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Information for unigene UN13109
FASTA Sequence |
Unigene ID: UN13109 | Length: 1089 |
| SNP | AAGAGAACAAAGCCAAAGATTCAGACAGAACAAAACCTTTATTGTCGGAAGCTGACTCACCACCCTATTATAAATACACAAATGTC
TCTAGCGGCAATTATATGCTAGATTCACAAACCGCTAATAACCAATCATAATCTCGATCTCTTCTCTTTCATCTTTAATCTCGAAT
CATAAACAAAAGCTTCCTAATTTATATTCTTCTGTGTATCTTCTTCTTGTTTCTCAATTCTCATCGTTAGAATCGAAAATGGGTCG
AATCAGCATAGTGGCTTCTGATCTGGTATTGTCCTTTATGTGGACATGGGCAGGAGTTCTTGTCAACATCTTAGTTCACGGAGTAC
TCGGATTCAGCCGGAAAGATACCACCGGCGAGATCGTCCGGTATCTATTCTCCGTCATCTCCATGTTCGTCTTCGCTTTCCTTCAG
AAACTCACCAAAGGCGGACTTTACAACCCTTTGACCGCTTTGGCTGCCGGTGTCACCGGTGGCTTCGGTAGTTTCATCTTCACCGT
CCTGGTTCGAATCCCCGTTGAGGTGATGGGATCAATCCTTGGGGTTAAACATATCATTCATGTTTTCCCTGAGATTGGGAAAGGAC
CAAAACTAAATGTAGCGATCCATCACGGTGCTTTAACCGAGGGGGTACTAACATTCTTCATTGTAATGCTCTCAATGGGACTAGCA
AGAAAGATCCCTGGAAGTTTCTTCATGAAGACTTGGATTGGTAGCATTGCTAAATTAAGTCTCCATGTTCTTGGAGCTGATCTAAC
CGGCGGATGCATGAATCCAGCAGCGGTTATGGGATGGGCTTATGCACGCGGTGAGCATATAACACAGGAGCATTTACTTGTGTATT
GGCTTGGACCTATAAAGGCGACATTGCTTGCTGTTTGGTTCTTCAATGTCGTGTTTAAGCCTCTCACCGAAGAACAAGAGAAACCT
AAGGCTAAATCTGATTGAGTAATAGAGTTTTAGCTCTCATATTCAATCCTCTTCTCATTAGTTTACCTTAATGCGTTTATGTATGT
AGCAAACTCAACTGTAACAATCAGTTCAATAAAACCTGCAGAGTATTTTGGTTTATC
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GenBank top hits (Blast detail) | Score | e value |
XP_002878121 SIP2_1 [Arabidopsis lyrata subsp. lyrata] | 1117 | 8e-120 |
NP_191254 putative aquaporin SIP2-1 [Arabidopsis thaliana] | 1116 | 1e-119 |
NP_001190113 putative aquaporin SIP2-1 [Arabidopsis thaliana] | 1116 | 1e-119 |
XP_002283874 PREDICTED: hypothetical protein [Vitis vinifera] | 785 | 3e-081 |
XP_002322583 aquaporin, MIP family, SIP subfamily [Populus trichocarpa] | 772 | 8e-080 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9M1K3 Probable aquaporin SIP2-1 | 1116 | 5e-121 |
Q10M80 Aquaporin SIP2-1 | 575 | 3e-058 |
Q9ATM1 Aquaporin SIP2-1 | 568 | 2e-057 |
Q5VR89 Aquaporin SIP1-1 | 298 | 3e-026 |
Q9ATM3 Aquaporin SIP1-1 | 284 | 1e-024 |
TrEMBL top hits (Blast detail) | Score | e value |
B9IHH4 Aquaporin, MIP family, SIP subfamily | 772 | 6e-080 |
B7FN52 Putative uncharacterized protein | 768 | 2e-079 |
B9SCG0 Aquaporin sip2.1, putative | 758 | 2e-078 |
B9HDR6 Aquaporin, MIP family, SIP subfamily | 729 | 6e-075 |
C6TKZ8 Putative uncharacterized protein | 710 | 9e-073 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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