 |
Information for unigene UN13306
| FASTA Sequence |
| Unigene ID: UN13306 | Length: 1553 |
| SNP | GGAGCTTCGCAGCAATAACTCCAGCTAAAGAAAAAAAAACGGAACCCTAGCGAAGCGAATCTTTCTGAGCTTCCCGTCTCCTCCTC
CTCCTTGAAGCTACACTGATAGAGAAAGGATGCCTCCGAAAGGGAAAGCAAAGGATGCAGGTCCCGTAGAGAGGCCAATCCTTGGC
CGTTTCTCTTCTCACCTCAAGATCGGAATCGTAGGGTTACCAAACGTGGGAAAGTCAACACTTTTCAACACCCTAACGAAGCTTTC
AATCCCAGCTGAGAACTTCCCCTTTTGTACCATTGAGCCCAACGAGGCACGTGTCAATATCCCCGATGACAGGTTTGATTGGCTTT
GTCAATTGTACAAGCCCAAGAGTGAGATTCCTGCTTTCTTGGAAATTCATGACATTGCTGGCCTTGTTCGAGGCGCTCATGAAGGA
CAGGGTCTTGGAAACAACTTCTTGTCTCATATTCGTGCTGTTGATGGCATCTTCCATGTTCTACGTGCCTTTGAAGATCCTGATAT
TATTCATGTTGATGATATTGTGGATCCTGTTAGAGATTTGGAGACCATTACTGAAGAATTGCGTCTCAAGGATATTGAATTCATTA
AAAAGAAGATTGAAGATGTCGAGAAGAGCATGAAGAGGAGCAATGACAAGGCGCTTAAAGTCGAACTTGAGCTCTTGCTAAAGGTA
AAAGCTTGGCTGGAAGAAGGAAAGGATGTCCGTTTTGGGGACTGGAAAGCAGCTGATATCGAGATTCTGAACACTTTCCAATTGCT
TTCCGCTAAGCCCGTTGTTTACTTGATTAACATGAATGAGAGAGACTACCAGAGGAAGAAAAACAAGTTCCTGCCGAAGATTCATG
CTTGGGTTCAAGAACACGGTGGTGATACTATGATTCCTTTCAGTGGTGTTTTCGAAAGGAGTCTCGCTGATATGCTCCCAGACGAA
GCAGCAAAGTATTGTGAGGAGAACAAACTGCAAAGTGCTCTTCCGAGGATCATCAAAACTGGATTTTCAGCTATTAACCTCATATA
TTTCTTTACAGCTGGGCCTGATGAGGTGAAGTGCTGGCAAATAAGACGTCAGTCAAAGGCTCCTCAAGCTGCAGGGGCCATTCATA
CTGATTTTGAGAGAGGATTCATTTGTGCCGAGGTCATGAAGTTTGAGGATCTCAAGGAACTTGGCAATGAAACTGCAGTCAAGGGG
GCAGGGAAATACAGACAGGAGGGGAAAACATATGTTGTTCAGGACGGAGATATCATTTTCTTCAAGTTCAACGTTTCCGGTGGTGG
GAAGAAATGAGAGATTCCAATCTTGTCTTTTTACCTATTTCGTGGTATCCTCTCCAGATCTTGAAGCTTTATACAACTTCGAGAGA
TGAACCAAAACTGTATTTTCTGTTTCCAAAGTTTTTTATTGGCTTTACTAAAACACAATCTAGTATCTGTAACTCTTGTTCCTTTC
TGCAGTTATTTAAGACATGTCTTTGGCCTTTACCAGCCTGCTGTATTTGTAGAACTCCCTTTCAATAATCTGAAACAAATACCTTA
AAACC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002893634 GTP binding protein [Arabidopsis lyrata subsp. lyrata] | 1993 | 4e-221 |
| NP_174346 GTP-binding protein [Arabidopsis thaliana] | 1991 | 6e-221 |
| AAM63059 putative GTP-binding protein [Arabidopsis thaliana] | 1986 | 2e-220 |
| XP_002330603 predicted protein [Populus trichocarpa] | 1856 | 3e-205 |
| XP_002263885 PREDICTED: hypothetical protein [Vitis vinifera] | 1840 | 2e-203 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5ZM25 Obg-like ATPase 1 | 1257 | 3e-137 |
| Q7ZU42 Obg-like ATPase 1 | 1241 | 2e-135 |
| Q9NTK5 Obg-like ATPase 1 | 1226 | 1e-133 |
| Q2HJ33 Obg-like ATPase 1 | 1225 | 2e-133 |
| Q7ZWM6 Obg-like ATPase 1 | 1224 | 2e-133 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SA73 At1g30580 | 1991 | 4e-221 |
| Q8LDR5 Putative GTP-binding protein | 1986 | 2e-220 |
| B9N5P8 Predicted protein | 1856 | 2e-205 |
| B9SB24 GTP-dependent nucleic acid-binding protein engD, putative | 1838 | 2e-203 |
| B9GH21 Predicted protein | 1828 | 3e-202 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
