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Information for unigene UN13141

FASTA Sequence
Unigene ID: UN13141Length: 1853 SSRSNP
AAAATCGAACGGCTAAGCTGCCCTCTTAACACTTTCGAGTATGATTATAACCCATCATTTATTACATAAACCACATGTATTTCCAA
TTATACCATGGTGTTCCCTTTCCCTTCTATATATCTTTCTATTATAAGATACAGCTGTAACAATTTAATACTCACACTTTGATTCC
CGTAAACAAAGGGTCACCGCAGAAACATTAATGATTTTGGCATTTTTATAAAACAAAAACTGAAAAATACAGAAATCTATCTTGTA
AATAATTGTTTTTTTTTCTTGTAAAACAGAAAATAGACATGTGATGATAATGAAGGGAGAGAGAGAGAGATTATTAAGAGGATTCG
TCGGCGCGAGAGTTTTCCTTTTTCACCCTCGGCTGTATCCCATAATAACTAACGTACCACTTGACGAACTTCCTCAACCCCGCTGC
GAGATCCGTCGTCGGTTTATACCCGAAATCTCTATACGCTAAGCTCACGTTAGCATGCGTGTAAGGCACGTCACCGTTTCTAGGCA
TTTTGATCAGATGCTTCTTCGCTTTCGTCCCTAACAACCCTTCCAATATCGAAACCAATCTCCCGACCGGAACCGGAGACGTGTTC
CCGAGATTATAAACACGTAACTGAGCCGGTCCTCGCTTCTTTCCCCCGCTTCCGGTGCTCTTCTCCGCCGTGTCTAACGCACCGAC
ACACCCTTTGACTATATCGTCGATGTAGGTGAAGTCACGCGCCACTTCTTGGTTGTCCTGAGTTCTGTAGATGTCGATAGACTTCC
CGTGGAGTATGGCTTTAGTGAAGAAGAAGTAAGCCATGTCCGGTCTTCCCCAAGGACCGTAAACCGTAAAGAACCGGAGTCCGGTT
AAAGAAAGACCGTAGATGTGATTGTAAGTGTGTGCTATCTCCTCCCCTGCTTTCTTCGTCGCGGCGTAAAGACTCGCCGGCTGATC
CGTTCTGTGCTCTTCGGAGAAAGGATTCTCGGTGTTGAGTCCGTACACGGAGCTCGACGAAGCCCAGACGATCGCGGGCTGAGGGT
TAGCTGCTTTGGCTACTTCGAGGAGGTTGACGAGACCAGCGATGTTGGAGCTGATGTAAGACTGAGGGTTCTTCATGGCGTAACGA
ACTCCGGCTTGAGCTGCTAAGTGGAGGACGTGAGTGAATGGGACGATGTCGAAGAGCTTACGCAGGAGAGGACCGTCGTTGAGATC
TCCTTGGACGATGAACACTTGGTTCTTCTCTAGGAGCTGTTGTCTCGCTCTTTTGAGCGATGGATCGTAGTAGTCGTTGAAGTTGT
CGAATCCCAAAACTCCGTCTCCGCGTTTTCTAAGCGCGATTGAGCAGTGAGATCCGACGAATCCGGCGGCTCCGGTGACGAGGACG
GAGAGGCCATGCTGTCGTTTTGCTGTTGAGGATTGTCTCACGCGCTTCTCCCAAGCGGCTCCTTCGCCTAGTGAGGAGGAGGAGGA
GGAGGAGGAGAAGAGTCCGGTGGATAAGAAGCTGCGACGGTGGAGATGGTGGGTGTCGGAGTGTGGATGGTAGTTGACAGCGAAGA
GTAGGACAAGGACTAGAGCGATGAGGAGTGTTGCTCGGAAAAGGACTTTAGAAGAAGCCTTTAGGACTTTTGTGCTGTGGATCTTG
CGGAGGTAGCTGTTGTACCTCTCCAGCTTCACCGTCTTGCTTGTATCCGCAGTAGCCGACAGTGGCATTTTCGACTTTTGATGGAA
ACTCGAACTGATTTAGATTTGTCAATCGATTCTTCTCTCTGAATCGAAGAAGAGGCTTGAAAAAGTGTCGATAACAATTTTTATGG
GACTTGAGGGTTTCAGAGAGTTTTTTTCTTTCTAGCCCTGAGAAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002883465 hypothetical protein ARALYDRAFT_898926 [Arabidopsis lyrata subsp. lyrata]22184e-247
NP_189024 UDP-D-glucuronate 4-epimerase 6 [Arabidopsis thaliana]22141e-246
AAN60250 unknown [Arabidopsis thaliana]22094e-246
ADB24770 UDP-D-glucuronic acid 4-epimerase [Gossypium hirsutum]19381e-214
ADB24769 UDP-D-glucuronic acid 4-epimerase [Gossypium hirsutum]19228e-213

Swiss-Prot top hits (Blast detail)Scoree value
Q9LIS3 UDP-glucuronate 4-epimerase 622145e-248
Q9LPC1 UDP-glucuronate 4-epimerase 214538e-160
O81312 UDP-glucuronate 4-epimerase 314483e-159
O22141 UDP-glucuronate 4-epimerase 414465e-159
Q9STI6 UDP-glucuronate 4-epimerase 514242e-156

TrEMBL top hits (Blast detail)Scoree value
D2WK29 UDP-D-glucuronic acid 4-epimerase19387e-215
D2WK28 UDP-D-glucuronic acid 4-epimerase19225e-213
A9P9K8 Predicted protein19128e-212
B9N0T8 Predicted protein19055e-211
Q2PEY6 Putative NAD dependent epimerase18841e-208

Arabidopsis top hits (Blast detail)Scoree value
AT3G23820.1 GAE6 (UDP-D-GLUCURONATE 4-EPIMERASE 6); UDP-glucuronate 4-epimerase/ catalytic22153e-249
AT1G02000.1 GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2); UDP-glucuronate 4-epimerase/ catalytic14537e-161
AT4G00110.1 GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3); UDP-glucuronate 4-epimerase/ catalytic14483e-160
AT2G45310.1 GAE4 (UDP-D-GLUCURONATE 4-EPIMERASE 4); binding / catalytic/ coenzyme binding / racemase and epimerase, acting on carbohydrates and derivatives14464e-160
AT4G12250.1 GAE5 (UDP-D-GLUCURONATE 4-EPIMERASE 5); UDP-glucuronate 4-epimerase/ catalytic14242e-157

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  15%
 
112  15%
 
101  8%
 
214  31%
 
183  23%
 
201  8%

Unigene MembersMember information