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Information for unigene UN13109

FASTA Sequence
Unigene ID: UN13109Length: 1089  SNP
AAGAGAACAAAGCCAAAGATTCAGACAGAACAAAACCTTTATTGTCGGAAGCTGACTCACCACCCTATTATAAATACACAAATGTC
TCTAGCGGCAATTATATGCTAGATTCACAAACCGCTAATAACCAATCATAATCTCGATCTCTTCTCTTTCATCTTTAATCTCGAAT
CATAAACAAAAGCTTCCTAATTTATATTCTTCTGTGTATCTTCTTCTTGTTTCTCAATTCTCATCGTTAGAATCGAAAATGGGTCG
AATCAGCATAGTGGCTTCTGATCTGGTATTGTCCTTTATGTGGACATGGGCAGGAGTTCTTGTCAACATCTTAGTTCACGGAGTAC
TCGGATTCAGCCGGAAAGATACCACCGGCGAGATCGTCCGGTATCTATTCTCCGTCATCTCCATGTTCGTCTTCGCTTTCCTTCAG
AAACTCACCAAAGGCGGACTTTACAACCCTTTGACCGCTTTGGCTGCCGGTGTCACCGGTGGCTTCGGTAGTTTCATCTTCACCGT
CCTGGTTCGAATCCCCGTTGAGGTGATGGGATCAATCCTTGGGGTTAAACATATCATTCATGTTTTCCCTGAGATTGGGAAAGGAC
CAAAACTAAATGTAGCGATCCATCACGGTGCTTTAACCGAGGGGGTACTAACATTCTTCATTGTAATGCTCTCAATGGGACTAGCA
AGAAAGATCCCTGGAAGTTTCTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTAAGTCTCCATGTTCTTGGAGCTGATCTAAC
CGGCGGATGCATGAATCCAGCAGCGGTTATGGGATGGGCTTATGCACGCGGTGAGCATATAACACAGGAGCATTTACTTGTGTATT
GGCTTGGACCTATAAAGGCGACATTGCTTGCTGTTTGGTTCTTCAATGTCGTGTTTAAGCCTCTCACCGAAGAACAAGAGAAACCT
AAGGCTAAATCTGATTGAGTAATAGAGTTTTAGCTCTCATATTCAATCCTCTTCTCATTAGTTTACCTTAATGCGTTTATGTATGT
AGCAAACTCAACTGTAACAATCAGTTCAATAAAACCTGCAGAGTATTTTGGTTTATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878121 SIP2_1 [Arabidopsis lyrata subsp. lyrata]11178e-120
NP_191254 putative aquaporin SIP2-1 [Arabidopsis thaliana]11161e-119
NP_001190113 putative aquaporin SIP2-1 [Arabidopsis thaliana]11161e-119
XP_002283874 PREDICTED: hypothetical protein [Vitis vinifera]7853e-081
XP_002322583 aquaporin, MIP family, SIP subfamily [Populus trichocarpa]7728e-080

Swiss-Prot top hits (Blast detail)Scoree value
Q9M1K3 Probable aquaporin SIP2-111165e-121
Q10M80 Aquaporin SIP2-15753e-058
Q9ATM1 Aquaporin SIP2-15682e-057
Q5VR89 Aquaporin SIP1-12983e-026
Q9ATM3 Aquaporin SIP1-12841e-024

TrEMBL top hits (Blast detail)Scoree value
B9IHH4 Aquaporin, MIP family, SIP subfamily7726e-080
B7FN52 Putative uncharacterized protein7682e-079
B9SCG0 Aquaporin sip2.1, putative7582e-078
B9HDR6 Aquaporin, MIP family, SIP subfamily7296e-075
C6TKZ8 Putative uncharacterized protein7109e-073

Arabidopsis top hits (Blast detail)Scoree value
AT3G56950.1 SIP2;1; transporter11173e-122
AT3G04090.1 SIP1A (SMALL AND BASIC INTRINSIC PROTEIN 1A); water channel2723e-024
AT5G18290.1 SIP1;2; water channel2633e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  21%
 
72  11%
 
83  16%
 
94  21%
 
122  11%
 
103  16%
 
111  5%

Unigene MembersMember information