BLASTX 7.6.2
Query= UN61854 /QuerySize=727
(726 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|147795869|emb|CAN61042.1| hypothetical protein VITISV_037527 ... 107 3e-021
gi|18416739|ref|NP_567745.1| antitermination NusB domain-contain... 87 2e-015
gi|2982469|emb|CAA18233.1| putative protein [Arabidopsis thaliana] 87 2e-015
gi|297799366|ref|XP_002867567.1| antitermination NusB domain-con... 87 2e-015
gi|225435806|ref|XP_002285757.1| PREDICTED: hypothetical protein... 65 7e-009
gi|297746508|emb|CBI16564.3| unnamed protein product [Vitis vini... 65 7e-009
gi|326522879|dbj|BAJ88485.1| predicted protein [Hordeum vulgare ... 63 4e-008
gi|224073118|ref|XP_002303980.1| predicted protein [Populus tric... 61 1e-007
gi|115454421|ref|NP_001050811.1| Os03g0656900 [Oryza sativa Japo... 61 2e-007
gi|125587334|gb|EAZ27998.1| hypothetical protein OsJ_11964 [Oryz... 61 2e-007
gi|194688732|gb|ACF78450.1| unknown [Zea mays] 59 5e-007
gi|226509228|ref|NP_001150841.1| LOC100284474 [Zea mays] 59 5e-007
gi|226503425|ref|NP_001146234.1| hypothetical protein LOC1002798... 59 5e-007
gi|223943803|gb|ACN25985.1| unknown [Zea mays] 59 5e-007
gi|242038659|ref|XP_002466724.1| hypothetical protein SORBIDRAFT... 59 5e-007
gi|255636077|gb|ACU18383.1| unknown [Glycine max] 57 3e-006
gi|255564810|ref|XP_002523399.1| RNA binding protein, putative [... 56 5e-006
>gi|147795869|emb|CAN61042.1| hypothetical protein VITISV_037527 [Vitis
vinifera]
Length = 360
Score = 107 bits (265), Expect = 3e-021
Identities = 66/114 (57%), Positives = 76/114 (66%), Gaps = 11/114 (9%)
Frame = -1
Query: 621 QSAPAGRILEFSILHLAMSEIAVIETRHPIVINEV-----SLSLSLSLASVKL*NAMTL* 457
++ PAGRILE ILHLAMSEIAV+ TRH IVINEV SLS S L + ++TL
Sbjct: 251 KNEPAGRILELCILHLAMSEIAVLGTRHQIVINEVNSFSFSLSFSHDLPVKCISTSLTLI 310
Query: 456 TKHC*NNDVEKAVDLAKRFCDGSAPRIINGCLRTFVKDRSPTPTPQALELKQEM 295
+ KAVDLAKRFCDG+APRIINGCLRTFVKD T +A E QE+
Sbjct: 311 WL------LMKAVDLAKRFCDGAAPRIINGCLRTFVKDLEGTGITRASETTQEV 358
>gi|18416739|ref|NP_567745.1| antitermination NusB domain-containing protein
[Arabidopsis thaliana]
Length = 301
Score = 87 bits (214), Expect = 2e-015
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = -1
Query: 432 VEKAVDLAKRFCDGSAPRIINGCLRTFVKDRSPTPTPQALELKQEMSV 289
+ +AVDLAKRFCDGSAPRIINGCLRTFVKDR+ T TPQALELKQE+SV
Sbjct: 254 INEAVDLAKRFCDGSAPRIINGCLRTFVKDRATTSTPQALELKQEVSV 301
Score = 65 bits (158), Expect = 7e-009
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = -1
Query: 621 QSAPAGRILEFSILHLAMSEIAVIETRHPIVINE 520
+SAPAGRILEFSILHLAMSE+AV+ETRHPIVINE
Sbjct: 223 KSAPAGRILEFSILHLAMSEVAVLETRHPIVINE 256
>gi|2982469|emb|CAA18233.1| putative protein [Arabidopsis thaliana]
Length = 286
Score = 87 bits (214), Expect = 2e-015
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = -1
Query: 432 VEKAVDLAKRFCDGSAPRIINGCLRTFVKDRSPTPTPQALELKQEMSV 289
+ +AVDLAKRFCDGSAPRIINGCLRTFVKDR+ T TPQALELKQE+SV
Sbjct: 239 INEAVDLAKRFCDGSAPRIINGCLRTFVKDRATTSTPQALELKQEVSV 286
Score = 65 bits (158), Expect = 7e-009
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = -1
Query: 621 QSAPAGRILEFSILHLAMSEIAVIETRHPIVINE 520
+SAPAGRILEFSILHLAMSE+AV+ETRHPIVINE
Sbjct: 208 KSAPAGRILEFSILHLAMSEVAVLETRHPIVINE 241
>gi|297799366|ref|XP_002867567.1| antitermination NusB domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 300
Score = 87 bits (214), Expect = 2e-015
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = -1
Query: 432 VEKAVDLAKRFCDGSAPRIINGCLRTFVKDRSPTPTPQALELKQEMSV 289
+ +AVDLAKRFCDGSAPRIINGCLRTFVKDR+ T TPQALELKQE+SV
Sbjct: 253 INEAVDLAKRFCDGSAPRIINGCLRTFVKDRAATSTPQALELKQEVSV 300
Score = 65 bits (158), Expect = 7e-009
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = -1
Query: 621 QSAPAGRILEFSILHLAMSEIAVIETRHPIVINE 520
+SAPAGRILEFSILHLAMSE+AV+ETRHPIVINE
Sbjct: 222 KSAPAGRILEFSILHLAMSEVAVLETRHPIVINE 255
>gi|225435806|ref|XP_002285757.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 288
Score = 65 bits (158), Expect = 7e-009
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -1
Query: 432 VEKAVDLAKRFCDGSAPRIINGCLRTFVKDRSPTPTPQALELKQEM 295
+ +AVDLAKRFCDG+APRIINGCLRTFVKD T +A E QE+
Sbjct: 241 INEAVDLAKRFCDGAAPRIINGCLRTFVKDLEGTGITRASETTQEV 286
>gi|297746508|emb|CBI16564.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 65 bits (158), Expect = 7e-009
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -1
Query: 432 VEKAVDLAKRFCDGSAPRIINGCLRTFVKDRSPTPTPQALELKQEM 295
+ +AVDLAKRFCDG+APRIINGCLRTFVKD T +A E QE+
Sbjct: 171 INEAVDLAKRFCDGAAPRIINGCLRTFVKDLEGTGITRASETTQEV 216
>gi|326522879|dbj|BAJ88485.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 275
Score = 63 bits (151), Expect = 4e-008
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = -1
Query: 432 VEKAVDLAKRFCDGSAPRIINGCLRTFVKDRSPTPTPQALELK 304
+ +AVDLAKRFCDG APR+INGCLRT+VKD T Q E K
Sbjct: 232 INEAVDLAKRFCDGGAPRVINGCLRTYVKDHMSNGTSQTAESK 274
>gi|224073118|ref|XP_002303980.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 61 bits (147), Expect = 1e-007
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = -1
Query: 432 VEKAVDLAKRFCDGSAPRIINGCLRTFVKDRSPTPTPQALELKQEMSV 289
+ +AVDLAKRFCDG+ PRIINGCLRTF+KD S Q + +++ V
Sbjct: 171 INEAVDLAKRFCDGAGPRIINGCLRTFLKDLSGASVAQTSDANEKVEV 218
>gi|115454421|ref|NP_001050811.1| Os03g0656900 [Oryza sativa Japonica Group]
Length = 287
Score = 61 bits (146), Expect = 2e-007
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = -1
Query: 432 VEKAVDLAKRFCDGSAPRIINGCLRTFVKDRSPTPTPQ 319
+ +AVDLAKRFCDG APR+INGCLRTFVKD T Q
Sbjct: 242 INEAVDLAKRFCDGGAPRVINGCLRTFVKDHMNIDTSQ 279
>gi|125587334|gb|EAZ27998.1| hypothetical protein OsJ_11964 [Oryza sativa
Japonica Group]
Length = 287
Score = 61 bits (146), Expect = 2e-007
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = -1
Query: 432 VEKAVDLAKRFCDGSAPRIINGCLRTFVKDRSPTPTPQ 319
+ +AVDLAKRFCDG APR+INGCLRTFVKD T Q
Sbjct: 242 INEAVDLAKRFCDGGAPRVINGCLRTFVKDHMNIDTSQ 279
>gi|194688732|gb|ACF78450.1| unknown [Zea mays]
Length = 284
Score = 59 bits (142), Expect = 5e-007
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -1
Query: 432 VEKAVDLAKRFCDGSAPRIINGCLRTFVKD 343
+ +AVDLAKRFCDG APR+INGCLRTFVKD
Sbjct: 240 INEAVDLAKRFCDGGAPRVINGCLRTFVKD 269
>gi|226509228|ref|NP_001150841.1| LOC100284474 [Zea mays]
Length = 280
Score = 59 bits (142), Expect = 5e-007
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -1
Query: 432 VEKAVDLAKRFCDGSAPRIINGCLRTFVKD 343
+ +AVDLAKRFCDG APR+INGCLRTFVKD
Sbjct: 240 INEAVDLAKRFCDGGAPRVINGCLRTFVKD 269
>gi|226503425|ref|NP_001146234.1| hypothetical protein LOC100279806 [Zea mays]
Length = 174
Score = 59 bits (142), Expect = 5e-007
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -1
Query: 432 VEKAVDLAKRFCDGSAPRIINGCLRTFVKD 343
+ +AVDLAKRFCDG APR+INGCLRTFVKD
Sbjct: 130 INEAVDLAKRFCDGGAPRVINGCLRTFVKD 159
>gi|223943803|gb|ACN25985.1| unknown [Zea mays]
Length = 284
Score = 59 bits (142), Expect = 5e-007
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -1
Query: 432 VEKAVDLAKRFCDGSAPRIINGCLRTFVKD 343
+ +AVDLAKRFCDG APR+INGCLRTFVKD
Sbjct: 240 INEAVDLAKRFCDGGAPRVINGCLRTFVKD 269
>gi|242038659|ref|XP_002466724.1| hypothetical protein SORBIDRAFT_01g012890
[Sorghum bicolor]
Length = 284
Score = 59 bits (142), Expect = 5e-007
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -1
Query: 432 VEKAVDLAKRFCDGSAPRIINGCLRTFVKD 343
+ +AVDLAKRFCDG APR+INGCLRTFVKD
Sbjct: 240 INEAVDLAKRFCDGGAPRVINGCLRTFVKD 269
>gi|255636077|gb|ACU18383.1| unknown [Glycine max]
Length = 289
Score = 57 bits (135), Expect = 3e-006
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Frame = -1
Query: 507 LSLSLASVKL*NAMTL*TKHC*NNDVEKAVDLAKRFCDGSAPRIINGCLRTFVKD 343
L LS+ + + L T+H + +AVDLAKRFCDG+APRIINGCLRTF ++
Sbjct: 227 LELSILHLAMSEMEVLETRH--QIVINEAVDLAKRFCDGAAPRIINGCLRTFFRE 279
>gi|255564810|ref|XP_002523399.1| RNA binding protein, putative [Ricinus
communis]
Length = 309
Score = 56 bits (133), Expect = 5e-006
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -1
Query: 621 QSAPAGRILEFSILHLAMSEIAVIETRHPIVINEVSLSLSLSLASVKL 478
+S P GRILEF ILHLAMSEIAV+ TRH IVINE + +S S +KL
Sbjct: 240 KSQPGGRILEFCILHLAMSEIAVVGTRHQIVINEFAF-VSKSSEQLKL 286
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,207,290,166,940
Number of Sequences: 15229318
Number of Extensions: 6207290166940
Number of Successful Extensions: 1469931442
Number of sequences better than 0.0: 0
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