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Information for unigene UN09505

FASTA Sequence
Unigene ID: UN09505Length: 1343  SNP
GCTCAAGATCGGCTACATAGAGCCTTTTATATAAATGAAAAAATGGCAGTACGCCAGAATCAAAGAAACTTGGTAAATACGACTTG
CTTAAATGTAGTAATATGTAAAGAGCTATTGTGCTAAAAGAAGACCGTTATTGCTTGCAGTAGTGAGTGTCACAGAAACATGCTTG
AAACAAACCAGAACATTCTAAAAATTGTGAAAATGTTTTATTTTGATAAATGCAACAATCCCCCAGATGGCTTCTCTCCCTTTTCA
ATTGGCTTTTGACTCTATTACCTTCTTGGCGAAAGAAGGCAAACAGAACGCAGCTGAATGAATCTCAGCGTTGTAAAACTTTAAGG
GTCCCTTTGATTTGCTGGAGCTGTCATCAATCGGGTTCACAGGGTTCTTGAAGTCAACGTCAGGCCCTTCAGTTGAACAGAGCATG
AATCCGATCACCCCACTCGGGTATGTTGGAACACTGGTCCATGCGTAGTTCACAGAGCCCTTGAAGATCTCACGGCAATTGGAAAC
AATGTCTTCGATGATGTCCATGTGAAGCCACAAGCTTTCAGCCTGAGTGCACACAACTCCACCAGGTCGAAGAGCTCTCGCCACAG
ATTGGAAGAAGGGTTTCTCAAACAACTCCTTTGCAGGACCAATTGGATCTGATGAGTCAACAATAACTGCATCATATGTTCCTTCA
GCAGCATTCTTCAAAAAAGCAACACCATCGCCAATGACGAGGTTAACGCGAGGATCCTCGAATCCAATTGCTACATTAGGGAAAAA
CTGCTTAGAGACATCGACCACCATTTTATCAATTTCACACATGTCAATCTGCTCAACAGAAGCATGGCGTGCAACTTCACGCAAGA
CACCTCCATCTCCTCCTCCAATGACCAACACCTTCTTAGGGTTAGGGATAGAGCACAAAGGAAGATGAGTGATCATCTCCTGATAA
GCGCACTCGTCTCTCTCCGTGAGTTGGATGACTCCATCCAAAACCAACACTTTTCCATATGTCGCAGACTGGAAAACAATGACATC
CTGATAATCTGATTTCCCTTGAAACAAAACCTTCTCAACCTTCAAAGAGTGTGCCTCTCCTGGCCACATGGGACTCATCTCAGAGA
ACCATCCAGGAATCACGGAGGAGAAACAAGCAGGCTCCTTTGTCTGATCTCCGTTCTCTGTCTCCATGGAGGCGGCGGCGTTATCC
TCCTCTTCTCTCGGGCGCTTCAGATCGGTGGCGGAGGCTTCTTTGGCATCCATCGCTGCTCTGTTCGGCGAAGAAGAAGAGGAGGA
GATACGAGAGAGGGTGAAATGAGAGAGAGGGATTAGGGTTTTGCAGGGGAGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890597 hypothetical protein ARALYDRAFT_889925 [Arabidopsis lyrata subsp. lyrata]17074e-188
NP_173794 spermidine synthase 1 [Arabidopsis thaliana]16852e-185
Q9ZUB3 RecName: Full=Spermidine synthase 1; Short=SPDSY 1; AltName: Full=Putrescine aminopropyltransferase 116762e-184
1XJ5 Chain A, X-Ray Structure Of Spermidine Synthase From Arabidopsis Thaliana Gene At1g2382016232e-178
CAO02391 spermidine synthase [Cochlearia officinalis]16143e-177

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZUB3 Spermidine synthase 116767e-186
O48661 Spermidine synthase 215209e-168
O48659 Spermidine synthase 214033e-154
Q96556 Spermidine synthase 114016e-154
Q9SMB1 Spermidine synthase 113918e-153

TrEMBL top hits (Blast detail)Scoree value
A7DY57 Spermidine synthase16142e-177
Q5PNT7 At1g7031015201e-166
Q8GTQ5 Spermidine synthase14116e-154
B9HVB2 Predicted protein14035e-153
B9T7V2 Spermidine synthase 1, putative14027e-153

Arabidopsis top hits (Blast detail)Scoree value
AT1G23820.1 SPDS1 (spermidine synthase 1); spermidine synthase16864e-188
AT1G70310.1 SPDS2 (spermidine synthase 2); spermidine synthase15216e-169
AT1G23820.2 SPDS1 (spermidine synthase 1); spermidine synthase13721e-151
AT5G53120.1 SPDS3 (SPERMIDINE SYNTHASE 3); spermidine synthase/ spermine synthase10914e-119
AT5G53120.2 SPDS3 (SPERMIDINE SYNTHASE 3); spermidine synthase/ spermine synthase10914e-119

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
95  24%
 
113  14%
 
62  10%
 
82  10%
 
103  14%
 
203  14%
 
213  14%

Unigene MembersMember information