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Information for unigene UN13232
| FASTA Sequence |
| Unigene ID: UN13232 | Length: 2055 |
SSR | SNP | AAAACTTTAAAAATTCAACACATGTCAAAAAAAAAGACCAAACAAAGTGGATTCTACTCTTTTTTTTTAATCTTTTTTTTTTGAAC
ACATCAAGTGGATTCTATATTACTCACAAATGAAGATACAAATCAAAGCAGACCAGTGCTGCGGAACGGGTTATTATTGTGTTGGT
TAACCGCGAAATCACCAAACCCGCTCGTATTTGGCTGCTGTGAAACCGGGTTAACCGGGAATTCCCCAAACTCACCGAATGGATTA
TTACTGTAATTATTATTGGCTGTGGGGTTTGGGAGTGCTAGCTGTAGTTGCTGCTGCGGCTGATGATGATACGTTGGCTGGTAAGC
ACCAAAAGGGTTGTTGACAGCTGACTGCTGAGCTGCTGGATTGCCATTGGACGATGCAAAAGGGTCATGATGAACCTCAAATGGGT
TGGGAGCTGGTGCACCGTAGACAGGACGTTGGGAGGCTATGTAGGCTCCATCATCGTATAGACTGTTTAGTGTAAGCGTGTCTAAG
CCTCCACCCAATTGCCTATCGGTGGCTGCAGAGATATCGTTGCTTGGTGTTGTTACCAGGGCAAGCTCCCATCCTGAAGGGTCATA
ATCGTTTGCGTGACCAAACCGAGGCGTTGAAGGGTTACCATCAGTTGAGATTATGGCTAAAGCAAGTGCGTTTTGGTTCTCAATCG
CTGATGCATCAGGACCACCAGTGTTCAGACCCAGTAGATCATCTGTATCAATGATGTTCTGAGACTGAGTGTTGGCTGAAGGAGGA
GGAGGAGGAGGCGGGGGAGAAGGTTCAGTCTCTTCAGATACAAGAACGACATCATCTGAAGGCAACACAACTTCACGTTCTACATG
AGACGGTTCAGCATCTTCGTCAGGAAGTCCATCATCCGGCCTATAAGTTAGAAGCAGTGGCTCAGCTGGGGCATCGACGGCACGTG
GGGCTTCTTTGATATACTCCTCCATTGTACTCAGAAAAGATTGTGGGGGCTCTCTTAGTACAGGAAACTGAAAATTCCTTGCGAGT
TCCAATCCTTTACAGGCTTCATAGAATTCAGAGAGGCTACGAGCCTGTTGACCAGCACGCTTGTATATTTCAAGGGAACTGATGGC
TTCGTGTTTTGGCATTTCAAAGAACTTGTCAATGAGATTGATAATTCCATCATTGATAGCACAATAGACTTTAAAACTCTCCTTTA
ACACCAGAGCAAGTGCATATTGTATAACATGGTTGTGGTTAGCAGCACCTTCCGGCCTGCAACCAATGAGACGATAGAGAAGCTGC
TGCAAAGCAGGCACCTGCACCAAGATTTCTTCCCCATCTAAATCCCTGGTTCTACTATACCCCTTATCCTGCCCTGGGGTAGCCTT
TGGAAGACGCTCAGCCTCAGTATCATATTTCAAAACCTTGAAGCACTCAAGCCGTTCCTCAAGAAACAATGCATAAGTACGTACCC
AAGCTGAGCAATCCCAAGCAATAGGACTTGAATCATCCTTGAAATTAGAAAGCTGCAGAATCCTCCCTCTCTGCGAAAAGTTAAGT
AGCTCCTCCCTAAACGTCGGATCTCCTTCCCTTAGAAGCCGATGAATCACAATCAGCGTCTTCAGTGCAACCGTCCAGTTTCTTGT
TTTGTGCAAGCGGCGAGAAAGGGCGTGAATGCAATAAGCAACATCTGCTCGAGCACGAGTCACTACTGTTGCAGCGAATATTTTTC
TGAGATGACGATCTTTGGGAGGACACTCGACGTGGTTGGTGGCTTTGACGATGGCAACGTCTAAATCGGCGTAATCGCTGTTGACG
CGGACAAGGCCGACTTTGGTGGTGTCTTTTAGGGCTCCATAAGCTTTACGCCATGTCTGCATCGTTCCCATCGGATCAGGCGAGAC
TCGTTCAGATCTCTCAACTCTCCCGACGAATCCGGAGATTACGTGTCTCAATCTTCAACCTCCGGGGAAAATTCACAGAGAAAGCA
AAGTGAAGAAGGAGACGCGATTTATTCCGCTTTCTCTTTTTTCTGTTTTCTTTTTATTTAAAGAAGGAAATTATCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565267 putative clathrin assembly protein [Arabidopsis thaliana] | 2548 | 2e-285 |
| XP_002875082 hypothetical protein ARALYDRAFT_904366 [Arabidopsis lyrata subsp. lyrata] | 2374 | 3e-265 |
| NP_172944 putative clathrin assembly protein [Arabidopsis thaliana] | 2029 | 3e-225 |
| XP_002527787 clathrin assembly protein, putative [Ricinus communis] | 1999 | 1e-221 |
| XP_002311513 predicted protein [Populus trichocarpa] | 1979 | 2e-219 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LBH2 Putative clathrin assembly protein At2g01600 | 2587 | 3e-291 |
| P94017 Putative clathrin assembly protein At1g14910 | 2029 | 1e-226 |
| Q9LVD8 Putative clathrin assembly protein At5g57200 | 1455 | 5e-160 |
| Q8VYT2 Putative clathrin assembly protein At4g25940 | 1362 | 3e-149 |
| Q9LHS0 Putative clathrin assembly protein At5g35200 | 963 | 6e-103 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SP68 Clathrin assembly protein, putative | 1999 | 7e-222 |
| B9HJD6 Predicted protein | 1979 | 1e-219 |
| Q0DG77 Os05g0549000 protein | 1743 | 3e-192 |
| A2Y754 Putative uncharacterized protein | 1738 | 1e-191 |
| C5YUZ0 Putative uncharacterized protein Sb09g027370 | 1730 | 1e-190 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G01600.1 epsin N-terminal homology (ENTH) domain-containing protein | 2588 | 2e-292 |
| AT1G14910.1 epsin N-terminal homology (ENTH) domain-containing protein | 2029 | 1e-227 |
| AT5G57200.1 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related | 1455 | 4e-161 |
| AT4G25940.1 epsin N-terminal homology (ENTH) domain-containing protein | 1362 | 3e-150 |
| AT5G35200.1 epsin N-terminal homology (ENTH) domain-containing protein | 963 | 5e-104 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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