAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWA 322
Query: 430 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNV 251
RGIDVQ VS VINYD+P PE Y+HRIGR+GRFGR+GVAINFV D + L DI++ Y
Sbjct: 323 RGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDIERHYGT 382
Query: 250 VVEELPSNV 224
+ E+P+++
Sbjct: 383 KIREMPADL 391
>TAIR9_protein||AT3G61240.1 | Symbols: | DEAD/DEAH box helicase, putative
(RH12) | chr3:22666590-22669154 FORWARD
Length = 499
Score = 280 bits (714), Expect = 3e-075
Identities = 158/409 (38%), Positives = 235/409 (57%), Gaps = 5/409 (1%)
Frame = -1
Query: 1441 QDPHQKAQFDARQFDQKLNDVLEGQDEFFTSYD---ESHDSFDAMGLQENLLRGIYAYGF 1271
Q +A DA D K L D + + D + F+ L+ +LL+GIY GF
Sbjct: 85 QTTQPEASSDANGQDWKATLRLPPPDTRYQTADVTATKGNEFEDYFLKRDLLKGIYEKGF 144
Query: 1270 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTREL 1091
EKPS IQ+ I G D++ +A++GTGKT FC VL+++D QA++L PTREL
Sbjct: 145 EKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTREL 204
Query: 1090 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRA 911
A Q +V + L YL ++V GGTS+R+D L VH++VGTPGR+ D+ K+
Sbjct: 205 ALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVL 264
Query: 910 DHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVR 731
M V+DEAD++LS F+ + ++ Q LP Q +FSAT P + + KP
Sbjct: 265 KDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPY- 323
Query: 730 ILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 551
++ D+LTL G+ Q+Y VE E K+ L L+ L I QS+IF N+ +V+ L K+
Sbjct: 324 VINLMDQLTLMGVTQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKIT 382
Query: 550 GRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 371
++ H M Q+ R+ + EFR+G+ R L+ TDL RGID+Q V++VIN+D P
Sbjct: 383 ELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTS 442
Query: 370 ENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPSNV 224
E+YLHR+GRSGRFG G+A+N VT +D ++ ++ ++ +PSN+
Sbjct: 443 ESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIKPIPSNI 491
>TAIR9_protein||AT3G61240.2 | Symbols: | DEAD/DEAH box helicase, putative
(RH12) | chr3:22666590-22669154 FORWARD
Length = 499
Score = 280 bits (714), Expect = 3e-075
Identities = 158/409 (38%), Positives = 235/409 (57%), Gaps = 5/409 (1%)
Frame = -1
Query: 1441 QDPHQKAQFDARQFDQKLNDVLEGQDEFFTSYD---ESHDSFDAMGLQENLLRGIYAYGF 1271
Q +A DA D K L D + + D + F+ L+ +LL+GIY GF
Sbjct: 85 QTTQPEASSDANGQDWKATLRLPPPDTRYQTADVTATKGNEFEDYFLKRDLLKGIYEKGF 144
Query: 1270 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTREL 1091
EKPS IQ+ I G D++ +A++GTGKT FC VL+++D QA++L PTREL
Sbjct: 145 EKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTREL 204
Query: 1090 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRA 911
A Q +V + L YL ++V GGTS+R+D L VH++VGTPGR+ D+ K+
Sbjct: 205 ALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVL 264
Query: 910 DHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVR 731
M V+DEAD++LS F+ + ++ Q LP Q +FSAT P + + KP
Sbjct: 265 KDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPY- 323
Query: 730 ILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 551
++ D+LTL G+ Q+Y VE E K+ L L+ L I QS+IF N+ +V+ L K+
Sbjct: 324 VINLMDQLTLMGVTQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKIT 382
Query: 550 GRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 371
++ H M Q+ R+ + EFR+G+ R L+ TDL RGID+Q V++VIN+D P
Sbjct: 383 ELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTS 442
Query: 370 ENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPSNV 224
E+YLHR+GRSGRFG G+A+N VT +D ++ ++ ++ +PSN+
Sbjct: 443 ESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIKPIPSNI 491
>TAIR9_protein||AT4G00660.2 | Symbols: | DEAD/DEAH box helicase, putative |
chr4:274638-277438 FORWARD
Length = 506
Score = 277 bits (707), Expect = 2e-074
Identities = 146/370 (39%), Positives = 226/370 (61%), Gaps = 2/370 (0%)
Frame = -1
Query: 1333 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 1154
+ F+ L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC VL
Sbjct: 131 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVL 190
Query: 1153 QQLDYTLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 974
+++D QA+++ PTRELA Q +V + LG +L ++V GGTS+++D L V
Sbjct: 191 EKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 250
Query: 973 HVVVGTPGRVFDMLKRQSLRADHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVF 794
H++VGTPGR+ D+ K+ + V+DEAD++LS+ F+ + + LP Q+ +F
Sbjct: 251 HLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMF 310
Query: 793 SATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 614
SAT P + +F++ P ++ DELTL+GI QFY VE E K+ L L+ L I
Sbjct: 311 SATFPVTVKDFKDRFLTNPY-VINLMDELTLKGITQFYAFVE-ERQKIHCLNTLFSKLQI 368
Query: 613 TQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 434
QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL
Sbjct: 369 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 428
Query: 433 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYN 254
RGID+Q V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D L+ I++
Sbjct: 429 TRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 488
Query: 253 VVVEELPSNV 224
++++P ++
Sbjct: 489 TEIKQIPPHI 498
>TAIR9_protein||AT4G00660.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr4:274638-277438 FORWARD
Length = 506
Score = 277 bits (707), Expect = 2e-074
Identities = 146/370 (39%), Positives = 226/370 (61%), Gaps = 2/370 (0%)
Frame = -1
Query: 1333 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 1154
+ F+ L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC VL
Sbjct: 131 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVL 190
Query: 1153 QQLDYTLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 974
+++D QA+++ PTRELA Q +V + LG +L ++V GGTS+++D L V
Sbjct: 191 EKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 250
Query: 973 HVVVGTPGRVFDMLKRQSLRADHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVF 794
H++VGTPGR+ D+ K+ + V+DEAD++LS+ F+ + + LP Q+ +F
Sbjct: 251 HLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMF 310
Query: 793 SATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI 614
SAT P + +F++ P ++ DELTL+GI QFY VE E K+ L L+ L I
Sbjct: 311 SATFPVTVKDFKDRFLTNPY-VINLMDELTLKGITQFYAFVE-ERQKIHCLNTLFSKLQI 368
Query: 613 TQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 434
QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL
Sbjct: 369 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 428
Query: 433 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYN 254
RGID+Q V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D L+ I++
Sbjct: 429 TRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 488
Query: 253 VVVEELPSNV 224
++++P ++
Sbjct: 489 TEIKQIPPHI 498
>TAIR9_protein||AT2G45810.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr2:18859836-18862318 FORWARD
Length = 529
Score = 276 bits (705), Expect = 3e-074
Identities = 155/398 (38%), Positives = 232/398 (58%), Gaps = 5/398 (1%)
Frame = -1
Query: 1414 DARQFDQKLNDVLEGQDEFFTSYD---ESHDSFDAMGLQENLLRGIYAYGFEKPSAIQQR 1244
D+ D K L +D + + D + F+ L+ +LLRGIY GFEKPS IQ+
Sbjct: 124 DSNNEDWKATLKLPPRDNRYQTEDVTATKGNEFEDYFLKRDLLRGIYEKGFEKPSPIQEE 183
Query: 1243 GIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELAQQIEKVMR 1064
I G D++ +A++GTGKT FC L+++D QA++L PTRELA Q +V +
Sbjct: 184 SIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVIQAVILVPTRELALQTSQVCK 243
Query: 1063 ALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADHIKMFVLD 884
L YL ++V GGTS+R+D L VH++VGTPGR+ D+ K+ M V+D
Sbjct: 244 ELSKYLKIEVMVTTGGTSLRDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMD 303
Query: 883 EADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELT 704
EAD++LS F+ I ++ Q LP Q+ +FSAT P +++ KP I+ D+LT
Sbjct: 304 EADKLLSVEFQPSIEELIQFLPESRQILMFSATFPVTVKSFKDRYLKKPY-IINLMDQLT 362
Query: 703 LEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSAT 524
L G+ Q+Y VE E K+ L L+ L I QS+IF N+ +V+ L K+ ++
Sbjct: 363 LMGVTQYYAFVE-ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYI 421
Query: 523 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGR 344
H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P E+YLHR+GR
Sbjct: 422 HAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGR 481
Query: 343 SGRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPS 230
SGRFG G+A+N VT +D ++ ++ ++ +PS
Sbjct: 482 SGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIKPIPS 519
>TAIR9_protein||AT1G55150.1 | Symbols: | DEAD box RNA helicase, putative (RH20)
| chr1:20574634-20577141 FORWARD
Length = 502
Score = 212 bits (538), Expect = 7e-055
Identities = 126/378 (33%), Positives = 198/378 (52%), Gaps = 6/378 (1%)
Frame = -1
Query: 1330 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 1151
SF +G + +L + GF +P+ IQ +G KG D+I A++G+GKT ++ +
Sbjct: 100 SFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIV 159
Query: 1150 QLDYTLVQCQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 986
++ + LVLAPTRELA QI++ G +K GG R L
Sbjct: 160 HVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDL 219
Query: 985 QAGVHVVVGTPGRVFDMLKRQSLRADHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 806
Q GV +V+ TPGR+ DM++ + + VLDEAD ML GF QI I + P Q
Sbjct: 220 QKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQ 279
Query: 805 VGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYE 626
+SAT P E ++++KF+ P ++++ +L + V+V E K L L E
Sbjct: 280 TLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLE 339
Query: 625 TLAI-TQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 449
+ ++ ++F++T++ D +T ++R + HGD Q RD ++ EFRSG S ++
Sbjct: 340 DIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMT 399
Query: 448 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDI 269
TD+ ARG+DV+ V VINYD P E+Y+HRIGR+GR G KG A F T + R ++
Sbjct: 400 ATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKEL 459
Query: 268 QKFYNVVVEELPSNVADL 215
+++ +A +
Sbjct: 460 TNILQEAGQKVSPELASM 477
>TAIR9_protein||AT3G06480.1 | Symbols: | DEAD box RNA helicase, putative |
chr3:1985697-1989666 REVERSE
Length = 1089
Score = 207 bits (526), Expect = 2e-053
Identities = 131/380 (34%), Positives = 201/380 (52%), Gaps = 11/380 (2%)
Frame = -1
Query: 1330 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 1151
+F++ GL +LR + + GF P+ IQ + + D++ A++G+GKT +
Sbjct: 436 TFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFI 495
Query: 1150 QLDYTLVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 983
L + + L+LAPTRELA QI+ G + GG + L+
Sbjct: 496 LLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELE 555
Query: 982 AGVHVVVGTPGRVFDMLKRQSLRADHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 803
G +VV TPGR+ D+L+ + + + + VLDEAD ML GF+ QI I +PP+ Q
Sbjct: 556 RGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQT 615
Query: 802 GVFSATMPPEALEITRKFMSKPVRILVKR-DELTLEGIKQFYVNV---EKEEWKLETLCD 635
+++AT P E +I + PV++ + R DEL YV V ++E +LE +
Sbjct: 616 LMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILR 675
Query: 634 LYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 455
E ++ +IF +T+R D L + GR HGD Q RD ++ +FRSG S V
Sbjct: 676 SQE--RGSKVIIFCSTKRLCDHLARSV-GRHFGAVVIHGDKTQGERDWVLNQFRSGKSCV 732
Query: 454 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLF 275
LI TD+ ARG+D++ + +VINYD PT E+Y+HRIGR+GR G GVA F T+ D +
Sbjct: 733 LIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAP 792
Query: 274 DIQKFYNVVVEELPSNVADL 215
D+ K +++P V D+
Sbjct: 793 DLIKVLEGANQQVPPQVRDI 812
>TAIR9_protein||AT2G47330.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr2:19429083-19431617 REVERSE
Length = 761
Score = 207 bits (525), Expect = 2e-053
Identities = 133/383 (34%), Positives = 205/383 (53%), Gaps = 15/383 (3%)
Frame = -1
Query: 1330 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF-CSGVL 1154
+F+ G ++ I +EKP+AIQ + + G DVI A++G+GKTA F ++
Sbjct: 229 TFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIV 288
Query: 1153 QQLDYTLVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 986
+D +Q ++ APTRELA QI + G++V A GG S E + L
Sbjct: 289 HIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKEL 348
Query: 985 QAGVHVVVGTPGRVFDMLKRQSLRADHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 806
+AG +VV TPGR+ DMLK ++L VLDEAD M GF+ Q+ I + P Q
Sbjct: 349 KAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQ 408
Query: 805 VGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNV-----EKEEWKLETL 641
+FSATMP + ++ R+ +S P+R+ V + E I Q VNV EK W LE L
Sbjct: 409 TLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQ-VVNVIPSDAEKLPWLLEKL 467
Query: 640 CDLYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSS 461
+ + + ++F + + VD + ++ V+A HGD DQ +R +++F+SG
Sbjct: 468 PGMIDEGDV---LVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVH 524
Query: 460 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFG-RKGVAINFVTKDDER 284
VLI TD+ ARG+D++ + V+NYD+ + ++HRIGR+GR G R GVA VT+ + R
Sbjct: 525 HVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREAR 584
Query: 283 MLFDIQKFYNVVVEELPSNVADL 215
++ + +P + DL
Sbjct: 585 FAGELVNSLVAAGQNVPPELTDL 607
>TAIR9_protein||AT1G77030.1 | Symbols: | ATP binding / ATP-dependent helicase/
RNA binding / helicase/ hydrolase, acting on acid anhydrides, in
phosphorus-containing anhydrides / nucleic acid binding |
chr1:28947492-28951526 REVERSE
Length = 892
Score = 205 bits (519), Expect = 1e-052
Identities = 118/370 (31%), Positives = 204/370 (55%), Gaps = 4/370 (1%)
Frame = -1
Query: 1327 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQ 1148
F+++ L N+ I G++ P+ IQ++ + G+DV+ A++G+GKTA F +L++
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 1147 LDYTLVQ--CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 974
L + Q +AL+L+PTR+LA+Q K + LG + ++V VGG S+ + L G
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGP 149
Query: 973 HVVVGTPGRVFDMLKR-QSLRADHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGV 797
V++ TPGR+ +L + ++ V DEAD + GF +Q++ I L Q +
Sbjct: 150 DVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLL 209
Query: 796 FSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLA 617
FSAT+P E + + +P + + + +K ++ V EE L + E ++
Sbjct: 210 FSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTVRPEEKYSALLYLVREHIS 269
Query: 616 I-TQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 440
Q++IFV+T+ V+++ + + S +GDMDQ+ R I + FR+ + +LI TD
Sbjct: 270 SDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTD 329
Query: 439 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKF 260
+ ARGID+ + VIN+D P +P+ ++HR+GR+ R GR G A +FVT +D + D+ F
Sbjct: 330 IAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPEDMPYMLDLHLF 389
Query: 259 YNVVVEELPS 230
+ V P+
Sbjct: 390 LSKPVRPAPT 399
>TAIR9_protein||AT5G63120.2 | Symbols: | ethylene-responsive DEAD box RNA
helicase, putative (RH30) | chr5:25318967-25322071 REVERSE
Length = 592
Score = 192 bits (486), Expect = 7e-049
Identities = 111/303 (36%), Positives = 166/303 (54%), Gaps = 1/303 (0%)
Frame = -1
Query: 1117 LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFD 938
L+LAPTRELA QI++ R G GV+ GG R L+ GV +V+ TPGR+ D
Sbjct: 242 LILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLID 301
Query: 937 MLKRQSLRADHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEIT 758
ML+ Q + VLDEAD ML GF+ QI I + P Q ++SAT P E +
Sbjct: 302 MLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLA 361
Query: 757 RKFMSKPVRILVKRDELTL-EGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRR 581
R+F+ P + ++ +L + I Q V E L L + + ++ +IFV T+R
Sbjct: 362 RQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKR 421
Query: 580 KVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 401
D +T ++R A HGD Q+ RD ++ EF+SG S ++ TD+ ARG+DV+ +
Sbjct: 422 GCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKC 481
Query: 400 VINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPSNVA 221
V+NYD P E+Y+HRIGR+GR G KG+A F T D+ + ++ K + +P ++
Sbjct: 482 VVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTLS 541
Query: 220 DLL 212
L+
Sbjct: 542 ALV 544
>TAIR9_protein||AT3G58510.1 | Symbols: | DEAD box RNA helicase, putative (RH11)
| chr3:21640608-21643464 FORWARD
Length = 613
Score = 181 bits (457), Expect = 2e-045
Identities = 109/323 (33%), Positives = 176/323 (54%), Gaps = 10/323 (3%)
Frame = -1
Query: 1120 ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVF 941
A++L+PTRELA QI + GVKV GGT + + R L+ G ++V TPGR+
Sbjct: 232 AVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLN 291
Query: 940 DMLKRQSLRADHIKMFVLDEADEMLSRGFKDQIYDIFQL--LPPK--IQVGVFSATMPPE 773
D+L+R + I+ LDEAD ML GF+ QI I + +PP+ Q +FSAT P +
Sbjct: 292 DLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQ 351
Query: 772 ALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ----- 608
+ FMS + + V R + + I Q V +E K L DL TQ
Sbjct: 352 IQRLAADFMSNYIFLAVGRVGSSTDLITQ-RVEFVQESDKRSHLMDLLHAQRETQDKQSL 410
Query: 607 SVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 428
+++FV T+R D L + + + ++ HGD Q R++ +R F++G + +L+ TD+ AR
Sbjct: 411 TLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAAR 470
Query: 427 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVV 248
G+D+ V+ V+N+DLP ++Y+HRIGR+GR G+ G+A F +++ ++ + +
Sbjct: 471 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEA 530
Query: 247 VEELPSNVADLL*RRSIITGEER 179
+E+P + R S G++R
Sbjct: 531 NQEVPEWLTRYASRASFGGGKKR 553
>TAIR9_protein||AT3G58510.2 | Symbols: | DEAD box RNA helicase, putative (RH11)
| chr3:21640608-21643464 FORWARD
Length = 613
Score = 181 bits (457), Expect = 2e-045
Identities = 109/323 (33%), Positives = 176/323 (54%), Gaps = 10/323 (3%)
Frame = -1
Query: 1120 ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVF 941
A++L+PTRELA QI + GVKV GGT + + R L+ G ++V TPGR+
Sbjct: 232 AVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLN 291
Query: 940 DMLKRQSLRADHIKMFVLDEADEMLSRGFKDQIYDIFQL--LPPK--IQVGVFSATMPPE 773
D+L+R + I+ LDEAD ML GF+ QI I + +PP+ Q +FSAT P +
Sbjct: 292 DLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQ 351
Query: 772 ALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ----- 608
+ FMS + + V R + + I Q V +E K L DL TQ
Sbjct: 352 IQRLAADFMSNYIFLAVGRVGSSTDLITQ-RVEFVQESDKRSHLMDLLHAQRETQDKQSL 410
Query: 607 SVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 428
+++FV T+R D L + + + ++ HGD Q R++ +R F++G + +L+ TD+ AR
Sbjct: 411 TLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAAR 470
Query: 427 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVV 248
G+D+ V+ V+N+DLP ++Y+HRIGR+GR G+ G+A F +++ ++ + +
Sbjct: 471 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEA 530
Query: 247 VEELPSNVADLL*RRSIITGEER 179
+E+P + R S G++R
Sbjct: 531 NQEVPEWLTRYASRASFGGGKKR 553
>TAIR9_protein||AT3G58510.3 | Symbols: | DEAD box RNA helicase, putative (RH11)
| chr3:21640608-21643464 FORWARD
Length = 613
Score = 181 bits (457), Expect = 2e-045
Identities = 109/323 (33%), Positives = 176/323 (54%), Gaps = 10/323 (3%)
Frame = -1
Query: 1120 ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVF 941
A++L+PTRELA QI + GVKV GGT + + R L+ G ++V TPGR+
Sbjct: 232 AVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLN 291
Query: 940 DMLKRQSLRADHIKMFVLDEADEMLSRGFKDQIYDIFQL--LPPK--IQVGVFSATMPPE 773
D+L+R + I+ LDEAD ML GF+ QI I + +PP+ Q +FSAT P +
Sbjct: 292 DLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQ 351
Query: 772 ALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ----- 608
+ FMS + + V R + + I Q V +E K L DL TQ
Sbjct: 352 IQRLAADFMSNYIFLAVGRVGSSTDLITQ-RVEFVQESDKRSHLMDLLHAQRETQDKQSL 410
Query: 607 SVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 428
+++FV T+R D L + + + ++ HGD Q R++ +R F++G + +L+ TD+ AR
Sbjct: 411 TLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAAR 470
Query: 427 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVV 248
G+D+ V+ V+N+DLP ++Y+HRIGR+GR G+ G+A F +++ ++ + +
Sbjct: 471 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEA 530
Query: 247 VEELPSNVADLL*RRSIITGEER 179
+E+P + R S G++R
Sbjct: 531 NQEVPEWLTRYASRASFGGGKKR 553
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,907,053,864
Number of Sequences: 33410
Number of Extensions: 22907053864
Number of Successful Extensions: 728506909
Number of sequences better than 0.0: 0
|