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Information for unigene UN00520

FASTA Sequence
Unigene ID: UN00520Length: 1199 SSR 
GGGAACAAAGCAAAAAGAAAGAATCTATTATTTTACATTTTCGCCTCAAGATTCCGTTTCTGAACATTTACACCCTCACGCCATGT
GTGGAGGAGCTATAATCTCCGATTTCATCCCGCCGCCGAGGTCTCGCCGCGTCACCAGCGAGTTTCTCTGGCCGGATCTGAAGAAG
AAGAAGAGCTCGAGGAAACGCTCCTCGAGTTTCTTCGATCTTGACGATGAGTTCGAGGCTGACTTCCAGGGCTTCAACGACGATTC
CTTCATCGACTGCGATGATGCGAAACCGTTCGTTTTCGCCGGGGCTCGTAAACCCCCCGCCGCCACTGCCGCCGATTCAGCTTTTG
GCAAGAAAGTTGCTGACGGAGAAGGTGAGAGATCTGCAAAGAGGAAGAGGAAGAGCCAGTACCGAGGTATAAGACAACGTCCTTGG
GGAAAATGGGCTGCTGAGATTCGTGATCCAAGGGAAGGTTCAAGAGTGTGGCTTGGAACTTTCAAAACTGCCGAGGAAGCTGCAAG
AGCTTACGATGCTGCAGCTCGTAGAATCCGTGGTTCCAAAGCTAAGGTGAATTTCCCAGAGGAGAACCCACTTGCCAAGAAGGTGG
CTAAACCGAACCCAAACCCAACTCTGGTTCAGAACGTGGACAACTCCTTTGACAATATATGTTTCATGGAGGAGAAACAAGAAGTT
AACAGCAGCAACAACAACAACAATCAATTTGGTAATGGGTATCATCAGTTATTCAGCTCAGACCAGGGTAGTAACTCATTTGGTTG
TTCTGAGTTTGGTTGGAACGATCAAGCTCCTATAACTCCTGAGATCTCTTCGGCGTTTATCAACAACAACAACTCTGCTCTATTCG
CCGAGGAAGCTGATCCAGCTAAGAAGCTCAAGTCCATGGATTTCGAGACACCTTACAACAACACTGAATGGGATTCTTCACTTGAT
TTCTTCAACGAAGACGCCGTGGCGACTCAGGACAATGGTGCAAACCCTATGGAACTATGGAGCATTGATGAGATCGATTCCATGAT
TGGAGGAGTCTTCTGAAGAGATCCATTGTCATTTAAAACATTTTGAACTCTTTCTGGTGGTCTCTTGTATTCGCTTGTGTTTTGGT
TCTTTCACTTTGTGCACCCAAGCGTCTCCTTTAAACATTGTCATAACTCATAAGTTAATATGTTGACCTAATGTTCTGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34297 unnamed protein product [Thellungiella halophila]13283e-144
AAM65746 AP2 domain containing protein, putative [Arabidopsis thaliana]12971e-140
NP_175794 ethylene-responsive transcription factor RAP2-12 [Arabidopsis thaliana]12943e-140
AAC49778 AP2 domain containing protein RAP2.12 [Arabidopsis thaliana]11358e-122
XP_002891780 hypothetical protein ARALYDRAFT_892441 [Arabidopsis lyrata subsp. lyrata]6869e-070

Swiss-Prot top hits (Blast detail)Scoree value
Q9SSA8 Ethylene-responsive transcription factor RAP2-1212941e-141
Q6K7E6 Ethylene-responsive transcription factor 14212e-040
Q9LUM4 Ethylene-responsive transcription factor RAP2-23702e-034
O22259 Ethylene-responsive transcription factor ERF0713056e-027
P42736 Ethylene-responsive transcription factor RAP2-32894e-025

TrEMBL top hits (Blast detail)Scoree value
B9DG10 AT1G53910 protein12942e-140
B9N7H5 AP2/ERF domain-containing transcription factor6113e-061
A8MRC0 Uncharacterized protein At1g53910.36087e-061
C6K6J7 Ethylene signal transcription factor5925e-059
D6MKN8 Transcription factor (Fragment)5891e-058

Arabidopsis top hits (Blast detail)Scoree value
AT1G53910.1 RAP2.12; DNA binding / transcription factor12958e-143
AT1G53910.2 RAP2.12; DNA binding / transcription factor12958e-143
AT1G53910.3 RAP2.12; DNA binding / transcription factor6093e-063
AT3G14230.2 RAP2.2; DNA binding / transcription factor5091e-051
AT3G14230.3 RAP2.2; DNA binding / transcription factor4014e-039

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  22%
 
211  11%
 
201  11%
 
112  22%
 
122  22%
 
101  11%

Unigene MembersMember information