 |
Information for unigene UN01056
| FASTA Sequence |
| Unigene ID: UN01056 | Length: 681 |
SSR | | GGATAAAAAAGTTATTGCCTTGTCTGGCGCTGGCACATGGGTTTACAAATAATATATCACATAATCGTATCAGACACGACACCATT
TCCCATAAGAAAAAAAAATAGAAAGATTAAATAAATAATAATATATATCTCCATCAAGCAAAAAAAAAATAGAAGAGATATACAAA
GGTGGTTGCAAGAAGGTAGCAGCAGCAGCAGCAGGTACAGTTTACAAAGGAACCAAAGGACCCCCTTACGATGTAGTAGTGTCCCA
AGTTGTTGTTGGTGTCTTGGAACTCCACTCTGTTCTTCCTCTGACCACTTCGGCTCCATCCTGGAGTCGAAGTAAATGCTGACACT
CCACTTCCCCGCCTGTCTCGAGGTTACCGACATCACATCCAGAAACCGCGGTGAGAGACTGAAGCACACTGTCTCTTCCGCACTCC
CTCCGATACTCCAGAGTCATGCTTTTCAGTTTCTGACTCTCCAACATCCCTGCTGGAGCACTCTCCAGTATCCACCCAATGTACTT
TACATTGTTAACATGCTGGTTAACATCCAAGTCACTCCACCTCGGAGTGAGACCAGAACGAACATAGTCAGCGGTCTTGTCATCAA
GTTTGGTTAACTTTCTGCTGTCTTCAGCAATGACAGGATCAGAGTTCACAAAATAAGGCTCTATTTCCCCGCGAACCTC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACR56795 stearoyl ACP thioesterase [Brassica juncea] | 731 | 2e-075 |
| ACR56793 stearoyl ACP thioesterase [Brassica juncea] | 729 | 4e-075 |
| ACR56794 stearoyl ACP thioesterase [Brassica juncea] | 727 | 6e-075 |
| ABI18986 palmitoyl-ACP thioesterase [Brassica juncea] | 725 | 1e-074 |
| ACR56792 stearoyl ACP thioesterase [Brassica juncea] | 725 | 1e-074 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SQI3 Myristoyl-acyl carrier protein thioesterase, chloroplastic | 531 | 2e-053 |
| Q39513 Myristoyl-acyl carrier protein thioesterase, chloroplastic | 469 | 2e-046 |
| Q41635 Lauroyl-acyl carrier protein thioesterase, chloroplastic | 406 | 5e-039 |
| Q39473 Myristoyl-acyl carrier protein thioesterase, chloroplastic | 402 | 1e-038 |
| Q42712 Oleoyl-acyl carrier protein thioesterase, chloroplastic (Fragment) | 221 | 1e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D6BND6 Stearoyl ACP thioesterase | 731 | 1e-075 |
| D6BND4 Stearoyl ACP thioesterase | 729 | 2e-075 |
| D6BND5 Stearoyl ACP thioesterase | 727 | 4e-075 |
| D6BND3 Stearoyl ACP thioesterase | 725 | 7e-075 |
| Q0GLI8 Palmitoyl-ACP thioesterase | 725 | 7e-075 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G08510.1 FATB (fatty acyl-ACP thioesterases B); acyl carrier/ acyl-[acyl-carrier-protein] hydrolase | 714 | 9e-076 |
| AT3G25110.1 AtFaTA (Arabidopsis FatA acyl-ACP thioesterase); acyl carrier/ acyl-[acyl-carrier-protein] hydrolase | 251 | 4e-022 |
| AT4G13050.1 acyl-(acyl carrier protein) thioesterase, putative / acyl-ACP thioesterase, putative / oleoyl-(acyl-carrier protein) hydrolase, putative / S-acyl fatty acid synthase thioesterase, putative | 218 | 3e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
