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Information for unigene UN13032

FASTA Sequence
Unigene ID: UN13032Length: 1024  SNP
TTTTTTAATCTTAATTTTGTCATTTTATTTATATTTTTTTGAATTATGCATCCACTACAAAAGTTTTCTAGATTCGCCACTGCGTA
CAACCCGACTAACACCTACATAAGCAAACCACACACATAAAAGCATAAGTAAAAGTCCGATAGAGAGTCTAAAATGGTCCGATAGA
GAGTCTATATGTGGCTCGAGATTAATAGGACACACACATTCATAAAGACAAATTAAGGGACCATGAAATAGTAGTAGATGGGTTAT
GAGCTTGCAAATCTTGATGATCAGTCGATGACCAAAGACATAATCTTTTCCTGAAGATTTGGTTGAATCGGCTGAACTCTATATCC
AAATTGCTCATCTTGATCTCTCATCATCATTCCTCTTGTGTTGCTAGCTATAGCCATCTCTTGTTGTTGCAGCTGGAAACTGAGTT
GCCGATTCTCCTCCACCAATATTTTCTCATTTCTCCTCTTTGTCATGAGGAACTCCATCTGGTGGTCTCGGACTTTGTCGAGGCCA
TGTTCAATGGCATGCTCTACGGCCATCAGGTTTTTTAAGTTGAGAGATTGTATATCTTCCCCCTTCAAATGCCTGAGTTCCAGTTG
TAAGCTGTCATTCTCTTTTTTGATCCTATCAATTTCATTGTTGAGGTTCTCATGCTTAGTATCCCATAGTTTCTTGCCAGATAACT
TCTGGTATTGGTCCAACATAGCACCAAGATCCATGGAAGGACAACAATAGTCAGTCATCTTACCATTACTTGCAAAGATTATGAGA
GCAACTTTTGCATCGCAGAGAACAGTGATCTCTTTAGCCTTCTTCACCAACCCATTCCTCCTCTTTGAGAAAGTCACCACTCTGTT
GTTTGCGTTTTCTATCCTTTTTATCTCTATCTTCCCTCTTCCCATCTTTCTCTCTCTAGCTCTCTTTTCTCAGTTTTAGGGTTTGC
TATGAAATTGTTAAGATATGAAGGAGATTATATGTGGAGAAAAGGAGTAGCATTGGTCTCAAAGAAACATTGATGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABW74343 PISTILLATA-1 [Brassica napus]10282e-109
AAY63867 PISTILLATA [Brassica juncea]10173e-108
ABW74344 PISTILLATA-2 [Brassica napus]10139e-108
NP_197524 Floral homeotic protein PISTILLATA [Arabidopsis thaliana]9976e-106
AAD51995 floral homeotic protein PI [Arabidopsis thaliana]9941e-105

Swiss-Prot top hits (Blast detail)Scoree value
P48007 Floral homeotic protein PISTILLATA9973e-107
Q07474 Floral homeotic protein PMADS 25913e-060
Q03416 Floral homeotic protein GLOBOSA5682e-057
Q03378 Floral homeotic protein GLOBOSA5644e-057
Q40702 MADS-box transcription factor 25502e-055

TrEMBL top hits (Blast detail)Scoree value
A8V345 PISTILLATA-110281e-109
Q4PRG6 PISTILLATA10172e-108
A8V347 PISTILLATA-210136e-108
Q9SEF9 Pistillata9912e-105
C1IDW5 PISTILLATA-like protein (Fragment)9293e-098

Arabidopsis top hits (Blast detail)Scoree value
AT5G20240.1 PI (PISTILLATA); DNA binding / transcription factor9982e-108
AT5G23260.1 TT16 (TRANSPARENT TESTA16); transcription factor3252e-030
AT5G23260.2 TT16 (TRANSPARENT TESTA16); transcription factor3191e-029
AT5G23260.3 TT16 (TRANSPARENT TESTA16); transcription factor3082e-028
AT2G45650.1 AGL6 (AGAMOUS-LIKE 6); DNA binding / transcription factor3046e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
107  37%
 
114  21%
 
122  11%
 
92  11%
 
82  11%
 
72  11%

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