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Information for unigene UN10618
| FASTA Sequence |
| Unigene ID: UN10618 | Length: 1339 |
| SNP | GGGACAAACCCAAAGTTTCATTAGCATTAACCTCAGAATGAAAATGGGTAGTGCTAAATCAGCCATACTAATCTTCTTATTATCAG
TGGGCATCGCATCTTGCGCCATTGCCATGGACATGTCCGTCGTTTCCTACGATGACGATCACCAAGTAACCGCTGGTCCCGGCCGC
CGCAGCAGCGTTTTTGATTCCGAGGCATCGTTGATATTCGAGTCATGGATGGTCAAGCACGGGAAGGTGTACGAGTCCGTCGCCGA
GAAGGAACGGCGTTTAACGATTTTCGAGGACAACCTTCGTTTCATCACTAGCCGCAACGCTGAAAACTTTGGTTATCGGCTTGGTT
TGAACCGGTTTGCAGATTTGTCCCTCCATGAATACGGACACATTTGCCATGGGGCTGATCCTAGACCACCTAAGAACCATGTTTTC
ATGACTAGCAGCAACCGATACAAGACTAGTGCTGGTGATGTGCTTCCTAAGTCTGTTGACTGGAGGAAGGAAGGTGCAGTGACTGA
AGTCAAAGATCAAGGCCATTGCCAGAGTTGTTGGGCTTTCTCGACGGTGGGGGCAGTGGAAGGCTTAAACAAGATCGTGACAGGAG
AGTTAGTCACTTTGTCCGAGCAAGATTTGATCAACTGTAACAAAGAAAATAATGGTTGCGGAGGAGGTAAAGTCGAGACTGCCTAT
GAGTACATAGTCAACAATGGTTGTCTTGGTACAAACAGAGATTATCCTTATAAGGCTGTTAATGGAGTATGCCACGCCGGCCTCAA
GGAAAACAACAAGAATGTTATGATTGATGGGTATGAGAATTTGCCTTCCAACGACGAGCTTTCTCTAATGAAAGCGGTTGCTCACC
AGCCTGTAACAGCCATTATCGATTCAAGCAGCAGGGAATTTCAGCTTTATGAATCAGGTGTATTTGATGGAACGTGCGAAACAAAC
CTAAACCATGGAGTTGTTGTGGTTGGGTATGGAACCGACAACAGTCGTGACTATTGGATCGTGAGGAACTCATGGGGAAACACTTG
GGGAGAAGCTGGCTACATGAAGATGGCTCGCAACATTGCAAACCCAAGAGGATTATGTGGTATCGCGATGCGTGCTGCATACCCCC
TTAAGAACTCGGTTTCTAACGATATAAGGTCCATGGCCTAATAATTTGAACTAAATGTATGTGTTATGCGAGGGTTCGAGTGAGCG
AACAACCTATTCGACTTTGAAGCAAAAATAATGTTGTCAATGGGTTTTATTTTGTAATATATTTTGTAATTGTTGATTTGGAGTAT
TGTAATATTATGAATATTTCGTTTGGGAATAATATTTCCTCTTTCGAGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567377 putative cysteine proteinase [Arabidopsis thaliana] | 1706 | 6e-188 |
| XP_002872576 hypothetical protein ARALYDRAFT_489965 [Arabidopsis lyrata subsp. lyrata] | 1701 | 2e-187 |
| XP_002872575 hypothetical protein ARALYDRAFT_911472 [Arabidopsis lyrata subsp. lyrata] | 1665 | 3e-183 |
| NP_567376 putative cysteine proteinase [Arabidopsis thaliana] | 1591 | 1e-174 |
| BAJ33895 unnamed protein product [Thellungiella halophila] | 1591 | 1e-174 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SUS9 Probable cysteine proteinase At4g11320 | 1706 | 2e-189 |
| Q9SUT0 Probable cysteine proteinase At4g11310 | 1591 | 5e-176 |
| P43297 Cysteine proteinase RD21a | 1008 | 2e-108 |
| P25777 Oryzain beta chain | 900 | 7e-096 |
| Q9LT77 Probable cysteine proteinase At3g19400 | 855 | 1e-090 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FMH8 Cysteine protease component of protease-inhibitor complex | 1027 | 2e-109 |
| O81748 Cysteine proteinase-like protein | 991 | 3e-105 |
| Q84M29 Cysteine protease-1 | 966 | 3e-102 |
| A2PZE2 Cysteine proteinase | 946 | 5e-100 |
| C4IZ54 Putative uncharacterized protein | 916 | 2e-096 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G11320.1 cysteine proteinase, putative | 1707 | 2e-190 |
| AT4G11310.1 cysteine proteinase, putative | 1592 | 4e-177 |
| AT5G43060.1 cysteine proteinase, putative / thiol protease, putative | 1027 | 1e-111 |
| AT4G23520.1 cysteine proteinase, putative | 1016 | 2e-110 |
| AT1G47128.1 RD21 (responsive to dehydration 21); cysteine-type endopeptidase/ cysteine-type peptidase | 1008 | 2e-109 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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