Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN10622

FASTA Sequence
Unigene ID: UN10622Length: 1002  SNP
AACTTTGAAATACTATTTGCTAGAAATACTCTCTGCTCCAAATCGCCTTAATTAATTAACCATGGTGAAGAGCATCATTGTCATCG
TAGCTATCCTATGCCTCATCTCTCTACCAAATCCAACCGTGGGATCACAAAAGAAACCGTGGCCTATGCCGTCTGACCTAGCCAAC
CACAATGGAAAGTTTGGTGACTCTAAGATTTCTTGGGCTTGCTCCGAGGTCTCCGATCCAAATGCTCCTCCTTCACCTCCTGGCTC
ATTCCCCACTATCCCAAACATTCCAGGGATACCAAACATCCCACAGATTCCAGCGATACCAAACATCCCTCAAATCCCACAGATTC
CAGGGATACCAAACATCCCTATCCCACAGATCCCAGGAATACCGAACATCCCTATCCCACAGATTCCAGGGATACCAAACATTCCT
ATCCCACAGATCCCAAGTATACCGAACATCCCTAACCTTCCTGGTCTTGGAGGATCATTTAGCCCGTTCCAGTCTGTTCTCGTGTC
GCAGTCCGGTGAGTTAAAGAAGTGTTTGACTGGGGATAAGTCGAAGGTGTCAGAGAAATGTTTCTCGCAGGTGTTTTCCAGTTGGG
CAGAGAACGACTTGGCTTTGGACAAGGAGTGTTGTGAGATCGTTTTGAATATGGACAAGAAGTGCTATGGCCATCTCCACATGATG
TTCAAGAGCCATTTCTTTACTCCTCTCCTTCAGTACTCTTGTCACATCAAGCATGCCAAGAAGAACTAAGCTCGTCTCCTCCGTTT
TGGATTTTCTTTCATTTTCATTTAGTTTTCTGTTAGGGTTTGTTTTGTTTTGTCCATTTCTAATGGACATAACTTGATTAGTTCTT
TGTTTAATTAATAAAATAGTAGTTTTTAACTATTAAGTTTTATCTGCTAATTACATATTTATTTACATTTTTTTTTAATTCTATAT
GCTTGTGGATTTTCATCTATATGCCTATACAATCCGAAAACTAGTTTGCCATTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893986 hypothetical protein ARALYDRAFT_891389 [Arabidopsis lyrata subsp. lyrata]6572e-066
NP_001077678 ECA1 gametogenesis related family protein [Arabidopsis thaliana]5712e-056
AAK43480 hypothetical protein [Arabidopsis thaliana]5398e-053
NP_190626 hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana]5236e-051
XP_002877752 hypothetical protein ARALYDRAFT_485404 [Arabidopsis lyrata subsp. lyrata]5201e-050

Swiss-Prot top hits (Blast detail)Scoree value
P96213 ESX-1 secretion-associated protein EspE1666e-011
O76192 Seroin1228e-006

TrEMBL top hits (Blast detail)Scoree value
Q570Y0 Putative uncharacterized protein At1g442225711e-056
Q94LA3 Putative uncharacterized protein T18F15.115395e-053
Q9SCR8 At3g505705234e-051
Q22KQ6 Putative uncharacterized protein2108e-015
Q4JF57 Formin like protein2108e-015

Arabidopsis top hits (Blast detail)Scoree value
AT1G44224.1 Encodes a ECA1 gametogenesis related family protein6227e-065
AT3G50570.1 hydroxyproline-rich glycoprotein family protein5303e-054
AT3G02670.1 proline-rich family protein1522e-010
AT5G15780.1 pollen Ole e 1 allergen and extensin family protein1352e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
66  11%
 
919  33%
 
1011  19%
 
127  12%
 
82  4%
 
75  9%
 
116  11%
 
181  2%

Unigene MembersMember information