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Information for unigene UN11236
| FASTA Sequence |
| Unigene ID: UN11236 | Length: 787 |
| SNP | TTTGACTGAATATTCTCACAGATTAATTCGATTGGAACTTTTAGATCAATGCCATCCCACACTCACAAGGAGGCAGTTTTATTCAA
TCTACATTATTGCTATCACGCGTTGACAGACAATTTTATTCAATTTTGCATTATATATGAACGTTCATTATATATTGCCGTGTTAC
TTTCCTCGACACCTTCATTATTTCATATGATTGAAGAGATGCACTTCCTGTTCTCACACCCAACACCGACACTGGTACTCACCGTC
TGCAGGCAGTTGTTCCGTTCGACAGATAGCTCATGCGGCGGCTCGTCGACGGCAAGCCATTGCTCTACATCGAAGTACTGACGCTT
GGTCTCAACTCCAGGTCTGGTCGTCTTTACTTCCACGTATTTAACATACCAGCCGGGCTTATTACCGGAGCCGTCAGAGTTCAGAT
TCAAAAAGCATACTGGGCTCGGAAGACACGGCGCTGTCCCACTGAAAATATCAAGATTGCCGTTCTCGTAGTAGTTGTGACCTTGT
CCCATTACACCACCCCATTTCTCTAGGTCTCCAATGTCGATGTGCTGTCCGGATTTGTCCGAGATTGAAGCCCCTATGATCGAATC
GGTGCCGGAGCTATCTCTCGTTCCGGTTTTGATTTTAAATGTGTAGACGCATTCTTGTTCGGCCGGGGCCGATGCGAAGACAACGG
TGGCGATGAGGAGGAGGGAGAGGAAGAGGGATGGGAGGAGAGAGTCAGTGTGAGCCATAGTTGTTGGAATGTCCTAGTTGTTGATA
TGAATGTAAGAAT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002880432 lipid-associated family protein [Arabidopsis lyrata subsp. lyrata] | 510 | 1e-049 |
| AAM62648 dehydration stress-induced protein [Arabidopsis thaliana] | 507 | 3e-049 |
| NP_565527 PLAT-plant-stress domain-containing protein [Arabidopsis thaliana] | 506 | 3e-049 |
| AAK01359 dehydration stress-induced protein [Brassica napus] | 462 | 4e-044 |
| NP_195683 Lipase/lipooxygenase, PLAT/LH2 family protein [Arabidopsis thaliana] | 456 | 2e-043 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LEG8 Dehydration stress-induced protein | 507 | 2e-049 |
| Q9SIE7 Expressed protein | 506 | 2e-049 |
| Q9AXN5 Dehydration stress-induced protein | 462 | 3e-044 |
| O65660 AT4g39730/T19P19_120 | 456 | 1e-043 |
| A9PBQ7 Predicted protein | 436 | 3e-041 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G22170.1 lipid-associated family protein | 507 | 1e-051 |
| AT4G39730.1 lipid-associated family protein | 457 | 7e-046 |
| AT5G65158.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); BEST Arabidopsis thaliana protein match is: lipid-associated family protein (TAIR:AT2G22170.1); Has 83 Blast hits to 83 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 269 | 4e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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