Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN05089

FASTA Sequence
Unigene ID: UN05089Length: 1124  SNP
GGAGGCATTGAGATTTCAAGAAAAATAAGGGTGATAAAAATAAACACCCGAAAAATGGGTCTCAAGGCTTCCTCTTCTCTCCTCTG
TCTCACCATCTTATTAGGTGTTTCTTCCATTGTATCAGCGGTTAACATAACCCGAGCACTCGAGAAATACCCTGAATTCAGCACCA
TGATCGAGCTTTTCGCCAAGACCGAGCTTACACCAATTATCAACAAACGTCAGACAATTACCGTGCTGGCTCTTAGCAACGATGCT
ATCGGTTCCATTTCTGGTAGACCCGAGGAGGAGCTCAAGAACGTTCTTATGAATCATGTAGTTCTTGACTACTTTGATGAACTCAA
GCTCAAGGCACTCAAGGACAGGAGCACATTGCTCACTACCCTTTACCAATCTACCGGTTTGGGCCAGCAGCAAAACGGTTTCCTCA
ACTGCACCAAAACTAACGGAAAGATTTACTTTGGGTCTGGTGTGAAAGGCGCTCCTCAAACCGCTGAATACATCACAACCGTGTTC
CGCAACCCGTACAATCTCTCTGTGATCCAAATCAGCATGCCCATTGTGGCTCCTGGACTCGGATCTCCTGTTAACGTTCCTCCACC
ACCACCCATGTCATCACCACCGACTCCATCTCCCAAGAAGGCTGCAACCACTCCAGCTCCTGGACCATCTGAGGAGGAGGATTACG
CAGATTCTCCTCCTGGTGCAGCTCCAGAAGCCGCACCTGCATCAGCCCCATCAGAAGATGGTTCTCCTGCTCCGGCTCCTGGGAAT
GCTGGTAAGAAGAAAATGGCAGCAGCTGATGAAGTTGAACCACCTACTTCTGCTTCTAACACCGGTTTGAGTTTTGGTGCTGTTCT
GGTTCTCGGGTTTTTGGTTAGTTTTGTTGGGTTCTAAAATGGTTTAAGACAGAACAGAGTCGAGGACAGTAAACTGAATATGAGAC
TAGATCATGGTGATATGAAGTGGATCAATACTTAACAATTTCTACTCACATTACTAAAACTCAAATTGCTTTATCATTAGTGAATG
AAAATATGATGTTCAACAATGTGAAACTTGTACTGAGATATTGTAACTTATGTGTTTATATTCATTCATCAATTGAACGTGTTACA
TATTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880584 hypothetical protein ARALYDRAFT_481301 [Arabidopsis lyrata subsp. lyrata]13014e-141
NP_180021 fasciclin-like arabinogalactan protein 3 [Arabidopsis thaliana]12835e-139
NP_194865 FASCICLIN-like arabinogalactan protein 5 precursor [Arabidopsis thaliana]7801e-080
XP_002867304 hypothetical protein ARALYDRAFT_491605 [Arabidopsis lyrata subsp. lyrata]7711e-079
ABV27488 fasciclin-like arabinogalactan protein 17 [Gossypium hirsutum]5748e-057

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZQ23 Fasciclin-like arabinogalactan protein 312832e-140
O49586 Fasciclin-like arabinogalactan protein 57805e-082
Q9LTW9 Fasciclin-like arabinogalactan protein 144023e-038
Q9LZX4 Fasciclin-like arabinogalactan protein 103201e-028
O22126 Fasciclin-like arabinogalactan protein 83047e-027

TrEMBL top hits (Blast detail)Scoree value
A9XTM2 Fasciclin-like arabinogalactan protein 175791e-057
B9SPQ1 Putative uncharacterized protein5172e-050
B9NA05 Predicted protein5021e-048
A5BYV9 Putative uncharacterized protein4724e-045
B4F7Y8 Putative uncharacterized protein4482e-042

Arabidopsis top hits (Blast detail)Scoree value
AT2G24450.1 FLA3 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 PRECURSOR)12841e-141
AT4G31370.1 FLA5 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 PRECURSOR)7868e-084
AT3G12660.1 FLA14 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 PRECURSOR)4023e-039
AT3G60900.1 FLA103209e-030
AT2G45470.1 FLA8 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8)3046e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  17%
 
76  26%
 
107  30%
 
111  4%
 
83  13%
 
122  9%

Unigene MembersMember information