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Information for unigene UN09426
FASTA Sequence |
Unigene ID: UN09426 | Length: 1314 |
SSR | SNP | TCATCTCATCTCAATTCTCACCATAGATCCAAACCTCCCAACCTTTTTTTCTTCCCGGAAATCACAAGAAAGAACAATCACGATCT
TCTATCTCCCCGGAAGAAGAAAAACAAACATGTGTAGTAAGATGGCGTTTACTCTGACAATCCCTCGATTTCACTCTCCAATTTCT
CGCAAACCCACCACCACCACCACTTGTTCATCTCCTCCTTCGAGGACACAGTCTGCTCACTTCAGCCATGAACGGTCCATTTCTCT
CAGACGAAGACTTTTCTTATTACCCGTCAAAGCCACTACCGATCAGTCAGGTCAGGTGGGTGGGGAAGAAGTTGACAGCAAGATCT
TACCTTACTGTAGCATCAACAAGAACGAGAAGAGATCAATCGGTGAAATGGAGCAAGAGTTTCTCCAAGCGATGCAATCATTCTAT
TACGAAGGCAAGGCTGTTATGTCTAACGAAGAGTTTGATAACCTTAAAGAAGAGTTGATGTGGGAAGGAAGCAGTGTTGTCATGCT
AAGTTCCGATGAACAAAGATTCCTTGAAGCTTCAATGGCTTATGTGTCTGGCAATCCAATCATGACTGATGAAGAATACGACAAGC
TGAAAATGAAACTAAAGATGGATGGAAGTGAGATTGTGTGTGAGGGTCCAAGATGCAGTCTTCGTAGTAAAAAGGTTTACAGTGAT
CTTGCAGTAGATTATTTCAAAATGTTCCTGTTGAATGTACCAGCAACCGTTGTTGCTCTCGGACTGTTTTTCTTCCTTGATGACCT
TACTGGTTTTGAAATCACTTACTTGCTCGAGCTTCCGGAACCATTCAGTTTCATCTTCACATGGTTTGCTGCGGTGCCTGCAATTG
TGTATCTGGCGCTATCACTCACCAAGCTGATCATCAGAGACTCCTTGATCTTGAAGGGCCCTTGTCCAAATTGTGGAACAGAGAAT
ACATCTTTCTTTGGAACAATTCTATCCATCTCCAATGATGGTTCCACCAACAATGTTAAATGCTCCGGATGTGGAACGGCGATGGT
CTATGACTCAAGTACTCGTTTGATCACATTACCAGAAGGAGGCAATGCTTAAACCCTATGGGCCAAGGTTTCGTTTCTCAGGGAGA
TGTATGTAAATTTGATACTAATAGATGAAGGAGGTGGAAAAATTAAGCAAAAGGGTTGTTTTGTGTGCTTCTATAATCTCTAGATG
TTTCCGTGTAGCTCTCGTTGACTTGTATTGTGTGTTGTAAGTAGATGTGAGGTGAAATCAGAGAAAGAACACCATGTGATTACTTC
TTTGGGGAATTTCGCTCTCACTAG
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GenBank top hits (Blast detail) | Score | e value |
NP_192933 PGR5-like protein 1B [Arabidopsis thaliana] | 1413 | 5e-154 |
XP_002874736 hypothetical protein ARALYDRAFT_490014 [Arabidopsis lyrata subsp. lyrata] | 1394 | 8e-152 |
NP_567672 PGR5-like protein 1A [Arabidopsis thaliana] | 1352 | 6e-147 |
XP_002869800 hypothetical protein ARALYDRAFT_492575 [Arabidopsis lyrata subsp. lyrata] | 1336 | 4e-145 |
NP_001078432 PGR5-like protein 1A [Arabidopsis thaliana] | 1334 | 8e-145 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q8GYC7 PGR5-like protein 1B, chloroplastic | 1413 | 2e-155 |
Q8H112 PGR5-like protein 1A, chloroplastic | 1352 | 3e-148 |
TrEMBL top hits (Blast detail) | Score | e value |
B9RBZ1 Putative uncharacterized protein | 1236 | 1e-133 |
C6TJX7 Putative uncharacterized protein | 1204 | 6e-130 |
A9PGK5 Putative uncharacterized protein | 1176 | 1e-126 |
B9GW41 Predicted protein | 1171 | 4e-126 |
B9GKR5 Predicted protein | 1169 | 7e-126 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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