 |
Information for unigene UN08304
| FASTA Sequence |
| Unigene ID: UN08304 | Length: 1800 |
SSR | | GTTTATAAAATTAGGCAAATATGGAACGAACTAAAATACAACATTCCGTACACAGATTGACAAACAAAATCTGGATTCTCAACACC
TCAATTGACCAATATGAGTTGACAAAAAAAACAATGACCAACATGAGTTGACAAAAAAAAACAATGACCAATAAGAACAAAAAGCT
GAAAGAAACATAAAACGCCAGAGCAAAAGCTCAAACTTGTGAACCAAGAAGCTGCAAAGAAGAAGATGGTGGCGATCTAACAGATG
GAGCAGAGGATCTAAAGGGTCTGACGAAATCAAGGCTTGAAGGCAGAGAAAGCGACGACTGAGTTATGTCCACCGAAACCAAACGA
GTTTGATATGGCAACATTCACCTCATGCTGCTTCTTCTCGTTTGCGACCGTATCAAAGTCCACCGCTGGTTCTGGGTTAAATTGGT
TGATAGAGGGATGAAGCCATCCAGTGTTGATAGCCTTCACGGTGGCGATGGCTTCAAGACCTCCAGCTGCACCGAGGCAGTGACCT
ATCATAGACTTGGTGGCATTGATTTTGATCCCTGATGTGCTCTTGAATACCTTTTTAATGGCATTAATCTCAGCAAGATCACCAGC
CAGAGTGGAAGTTGCATGCGCATTGATGTAATTTACCTCCTCAGGTGATACACCAGCATCTTCAAGGCAGCTCTCAATGCATGAAG
AGACACCAAGGCCATCAGCTCTTGGATCAGTCATATGATGAGCATCACAATTAACAGCACCTCCAAGATACTCTGCTACAATTGGA
GCACCACGCTTCATCGCATGCTCCAAACTTTCCATCACCAGAACACCAGCTCCTTCACCCATGACAAACCCATCTCTCTGTTTATC
CCATGGCCTTGAAGCGGTTTGAGGGTCATCATTTCTCTGTGACAAAGCCCTACAAGCAACAAAACCTCCCAAACCAATAGGAATAA
TAGCAGCCTCAGTTCCACCAGCAATCATCATATCAGCTTCACCACGTCGAATGTGGTTCGCAGCCGCGTAAAAGCAGTAGTTAGAA
GTGGCACAAGCGGTCGAAATCGAGTAGTTAGGACCCATAAGACCGAGATCAATCGCCAACAAAGCAGAACCCATGTTTGTTATAGC
ATAAGGAATAAAGAAAGGAGAAATCCTCCTGTGACCTTTCTCAATAAGAGCTTGAACTCCGTCTGAAAACACAGTCAAACCACCCA
TACCAGTCCCAACTAGTACTCCAGCTTTCTGCTTATCAATCGTGTTAAGCTTATCACCACCAAGACCAGCACTTTCAAGAGCCTTC
TTGCCCGCAACAATGCAGTACTTCAAGCAATCATCAAGCCTACGCTCGTTCTTCCCATCGATGTAACCCTCAGAGCTAAACCCACG
GATCTGACCACCGAATCGAGTGGGGAACTTGGAGGCATCGAATCGATCAATCAAGCTGATTCCACTCTCGCCGGAGAGCAGCTTCT
CGTAGTAAGCGTCGACGTCGTTTCCGAAGACGGAGACGAGACCCATTCCGGTGATTACGACCCGTTTCTTCGGGTCTGTCTCGCGT
TTGGGGGCGGATGACGCGGAGATGAATGAGCGTCTTCTCGTGGGTTGTCTCGCATTGGTGATGTGGTGAGGAGATTGGCGATTTGA
GGGTCTTAGGAGTGGGTTTGGTGGAGAAGCGCGGAGGGATGAAGGGTGAAGAGCTTGCATGGCGGATCGAGAGAGAGAGAGAGAGA
GAGCGAGAGGGAGGCGATAAGTACGATGTTTTGTGTGAAATGATGAGGAGTGTTTGTGGAAAGAGGTTCTGGAGTTTCCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_199441 3-oxoacyl-[acyl-carrier-protein] synthase I [Arabidopsis thaliana] | 2271 | 3e-253 |
| XP_002863412 kas I [Arabidopsis lyrata subsp. lyrata] | 2262 | 3e-252 |
| AAC49118 3-ketoacyl-acyl carrier protein synthase I [Arabidopsis thaliana] | 2251 | 5e-251 |
| AAC04691 beta-ketoacyl-ACP synthase I [Perilla frutescens] | 2110 | 1e-234 |
| ACJ07140 beta-ketoacyl-ACP synthase I-1 [Arachis hypogaea] | 2077 | 8e-231 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P52410 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic | 2271 | 1e-254 |
| P23902 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic | 1905 | 3e-212 |
| Q9KQH9 3-oxoacyl-[acyl-carrier-protein] synthase 2 | 974 | 3e-104 |
| P73283 3-oxoacyl-[acyl-carrier-protein] synthase 2 | 963 | 5e-103 |
| Q83E37 3-oxoacyl-[acyl-carrier-protein] synthase 2 | 950 | 2e-101 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O48942 Beta-ketoacyl-ACP synthase I | 2110 | 8e-235 |
| B9H3Z7 Predicted protein | 2075 | 9e-231 |
| Q9M508 Beta-ketoacyl-ACP synthetase I | 2075 | 9e-231 |
| Q000L3 Beta-ketoacyl-ACP synthase I | 2068 | 6e-230 |
| Q41135 50 kDa ketoavyl-ACP synthase | 2061 | 4e-229 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G46290.1 KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); catalytic/ fatty-acid synthase/ transferase, transferring acyl groups other than amino-acyl groups | 2272 | 7e-256 |
| AT1G74960.2 FAB1 (FATTY ACID BIOSYNTHESIS 1); 3-oxoacyl-[acyl-carrier-protein] synthase/ fatty-acid synthase | 1288 | 9e-142 |
| AT1G74960.1 FAB1 (FATTY ACID BIOSYNTHESIS 1); 3-oxoacyl-[acyl-carrier-protein] synthase/ fatty-acid synthase | 1288 | 9e-142 |
| AT5G46290.2 KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); catalytic/ fatty-acid synthase | 1124 | 9e-123 |
| AT2G04540.1 3-oxoacyl-(acyl-carrier-protein) synthase II, putative | 672 | 2e-070 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
