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Information for unigene UN10597
| FASTA Sequence |
| Unigene ID: UN10597 | Length: 963 |
| SNP | GGGTACTTTAAAGTCTATCTCTTCTGCAACTCTTTAGGGTTTTATCCTCCAAAGTCGCAACCTTTTCTTATCCTCAAGAAATGGCG
GCGACGCAGCTTACATCGTCACCAGTGACTGTGTCAGCGAGGAGCTTAGCCTCACTGGAAGGTCTCCGTGCTGCTTCGACTGCAAA
GTTTTCATCTTTTGGAACTTTGAAAGCAGGGAACTTTAGGCAGAGTCACTTCCGTCCTTTGGTTGTTAAAGCTGCTTCTGTGGTTG
CTCCTAAGTACACATCGATTAAGCCATTGGGAGATAGAGTTTTGGTGAAGATCAAGGAGGCAGAGGAAAAGAGTATGGGAGGTATC
TTTCTTCCATCCACAGCTCAATCAAAACCTCAAGAAGGTGAAGTCGTTGCTGTGGGTGAAGGAAGAACTATTGGGAAGACCAAAAT
CGATATCACTGTCCCTACTGGAGCACAGATTATTTACTCAAAATACGCAGGAACTGAGGTGGAGTTTAACGATGTGAAACATCTCA
TTCTCAAGGAAGATGATATTGTTGGCCTTCTCGAGACAGATGACATCAAAGATCTCAAACCCTTGAATGACCGAGTCTTCATCAAG
GTTGCTGAGGCAGAGGAGAAAACAGCTGGAGGGTTGTTGCTAACCGAGACTACCAAAGAGAAGCCTTCTATTGGAACGGTTATAGC
GGTTGGACCAGGTTCTCTAGATGAGGAAGGTAAACTTCAGCCATTACCTATATCGACTGGAAGCACAGTTCTGTACTCCAAGTATG
CAGGCAATGACTTCAAGGGAAAAGATGGTTCCAACTACATCGCCCTCAGAGCTTCAGATGTTATGGCTATCCTTTCTTAGTTTTTT
TCTTTTTTCTTTGTAACCTGCAACTTGTATCCCAATTGTGGAAATTTTTTCATCAACGGCCTGAGCATAATCTTGAATAAAAAAGA
CTTGAGAGTTTTAAAGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197572 chaperonin 20 [Arabidopsis thaliana] | 1112 | 3e-119 |
| AAC14026 chaperonin 10 [Arabidopsis thaliana] | 1085 | 4e-116 |
| AAM77651 cp10-like protein [Gossypium hirsutum] | 1017 | 3e-108 |
| XP_002516232 groes chaperonin, putative [Ricinus communis] | 974 | 3e-103 |
| XP_002326137 predicted protein [Populus trichocarpa] | 969 | 1e-102 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O65282 20 kDa chaperonin, chloroplastic | 1112 | 1e-120 |
| Q02073 20 kDa chaperonin, chloroplastic | 791 | 2e-083 |
| P0A347 10 kDa chaperonin | 271 | 4e-023 |
| P0A348 10 kDa chaperonin | 271 | 4e-023 |
| Q37761 10 kDa chaperonin, cyanelle | 263 | 3e-022 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LK52 Cp10-like protein | 1017 | 2e-108 |
| B9RR63 Groes chaperonin, putative | 974 | 2e-103 |
| A9PIF1 Predicted protein | 969 | 7e-103 |
| A9PK25 Putative uncharacterized protein | 959 | 1e-101 |
| Q6B4V4 Chloroplast chaperonin 21 | 946 | 3e-100 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G20720.1 CPN20 (CHAPERONIN 20); calmodulin binding | 1131 | 7e-124 |
| AT5G20720.2 CPN20 (CHAPERONIN 20); calmodulin binding | 1131 | 7e-124 |
| AT1G14980.1 CPN10 (CHAPERONIN 10); chaperone binding | 143 | 2e-009 |
| AT1G23100.1 10 kDa chaperonin, putative | 130 | 8e-008 |
| AT3G60210.1 chloroplast chaperonin 10, putative | 121 | 9e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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