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Information for unigene UN10430

FASTA Sequence
Unigene ID: UN10430Length: 1157  SNP
GGACATCACAATTCGCTTGTGAATCAAATCTTAGTAATAACATAGCTAGCTAGTATCAAGAAAATGGATTTTTTCCACAAAGCTAA
ATCCGTTAGGATGCGTAACGTCCATGAGAAGTATCTAACGGCGGACGAGGACGAAGAGACGGTGACTCAAGACAGGAATGGTTCCG
ACAAGAGAGCTCGATGGACCGTCGAACCAGTTCGTGGTTCCTTTGAAGTGATCCGTTTAAGGAGTTGTTACGGTAACTACCTCACC
GCTTCGAACGAGCGGTTCTTGCTCGGTGCCACGGGACTTAAAGTGGTCCTGTCGAAACCTAGTCGGCTTAACGCGTCCGTCGAGTG
GGAGCCGGTGAGAGAAGGATCCAAAATGAAGCTCAAGACTAGGCATGGTAACTTTCTACGAGCCAATGGTGGACTTCCTCCGTGGC
GTAACTCAGTCACTCATGACTCTCCTCATAGTTCGGACTCGTTCTTGTGGGATGTTGATATCGTTGAGATCTTGGTTGAAACGGCT
ACTCCAGCTCCAGCAGTGGCTACAACTCCTCCGCTACATAGGAGGCCGTCGAGCCCCCCACCACATAGGAGGCCATCGAGTCCTTC
TCCGCCACATAGGATCCCGTCAAAACCTCCGGTGTCTAGGAGTTCTTCAGAAACATCCGAGGAAAATTTGACTGAGTCGCCGCCGA
AATCTGAAGGAAGGATCATATATTACCACATCGCAGACGAAGAGGGTCACGTGGAGGATGAGTCGGCCGTTGGATACGCTTTAACT
TTCAAAGGAAACAGCGTGGAGCAGTTGACGCAGGCGCTGAAGGAAGAGACTAGCATGGATGATGTCGTCGTGTGTACACGCAATCC
TTTAAACGGCAAGCTGTTTCCTCTTCGTTTGCAGCTTCCGCCAAATAGCGGAACAATGCATGTCGTTCTCGTACCCTCAAATACTT
TTTAAATGGCGTGCTATGTGTGTTCTGCAATATTGGTCGAAGTGTTGAGAAATATGGTGTTGACCAAAATGTAAACGATTGGTCCC
CCGTTCCATTAGATACGAGTATGCAGATAGGTCATTACTGTGGGTGCTAATCTTTCATTTTTTTGTTATTTTGTAAACGAATCACT
TAAGTTTAGCCATTTTATATGTGAACATCCGCGATAATA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_174030 Actin cross-linking protein [Arabidopsis thaliana]10604e-113
BAD94732 hypothetical protein [Arabidopsis thaliana]10542e-112
XP_002890618 hypothetical protein ARALYDRAFT_472692 [Arabidopsis lyrata subsp. lyrata]10246e-109
ABK94560 unknown [Populus trichocarpa]8695e-091
XP_002311873 predicted protein [Populus trichocarpa]8695e-091

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q0WQH3 At1g2710010603e-113
Q56WL0 Putative uncharacterized protein At1g2710010541e-112
A9PDV7 Putative uncharacterized protein8694e-091
B9HMU6 Predicted protein8694e-091
B9S2E3 Putative uncharacterized protein8462e-088

Arabidopsis top hits (Blast detail)Scoree value
AT1G27100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin_cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69900.1); Has 184 Blast hits to 118 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 8; Plants - 166; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).10601e-115
AT1G59710.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin_cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27100.1); Has 119 Blast hits to 107 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 119; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).8324e-089
AT1G69890.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin_cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27100.1); Has 121 Blast hits to 109 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).7868e-084
AT3G28630.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin_cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G59710.1); Has 121 Blast hits to 110 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).7536e-080
AT3G28630.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin_cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G59710.1); Has 120 Blast hits to 109 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 116; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).7527e-080

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  40%
 
71  10%
 
212  20%
 
201  10%
 
182  20%

Unigene MembersMember information