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Information for unigene UN09443
| FASTA Sequence |
| Unigene ID: UN09443 | Length: 546 |
| SNP | GGATCTCTGGAAACTAGGGTTCTTGCTTCTTCGCTTGCCGCCGCTAAGCTCTCACCTTCGTCTACAGAATGGATTCTCAGATTAAG
CATGCCGTGGTGGTGAAAGTGATGGGACGTACGGGGTCAAGGGGTCAGGTGACTCAGGTTCGAGTGAAGTTCACAGACTCTGATCG
TTTCATCATGCGCAATGTTAAAGGACCAGTGAGGGAAGGTGACATCCTCACATTGCTCGAGTCCGAGAGAGAAGCCAGGAGACTTC
GTTGAGATCCCCCTTCCTCCTACACGGGTGGAAGCAAGAACACAGAACCAAATGTCTGCTTAGTTCTCTTTTTTTTTTTTTTTTTT
GCTTCTTGTTACTGGATTAGTGATTATGCACTCAGGTTCTGTTTGGTTGTTGCTATAAGACAATTCCTGGATTGATATTTGTTCTG
TCTTTTTTTCTGGTGTTCGGAGTTTTATGTGAAACTCATATCATCTTCACATCGAGAATTCATTACCCGAGTAAGCCATGGTCAGT
GTTATTACATAAAAGAATTGAACCAGGCCT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_201219 40S ribosomal protein S28-2 [Arabidopsis thaliana] | 314 | 3e-027 |
| NP_187620 40S ribosomal protein S28-1 [Arabidopsis thaliana] | 312 | 4e-027 |
| XP_002311925 predicted protein [Populus trichocarpa] | 287 | 4e-024 |
| XP_002520788 ribosomal protein S28, putative [Ricinus communis] | 287 | 4e-024 |
| XP_002322747 predicted protein [Populus trichocarpa] | 283 | 1e-023 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P34789 40S ribosomal protein S28-2 | 314 | 1e-028 |
| Q9SR73 40S ribosomal protein S28-1 | 312 | 2e-028 |
| P46302 40S ribosomal protein S28 | 259 | 3e-022 |
| Q6PBK3 40S ribosomal protein S28 | 221 | 9e-018 |
| Q90YP3 40S ribosomal protein S28 | 221 | 9e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9P8N1 Predicted protein | 287 | 3e-024 |
| B9S469 Ribosomal protein S28, putative | 287 | 3e-024 |
| A9P8H3 Predicted protein | 283 | 7e-024 |
| Q9ZNS5 Ribosomal protein S28 | 281 | 1e-023 |
| Q9ZRW5 Ribosomal protein S28 | 281 | 1e-023 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G64140.1 RPS28 (RIBOSOMAL PROTEIN S28); structural constituent of ribosome | 315 | 1e-029 |
| AT3G10090.1 40S ribosomal protein S28 (RPS28A) | 313 | 2e-029 |
| AT5G03850.1 40S ribosomal protein S28 (RPS28B) | 313 | 2e-029 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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