BLASTX 7.6.2
Query= UN76145 /QuerySize=783
(782 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G14510.1 | Symbols: | RNA binding | chr4:8337... 372 2e-103
TAIR9_protein||AT3G23070.1 | Symbols: | RNA binding | chr3:8203... 322 2e-088
TAIR9_protein||AT3G01370.1 | Symbols: ATCFM2, CFM2 | ATCFM2 (CRM... 200 1e-051
TAIR9_protein||AT4G29750.1 | Symbols: | RNA binding | chr4:1456... 192 3e-049
TAIR9_protein||AT3G18390.1 | Symbols: EMB1865 | EMB1865 (embryo ... 173 1e-043
TAIR9_protein||AT5G16180.1 | Symbols: CRS1, ATCRS1 | CRS1 (ARABI... 136 2e-032
TAIR9_protein||AT3G25440.1 | Symbols: | RNA binding | chr3:9223... 96 3e-020
TAIR9_protein||AT3G25440.2 | Symbols: | RNA binding | chr3:9224... 96 3e-020
TAIR9_protein||AT3G27550.1 | Symbols: | group II intron splicin... 91 6e-019
TAIR9_protein||AT2G28480.1 | Symbols: | RNA binding | chr2:1217... 91 7e-019
TAIR9_protein||AT4G13070.1 | Symbols: | group II intron splicin... 90 2e-018
>TAIR9_protein||AT4G14510.1 | Symbols: | RNA binding | chr4:8337390-8341057
REVERSE
Length = 933
Score = 372 bits (954), Expect = 2e-103
Identities = 197/253 (77%), Positives = 215/253 (84%), Gaps = 16/253 (6%)
Frame = +2
Query: 2 DTEGITEEERFVFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKSFEG 181
D EGITEEERF+FQKLGL+MKAFLLLGRRGVFDGTVENMHLHWKYREL+KILVKAK+ EG
Sbjct: 686 DLEGITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKTLEG 745
Query: 182 AQKVALALEAESGGILVSVDKISKGYAIIVYRGKDYKRPSELRPKNLLTKRKALARSVEL 361
AQKVA+ALEAESGGILVSVDKISKGYA+IVYRGKDYKRP+ LRPKNLLTKRKALARS+EL
Sbjct: 746 AQKVAMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRKALARSLEL 805
Query: 362 QRRQGIIKHIAVVQARTEQLRAEIEQVELVKDKGDQVLYNKLDMAYSSSDEETEETDGEG 541
Q+R+ +IKHI +Q R+EQLRAEIEQVELVKDKGD+ LY+KLDMAY SSDEETEETDGE
Sbjct: 806 QKREALIKHIEAIQTRSEQLRAEIEQVELVKDKGDETLYDKLDMAY-SSDEETEETDGEE 864
Query: 542 DDIYLDTYE---EDSEEGGIQAKGSLS--DVEFDSDDEDWDSDELETEFDDDDDDSASST 706
DD+YLDTYE ED EEGGIQA GSLS DVEF SD+ D D D+SASST
Sbjct: 865 DDVYLDTYEDEGEDDEEGGIQANGSLSETDVEFGSDESD----------TDFGDNSASST 914
Query: 707 APEATSGNLHNEE 745
PE T L NEE
Sbjct: 915 TPETTFVELQNEE 927
>TAIR9_protein||AT3G23070.1 | Symbols: | RNA binding | chr3:8203548-8207243
FORWARD
Length = 882
Score = 322 bits (824), Expect = 2e-088
Identities = 167/229 (72%), Positives = 197/229 (86%), Gaps = 9/229 (3%)
Frame = +2
Query: 2 DTEGITEEERFVFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKSFEG 181
D E IT+EERF+F+KLGL+MKAFLLLGRRGVFDGTVENMHLHWKYRELVKI+VKAK+F+G
Sbjct: 634 DPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDG 693
Query: 182 AQKVALALEAESGGILVSVDKISKGYAIIVYRGKDYKRPSELRPKNLLTKRKALARSVEL 361
+KVALALEAESGGILVS+DK++KGYAIIVYRG+DYKRP+ LRPKNLLTKRKALARS+EL
Sbjct: 694 VKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIEL 753
Query: 362 QRRQGIIKHIAVVQARTEQLRAEIEQVELVKDKGDQVLYNKLDMAYSSSDEETEETDGEG 541
QRR+G++KHI+ +QA+ +QLRAEIEQ+E V DKGD+ LYNKLDMAY+SSDEET+E D
Sbjct: 754 QRREGLLKHISTMQAKAKQLRAEIEQMEKVTDKGDEELYNKLDMAYASSDEETDEED--D 811
Query: 542 DDIYLDTYE--EDSEEGGIQAKGSLSDVEFDSDDEDWDSDELETEFDDD 682
DD + +TY ED EEG I A G LS+ E D+D DS+E ET F DD
Sbjct: 812 DDAFPETYAEGEDGEEGEILA-GELSETE----DKDLDSNESETGFGDD 855
>TAIR9_protein||AT3G01370.1 | Symbols: ATCFM2, CFM2 | ATCFM2 (CRM FAMILY MEMBER
2); RNA binding | chr3:139033-143477 FORWARD
Length = 1012
Score = 200 bits (507), Expect = 1e-051
Identities = 114/244 (46%), Positives = 153/244 (62%), Gaps = 12/244 (4%)
Frame = +2
Query: 2 DTEGITEEERFVFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKSFEG 181
D EGIT +E+++ +K+GL+MK FLLLGRRGVFDGT+ENMHLHWKYRELVKI+ S E
Sbjct: 575 DKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEA 634
Query: 182 AQKVALALEAESGGILVSVDKISKGYAIIVYRGKDYKRPSELRPKNLLTKRKALARSVEL 361
A KVA LEAESGGILV+V+ +SKGYAIIVYRGK+Y+RP LRP+ LL+KR+AL RSVE
Sbjct: 635 AHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVEA 694
Query: 362 QRRQGIIKHIAVVQARTEQLRAEIEQVELVKDKGDQVLYNKLDMAYSSSDEETEETDGEG 541
QRR+ + H+ + E+L +LV+D ++ + + +EETE E
Sbjct: 695 QRRKSLKLHVLKLSNNIEELNR-----QLVEDSATNETWSDGESSNMMVEEETENQHTEP 749
Query: 542 DDIYLDTYEEDSEEGGIQAKGSLSDVEFDSDDEDWDSDELET---EFDDDDDDSASSTAP 712
+ S + + + G E DD + + D L T E+ +D+ +SASS
Sbjct: 750 EKAREKIELGYSSDLSVPSSGE----ENWEDDSEGEVDPLTTSSQEYQEDESESASSQRH 805
Query: 713 EATS 724
E S
Sbjct: 806 EGNS 809
>TAIR9_protein||AT4G29750.1 | Symbols: | RNA binding | chr4:14569728-14572804
FORWARD
Length = 777
Score = 192 bits (486), Expect = 3e-049
Identities = 96/174 (55%), Positives = 131/174 (75%), Gaps = 3/174 (1%)
Frame = +2
Query: 2 DTEGITEEERFVFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKSFEG 181
D+E ITEEER +++K+GL M FLLLGRR V+DGT+ENMHLHWK+RELVK++V+ KS
Sbjct: 601 DSEIITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHWKHRELVKVIVRGKSLPQ 660
Query: 182 AQKVALALEAESGGILVSVDKISKGYAIIVYRGKDYKRPSELRPKNLLTKRKALARSVEL 361
+ +A++LEAESGG+LVSVDK KGYAII+YRGK+Y+ P LRP NLLT++KA ARS+EL
Sbjct: 661 VKHIAISLEAESGGVLVSVDKTMKGYAIILYRGKNYQMPFRLRPSNLLTRKKAFARSIEL 720
Query: 362 QRRQGIIKHIAVVQARTEQLRAEIEQVELVKDKGDQV---LYNKLDMAYSSSDE 514
QRR+ + H+A ++ R E L+ + ++K D+ LY ++D + SSDE
Sbjct: 721 QRREALKYHVADLEERIELLKTGQDDDMETRNKSDEEEENLYLRVDESDFSSDE 774
>TAIR9_protein||AT3G18390.1 | Symbols: EMB1865 | EMB1865 (embryo defective
1865); RNA binding | chr3:6313572-6317584 FORWARD
Length = 849
Score = 173 bits (438), Expect = 1e-043
Identities = 89/188 (47%), Positives = 131/188 (69%), Gaps = 11/188 (5%)
Frame = +2
Query: 2 DTEGITEEERFVFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKSFEG 181
D E I+EEER +F+K+GL+MKA+L +G RGVFDG +ENMHLHWK+RELVK++ K K+
Sbjct: 649 DQEVISEEERAMFRKVGLKMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKNQAF 708
Query: 182 AQKVALALEAESGGILVSVDKISKGYAIIVYRGKDYKRPSELRPKNLLTKRKALARSVEL 361
++ A LE ESGG+LV+++K+ KG+A+I YRGK+Y+RP LRP+NLLTK KAL RS+ +
Sbjct: 709 VEETARLLEYESGGVLVAIEKVPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAM 768
Query: 362 QRRQGIIKHIAVVQARTEQLRAEI---------EQVELVKDKGDQVLYNKLDMAYSSSDE 514
QR + + +HI+ ++ EQ+++++ + E +D D K D+ + SD
Sbjct: 769 QRHEALSQHISELERTIEQMQSQLTSKNPSYSESEWENDEDDDDDEEEEKDDVEDNESD- 827
Query: 515 ETEETDGE 538
+ETDGE
Sbjct: 828 -WDETDGE 834
>TAIR9_protein||AT5G16180.1 | Symbols: CRS1, ATCRS1 | CRS1 (ARABIDOPSIS ORTHOLOG
OF MAIZE CHLOROPLAST SPLICING FACTOR CRS1); RNA splicing factor,
transesterification mechanism | chr5:5279884-5282898 FORWARD
Length = 721
Score = 136 bits (341), Expect = 2e-032
Identities = 71/150 (47%), Positives = 103/150 (68%), Gaps = 3/150 (2%)
Frame = +2
Query: 2 DTEGITEEERFVFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKSFEG 181
D E +T EER +++GL+M + L+LGRRGVF G +E +H HWK+RE+ K++ K F
Sbjct: 568 DIEILTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITMQKLFSR 627
Query: 182 AQKVALALEAESGGILVSVDKISKGYAIIVYRGKDYKRP-SELRPKNLLTKRKALARSVE 358
A ALE ES G+L+S++K+ +G+AI++YRGK+YKRP S+L +NLLTKRKAL RSV
Sbjct: 628 VVYTAKALETESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQNLLTKRKALQRSVV 687
Query: 359 LQRRQGIIKHIAVVQART-EQLRAEIEQVE 445
+Q R G +K A + R E L+ + ++
Sbjct: 688 MQ-RLGSLKFFAYQRERAIEDLKVSLVNLQ 716
>TAIR9_protein||AT3G25440.1 | Symbols: | RNA binding | chr3:9223998-9225505
FORWARD
Length = 445
Score = 96 bits (236), Expect = 3e-020
Identities = 59/195 (30%), Positives = 109/195 (55%), Gaps = 11/195 (5%)
Frame = +2
Query: 2 DTEGITEEERFVFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKSFEG 181
D E +T EE F + K+GL+ K ++ +GRRG++ G + NMHLHWK + +++++K + +
Sbjct: 173 DPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDE 232
Query: 182 AQKVALALEAESGGILVSVDKISKGYAIIVYRGKDYKRPSE--LRPKNLLTKRKALARSV 355
+++A+ L +GGI++ V +G II+YRGK+Y +P + P+ L ++KAL +S
Sbjct: 233 VKEIAVELARLTGGIVLDV---HEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSK 289
Query: 356 ELQRRQGIIKHIAVVQARTEQLRAEIE---QVELVKDKGDQVLYNKLDMAYSSSD---EE 517
+ + K+I ++ + L+A+ E VK +Q +L S+ E+
Sbjct: 290 CRDALRAVRKYIPRLEQELQLLQAQAETKRDYTNVKVDDNQERSEELKKIIERSEECLED 349
Query: 518 TEETDGEGDDIYLDT 562
+E D G ++ D+
Sbjct: 350 EQEEDEAGLELATDS 364
>TAIR9_protein||AT3G25440.2 | Symbols: | RNA binding | chr3:9224294-9225505
FORWARD
Length = 381
Score = 96 bits (236), Expect = 3e-020
Identities = 59/195 (30%), Positives = 109/195 (55%), Gaps = 11/195 (5%)
Frame = +2
Query: 2 DTEGITEEERFVFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKSFEG 181
D E +T EE F + K+GL+ K ++ +GRRG++ G + NMHLHWK + +++++K + +
Sbjct: 109 DPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDE 168
Query: 182 AQKVALALEAESGGILVSVDKISKGYAIIVYRGKDYKRPSE--LRPKNLLTKRKALARSV 355
+++A+ L +GGI++ V +G II+YRGK+Y +P + P+ L ++KAL +S
Sbjct: 169 VKEIAVELARLTGGIVLDV---HEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSK 225
Query: 356 ELQRRQGIIKHIAVVQARTEQLRAEIE---QVELVKDKGDQVLYNKLDMAYSSSD---EE 517
+ + K+I ++ + L+A+ E VK +Q +L S+ E+
Sbjct: 226 CRDALRAVRKYIPRLEQELQLLQAQAETKRDYTNVKVDDNQERSEELKKIIERSEECLED 285
Query: 518 TEETDGEGDDIYLDT 562
+E D G ++ D+
Sbjct: 286 EQEEDEAGLELATDS 300
>TAIR9_protein||AT3G27550.1 | Symbols: | group II intron splicing factor
CRS1-related | chr3:10208010-10209899 REVERSE
Length = 492
Score = 91 bits (225), Expect = 6e-019
Identities = 44/117 (37%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Frame = +2
Query: 2 DTEGITEEERFVFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKSFEG 181
D E T E+ F+K+G + K ++ +G RGVF G V+NMH+HWK+ E V++ E
Sbjct: 88 DPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKEK 147
Query: 182 AQKVALALEAESGGILVSVDKISKGYAIIVYRGKDYKRPSELRPKNLLTKRKALARS 352
+++A + SGG+++++ + II++RG++Y++P L P N LTKRKAL ++
Sbjct: 148 IKEMASMIARLSGGVVINIHNVK---TIIMFRGRNYRQPKNLIPVNTLTKRKALFKA 201
>TAIR9_protein||AT2G28480.1 | Symbols: | RNA binding | chr2:12176642-12178031
REVERSE
Length = 373
Score = 91 bits (224), Expect = 7e-019
Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Frame = +2
Query: 14 ITEEERFVFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKSFEGAQKV 193
IT EERF +K+G + ++ +GRRGVF G + NMHLHWK E VK++ Q+
Sbjct: 164 ITGEERFYLKKMGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQY 223
Query: 194 ALALEAESGGILVSVDKISKGYAIIVYRGKDYKRPSELRPKNLLTKRKALARSVELQRRQ 373
A L SGG+ V+ I II YRGK Y +P + P + L+K++A +S Q +
Sbjct: 224 AEELAKLSGGVPVN---IIGDDTIIFYRGKGYVQPQVMSPIDTLSKKRAYEKSKYEQSLE 280
Query: 374 GIIKHIAVVQARTEQLRAEIEQVELVKDKGDQVLYNKLDMAYSSSDEETE--------ET 529
+ IA+ + ++L V L D ++ + LD + S S + E +T
Sbjct: 281 SVRHFIAIAE---KELELYYRHVALYDDPNNRNPLSILDDSPSESRQHHENEFFLSCSDT 337
Query: 530 DGEGDDIYLDTYEEDSEE 583
D +D E++ EE
Sbjct: 338 DSSSED------EDEDEE 349
>TAIR9_protein||AT4G13070.1 | Symbols: | group II intron splicing factor
CRS1-related | chr4:7621780-7623051 REVERSE
Length = 344
Score = 90 bits (221), Expect = 2e-018
Identities = 56/147 (38%), Positives = 83/147 (56%), Gaps = 11/147 (7%)
Frame = +2
Query: 2 DTEGITEEERFVFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKILVKAKSFEG 181
D E +TEEE+ ++ G + K F+L+GRRGVF G V N+HLHWK E VK++ K + G
Sbjct: 178 DPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPG 237
Query: 182 -AQKVALALEAESGGILVSVDKISKGYAIIVYRGKDYKRPSELRPKNLLTKRKALARSVE 358
+ A L S GI++ V I++YRGK+Y RP + P + L+K KAL E
Sbjct: 238 QVHEYAEELARLSKGIVIDV---KPNNTIVLYRGKNYVRPEVMSPVDTLSKDKAL----E 290
Query: 359 LQRRQGIIKHIAVVQARTEQLRAEIEQ 439
R + ++H + E+L E+E+
Sbjct: 291 KYRYEQSLEHTSEF---IEKLEKELEE 314
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,854,733,733
Number of Sequences: 33410
Number of Extensions: 32854733733
Number of Successful Extensions: 1103636993
Number of sequences better than 0.0: 0
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