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Information for unigene UN09944

FASTA Sequence
Unigene ID: UN09944Length: 992 SSRSNP
GGAGTTTAACAGCTATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAACTTTGAAAACAATTCGCCGCCTCTAGGACGAAGA
AGAAAATGGCCGGAGGAGGCGGATACGGCGGCGCATCGGGAAAAGTGGATTACGTGTTCAAGGTAGTTCTGATCGGAGATTCAGCA
GTTGGGAAATCACAGCTGCTAGCTCGATTCGCAAGAGACGAGTTCAGCTTGGACTCCAAAGCCACCATCGGTGTCGAGTTTCAGAC
TCGTACGCTCCTCATTGAAGAGAAGAGCGTCAAGGCTCAGATCTGGGATACCGCCGGCCAAGAAAGATACAGAGCGGTTACGAGCG
CATACTACAGAGGAGCAGTTGGTGCGATGCTTGTTTATGATATTACTAAGCGTGAGACCTTTGACCACATCCCTCGTTGGCTTGAA
GAATTGCGAGCTCATGCTGATAAGAACATTGTCATCATCCTCATTGGTAACAAGTCTGATCTCGAAGATCAGAGAGCGATTCCCAC
CGAAGACGCTAAAGAGTTTGCTGAGAAGGAAGGTCTTTTCTTCCTCGAGACCTCTGCTTTGAACGCAACCAATGTCGAAAACTCCT
TCAACACTCTCATGACAGAGATCTTCAACACTGTTAACAAGAAGAGTCTCTCATCTGCTGGTGAGTCGAATAACCCTGGTTCGTTG
GCTGGTAAGAAGATTGTCATCCCAGGTCCTGGACAGGAGGTTCCCGCTAAGACCAGCACGTGTTGTAGTTCTGCTTGATCTGTGTC
GTTTACAAAAGCAAAAATTCATTTGTCCCGTCTCCCCCTTTGAACTATGGTGATGATAGAGAATGCTTACTTTCATATTGTATATT
CTTTTTGGAATCTGGCTTGTGTTGCTTGCTTCCTTGGTTCATTAAACAATGGTGCAATTAGACACCGATAGAGAGTGTATTGGAGA
ACAAATAGCTTTTGATTTTGAATTGTTAAACAGCATCCTTCAGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195709 RAB GTPase homolog A4B [Arabidopsis thaliana]10764e-115
AAM66946 GTP-binding protein GB3 [Arabidopsis thaliana]10702e-114
XP_002866902 hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp. lyrata]10693e-114
AAA87884 ATGB3 [Arabidopsis thaliana]10675e-114
NP_201330 RAB GTPase homolog A4A [Arabidopsis thaliana]9582e-101

Swiss-Prot top hits (Blast detail)Scoree value
Q40191 Ras-related protein Rab11A9193e-098
Q40522 Ras-related protein Rab11D9103e-097
Q40520 Ras-related protein Rab11C9005e-096
P25766 Ras-related protein RGP18136e-086
O04486 Ras-related protein RABA2a6542e-067

TrEMBL top hits (Blast detail)Scoree value
Q9SMQ6 GTP-binding protein GB310763e-115
Q8L958 GTP-binding protein GB310701e-114
Q38923 ATGB310673e-114
Q9FJN8 GTP-binding protein9581e-101
B9HFE2 Predicted protein9562e-101

Arabidopsis top hits (Blast detail)Scoree value
AT4G39990.1 RABA4B (RAB GTPASE HOMOLOG A4B); GTP binding10771e-117
AT5G65270.1 AtRABA4a (Arabidopsis Rab GTPase homolog A4a); GTP binding9588e-104
AT3G12160.1 RABA4D (RAB GTPASE HOMOLOG A4D); GTP binding7607e-081
AT5G47960.1 ATRABA4C; GTP binding7599e-081
AT1G09630.1 ATRAB11C (ARABIDOPSIS RAB GTPASE 11C); GTP binding6585e-069

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  17%
 
102  11%
 
84  22%
 
62  11%
 
95  28%
 
121  6%
 
201  6%

Unigene MembersMember information