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Information for unigene UN10556

FASTA Sequence
Unigene ID: UN10556Length: 1346 SSR 
GGACAAAAAAATATGTTCTCATCTATTTAGTACTTACTTGACTTCTGACCTCTGTCTACCAGTAATAACGAGACCGTCTCTGCCTC
TCTCTCTCTCTCCTTTAAAAAAATAATGGACAGTGTAGCACTTTTCTTCACCGGAGCTCTCGTAGCCGGCGGTATCTACTGGTTCC
TCTGCGTACTCGGACCAGCTGAGCGTAAAGGCAAACGAGCGTTGGATCTATCCGGCGGCTCCATCTCCGCCGAGAAAGTTCAAGAC
AACTACAAACAGTACTGGTCTTTCTTCCGCCGTCCCAAAGAGATCGAAACCGCCGAGAAAGTCCCAGACTTCGTGGACACGTTCTA
CAACCTCGTCACCGACATCTACGAGTGGGGATGGGGACAGTCCTTCCACTTCTCCCCTTCCATCCGTGGCAAATCCCACCGTGACG
CCACGCGCCTCCACGAAGAGATGGCCGTAGATCTGATCCAAGTTAAACCTGGCCAAAAGATCCTCGACGTCGGATGCGGCGTCGGA
GGTCCGATGCGCGCGATTGCATCTCACTCGCGAGCCAACGTTGTCGGAATTACAATCAACGAGTATCAGGTTAAGAGAGCGCGTGA
CCACAACAGGAAAGCGGGACTCGACGCGCTCTGCGAGGTCGTGTGCGGCAACTTCCTCCAGATGCCGTTCGATGACAACACTTTCG
ACGGCGCGTACTCGATCGAAGCCACGTGTCACGCGCCAAAGCTCGAAGAAGTCTACGCGGAGATCTACAGAGTGTTGAAGCCCGGA
TCTCTCTACGTGTCGTACGAGTGGGTCACGACCGATAAGTTCAACGCGGAGGATGAGGAACACGTGGAGGTCATCCAAGGGATCGA
GAGAGGAGACGCGCTTCCTGGGCTTAGGGCTTATTCCGACATAGCCGAGGCGGCGAAGAAGGTTGGGTTCGAAGTTGTCAAGGAGA
AGGATCTGGCGGCTCCGCCGGCTGAGCCGTGGTGGACTAGGCTTAAGATGGGTCGGCTAGCTTACTGGAGGAACCACATTGTGGTC
CAGGTTTTGTCTGCTGTCGGAGTTGCGCCTAAAGGAACCGTTGATGTTCACGAGATGTTGTTTAAGACCGCTGATTTCTTGTCCAG
AGGAGGCGAAACTGAAATTTTCTCTCCGATGCATATGATTTTCTGCCGGAAACCTATTTCTTAATAGGAGAATCTGTCGATCTCAG
TTTGTTTTTAATTTTTGTTTTTTTAGTGGCTTTTTAATCATGCTTGGTCAGTCCTATGTACTCTTTTTAGATTTAAAACCGTGTTT
AGTCTTAATTTGGTATTACTGTTAAGTTTTTCCTGAATAAGTGAAACTTGGAATCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173458 24-methylenesterol C-methyltransferase 2 [Arabidopsis thaliana]17845e-197
AAM91592 24-sterol C-methyltransferase [Arabidopsis thaliana]17811e-196
XP_002893098 hypothetical protein ARALYDRAFT_472261 [Arabidopsis lyrata subsp. lyrata]17802e-196
CAA61966 sterol-C-methyltransferase [Arabidopsis thaliana]17792e-196
AAN31890 putative sterol-C-methyltransferase [Arabidopsis thaliana]17764e-196

Swiss-Prot top hits (Blast detail)Scoree value
Q39227 24-methylenesterol C-methyltransferase 217842e-198
Q94JS4 24-methylenesterol C-methyltransferase 316302e-180
O82427 24-methylenesterol C-methyltransferase 213675e-150
Q6ZIX2 Cycloartenol-C-24-methyltransferase 16041e-061
Q9LM02 Cycloartenol-C-24-methyltransferase6023e-061

TrEMBL top hits (Blast detail)Scoree value
B9R8F7 S-adenosyl-l-methionine:delta24-sterol-C-methyltransferase, putative16903e-186
D2D5G3 Sterol 24-C methyltransferase 2-116733e-184
B0FDL8 24-sterol C-methyltransferase16723e-184
A9P9Q4 Predicted protein16706e-184
B0FDL7 24-sterol C-methyltransferase16706e-184

Arabidopsis top hits (Blast detail)Scoree value
AT1G20330.1 SMT2 (STEROL METHYLTRANSFERASE 2); S-adenosylmethionine-dependent methyltransferase17842e-199
AT1G76090.1 SMT3 (STEROL METHYLTRANSFERASE 3); S-adenosylmethionine-dependent methyltransferase/ sterol 24-C-methyltransferase16301e-181
AT5G13710.1 SMT1 (STEROL METHYLTRANSFERASE 1); sterol 24-C-methyltransferase6022e-062
AT5G13710.2 SMT1 (STEROL METHYLTRANSFERASE 1); sterol 24-C-methyltransferase6022e-062
AT1G73600.2 methyltransferase/ phosphoethanolamine N-methyltransferase1855e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  11%
 
219  50%
 
193  17%
 
203  17%
 
71  6%

Unigene MembersMember information