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Information for unigene UN09800
| FASTA Sequence |
| Unigene ID: UN09800 | Length: 774 |
SSR | SNP | GGAAGGAAGTTAAGAGAAAAGAAGAAAAGAAGAAGAAGAAGTAGTAATGGCTTCCTCTATGCTTTCCTCCGCTGCTGTTGTTACCT
CACCCGCTCAAGCCACCATGGTCGCTCCATTCACCGGCTTGAAGTCATCCGCTGCATTCCCAGTCACCCGCAAAGCAAACAACGAC
ATTACTTCCATTGCAAGCAACGGAGGAAGAGTTAGCTGCATGAAGGTGTGGCCGCCAATTGGAAAGAAGAAGTTTGAGACCCTCTC
TTACCTTCCTGACCTTTCCGATGTTGAGTTGGCTAAGGAAGTCGACTACCTTCTCCGCAACAAGTGGATTCCTTGTGTTGAATTCG
AGTTGGAGCACGGATTTGTGTACCGTGAGCACGGAAGCACACCCGGATACTATGATGGACGGTACTGGACAATGTGGAAACTTCCC
TTGTTCGGATGCACTGACTCTGCTCAAGTGTTGAAGGAAGTCCAAGAATGCAAAAAAGAGTACCCTAACGCCTTCATCAGGATCAT
CGGATTTGACAACAACCGTCAGGTTCAGTGCATCAGTTTCATCGCCTACAAACCACCAAGCTTCACCGATGCTTAATTTGCTATGT
CATTCACATAATAATAATCCCTGCTCATTTCATTTCCAATTCTGTTTTCGTTCCCCTTTGGATTTCTGTTTCTCAGACATTCTATA
TCGGATTGTCAAATGTCTGATTGTGAACATGTAATTTCTATATTGCTTCTTCGTCTTGGTTATCATCCCAGAGAAGTACCTAGATG
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002868776 ribulose bisphosphate carboxylase [Arabidopsis lyrata subsp. lyrata] | 955 | 3e-101 |
| XP_002868775 ribulose bisphosphate carboxylase small chain 1B [Arabidopsis lyrata subsp. lyrata] | 952 | 6e-101 |
| P27985 RecName: Full=Ribulose bisphosphate carboxylase small chain F1, chloroplastic; Short=RuBisCO small subunit F1; Flags: Precursor | 940 | 2e-099 |
| NP_198659 ribulose bisphosphate carboxylase small chain 1B [Arabidopsis thaliana] | 937 | 3e-099 |
| P08135 RecName: Full=Ribulose bisphosphate carboxylase small chain, chloroplastic; Short=RuBisCO small subunit; Flags: Precursor | 936 | 4e-099 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P27985 Ribulose bisphosphate carboxylase small chain F1, chloroplastic | 940 | 7e-101 |
| P10796 Ribulose bisphosphate carboxylase small chain 1B, chloroplastic | 937 | 2e-100 |
| P08135 Ribulose bisphosphate carboxylase small chain, chloroplastic | 936 | 2e-100 |
| P05346 Ribulose bisphosphate carboxylase small chain, chloroplastic | 933 | 5e-100 |
| P10798 Ribulose bisphosphate carboxylase small chain 3B, chloroplastic | 933 | 5e-100 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q306K0 Ribulose bisphosphate carboxylase small chain | 934 | 5e-099 |
| A1YN03 Ribulose bisphosphate carboxylase small chain | 921 | 2e-097 |
| Q43746 Ribulose bisphosphate carboxylase small chain | 910 | 3e-096 |
| Q0WVH4 Ribulose bisphosphate carboxylase small chain | 896 | 1e-094 |
| A1YMW8 Ribulose bisphosphate carboxylase small chain | 849 | 4e-089 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G38430.1 ribulose bisphosphate carboxylase small chain 1B / RuBisCO small subunit 1B (RBCS-1B) (ATS1B) | 938 | 1e-101 |
| AT5G38410.1 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) | 934 | 3e-101 |
| AT5G38420.1 ribulose bisphosphate carboxylase small chain 2B / RuBisCO small subunit 2B (RBCS-2B) (ATS2B) | 929 | 1e-100 |
| AT5G38410.3 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) | 918 | 2e-099 |
| AT1G67090.1 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate carboxylase | 896 | 8e-097 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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