Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN11520

FASTA Sequence
Unigene ID: UN11520Length: 1413 SSR 
GGGTTGACAAAGCCAACCTCTCCTTTACTCTCTTTCTCTCTCTTTTAGCTCTCTATCTCTCTCTCTCAATGGATGCTCTTAGCTTT
GTGAAATTCTGGCTAACCAATAACACCAACGGCAATAAACCCCGCCGTGAAATCAGAATCTCAGAATCCGCCGTCGAACCCTCCAC
CGCATTGGGAGACTCCGAAGTTGACCTCTTCGAAGAAGATGATTCCTTCTTCGAGCTCGAGATCTCTCTCTCCGACTTCTCCTTAA
AGAAAAACAAAACCCATGAAGAAGAAAAACAGAACACGTTCTCTGTCTCCAAAAGCAAAGTCCTCCCTTTCGTCGAAACCACCTCG
AAACCTCAATCTCCGATCACTCTCCTGAAACCCAGTCAAAAGCTTCGTGCTTTCTCCTTCAAGAAGAAAGAACCCAGCAGCAGAAG
CCTCAACGTAAGGTTCAGATTCGAAGACGAGACAACAACGAGGTGTGAAGACTCTGTTTCTTCCTCTTCAAAGAGATTCTTCGATC
TCATTAAGCCACTGTACAATAAAACAACGAAGAGACAGAGCGTCAACAGTGTATCCACTTCTCCGGCGTCTTCACCGGCGGCGAGA
GAGAAACAGAGGAGTAATGTTACTCGAACTGTGAGGAGACAGCTTGGGAAGAGCCGGTCGGCGTCTGCGGCTGTCGGAGCCATGTC
TCCGGGGAAGAGGCTCGACGAGTCTTTGCAGGTTCAACAAGATGGGATTCAAAGTGCCATTCTCCATTGCAAGAAATCGTTTCACG
GGTCGAGAGAATCTTCTATGTTATCCCGATCTACTAGTGAATCTTCCTCACAAGAGAAACTCAGTACTTCATCTTCTGAAGATTCG
TATTTGTTTTCAAGAATGTCAAGCGATTCATCAGTGTCGGAGAAATCAATGGATAGTCTGACTTCAATCAAGGAACAGAGGGAGAA
GATTTGCGATTAGGGGAATCGAAGTGTAGAAAGCCCTAATTCTTCATCTCATTTTTCAGCCGAACCCTAAAGTCTCACTCTCTCAA
AATTTCTCTTGGTTTTTCGATCTCTCTACAAATCATTGATTCTCTCTACAAATCATTGATTCTCTCTGAGTCTCTACTTCTCAGTT
ATCAATCAGTCTCTGCCTCTGTCTCTCTCTCGCTGAAGAACAAGGTGCTAGCATAGATTCCAATAAATAAAATAGAGCTGATGCTG
TGGTGGTGGCAAGAACAAGAAAGAAGATCGTATGTAATTTTTGAAGGCTGTATTTCAGTCTGGACAAGAACTTATGGTTTGTGTGT
TGTTGTAAACTATGGTTTGGTGTTTGTTGCAATTTGAAAAAATTGTCTTTGTCGCTGAAAATTAAAATCTGGATCGGTTCAATTTG
TTTGTCATGAATTTTTTGTGATTTAGCTTTTTTTTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_200099 uncharacterized protein [Arabidopsis thaliana]6133e-061
XP_002865934 predicted protein [Arabidopsis lyrata subsp. lyrata]6116e-061
XP_002862465 hypothetical protein ARALYDRAFT_359596 [Arabidopsis lyrata subsp. lyrata]4216e-039
XP_002318350 predicted protein [Populus trichocarpa]2253e-016
CBI34403 unnamed protein product [Vitis vinifera]1951e-012

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FLX4 Gb|AAF24565.16132e-061
B9I501 Predicted protein2252e-016
B9N347 Predicted protein1832e-011
B9RCJ1 Putative uncharacterized protein1832e-011
B9GX31 Predicted protein1813e-011

Arabidopsis top hits (Blast detail)Scoree value
AT5G52870.1 unknown protein6141e-063
AT1G64080.1 unknown protein1471e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  20%
 
191  20%
 
201  20%
 
111  20%
 
91  20%

Unigene MembersMember information