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Information for unigene UN13497
| FASTA Sequence |
| Unigene ID: UN13497 | Length: 1320 |
SSR | SNP | TGACTCTCACGATCTCTTCTCTCTCTCTCTCTCTCTCTCTTATAACTCGGATCACCACATGACTCAATCTCCTCCTCCTTCCCGTT
AAAACACAGAACCAAACTCCCTAAAGGTTCGGTTCTTTTTTTTCTTCTTTTCTCCTTCTCTCTCCGATACATTTTGGAAACAAACT
TCTCAAGGCTTTTTTGAGAAGGGAGGAGGGGGAGGAAGACGAGTTGATCTGATCTGATTTTGATTTGATGTCTGGAGCTGTATCTG
GTTCCAGGGACATGGGGTTCGACGACGAAAACACTTCCAAAACGTCTCATCAACACGATGGCACCGACGACGAGGGTGCTGCTGGA
TCCTTGGGGAGGCAAATGAGCGAAGCCTCTCTTAGCGCTGCCGAGGAAGAAGAAGACGATGATTCCAAATTACAATTGGGTCCTCA
GTACACTATCAAGGAACATCTCGAGAAGGATAAGGATGATGAGAGTCTGAGGAAGTGGAAAGAACAGCTTCTTGGAAGTGTTGATG
TCACCAACATTGGAGAGACTCTTGACCCTGAAGTGAAGATCATTAGCCTGGCCATCTTATCCCCTGGAAGACCTGATATCGTTCTT
ATGGTTCCGGAGAATGGGAATCCAAAGGGGATGTGGTTTACTTTGAAAGAAGGGAGCAAGTACAACTTGAAGTTCACGTTTCAGGT
TAATAACAACATTGTCTCTGGTCTTAGGTACACCAATACTGTTTGGAAGACCGGTGTTAAAGTGGACAGAGGAAAGGAAATGCTTG
GAACCTTTAGTCCTCAGTCGGAGCCATACAACCACGTGATGCCTGAAGAGACCACTCCTTCTGGCATGTTTGCTCGAGGATCATAT
TCTGCTAGAACTAAGTTTCTTGATGATGATAACAAGTGCTACTTGGAGATCAACTACAGCTTCGACATCCGTAAAGAATGGGCTGC
GGTTTGAAACTCGAGAACAAAGTCTCCTGAGATGAAGTGTTTGTCAGTAGAAGTTGTGTGTTTGTTATTTCACTCCCTATCTCCTT
TTTCTCATCGTTGAACATATTATTGTGAATCGTTTTTTTTCCTCTTCCGGTTATTATCGTAGAACAAGAGCGACATTTATTTCCTC
TTTGGTCTTGATTTTTTTTGTCGAGTAAGAAAGACAGTGATTGTTCTCAAGTCAATCTTTAGCTTCATAAAATGTGTTTGATGGAT
ATGATTGTGTTAAGACCCTGAGATGTATAAATGATTAATTGTCAGAGTCAAAAGCTAAAGAGATGAAAGTTAAAAAGAGAAGGTAT
TTGCTTTCGAAGAGAAGGAATTTTTATTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882555 rho GDP-dissociation inhibitor family protein [Arabidopsis lyrata subsp. lyrata] | 1061 | 3e-113 |
| NP_187445 Rho GDP-dissociation inhibitor 1 [Arabidopsis thaliana] | 1056 | 1e-112 |
| XP_002532283 Rho GDP-dissociation inhibitor, putative [Ricinus communis] | 919 | 1e-096 |
| XP_002520560 Rho GDP-dissociation inhibitor, putative [Ricinus communis] | 884 | 1e-092 |
| CAF02296 Rho GDP dissociation inhibitor 2 [Medicago truncatula] | 863 | 3e-090 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SFC6 Rho GDP-dissociation inhibitor 1 | 1056 | 6e-114 |
| P52565 Rho GDP-dissociation inhibitor 1 | 339 | 8e-031 |
| Q4R4J0 Rho GDP-dissociation inhibitor 1 | 339 | 8e-031 |
| P19803 Rho GDP-dissociation inhibitor 1 | 338 | 1e-030 |
| Q99PT1 Rho GDP-dissociation inhibitor 1 | 337 | 1e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q541X0 Putative RHO GDP-dissociation inhibitor 1 | 1056 | 9e-113 |
| B9T214 Rho GDP-dissociation inhibitor, putative | 919 | 7e-097 |
| B9S3J1 Rho GDP-dissociation inhibitor, putative | 884 | 8e-093 |
| Q705X3 RHO protein GDP dissociation inhibitor | 863 | 2e-090 |
| B9HCG9 Predicted protein | 856 | 1e-089 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G07880.1 Rho GDP-dissociation inhibitor family protein | 1057 | 4e-115 |
| AT1G62450.1 Rho GDP-dissociation inhibitor family protein | 755 | 4e-080 |
| AT1G12070.1 Rho GDP-dissociation inhibitor family protein | 718 | 8e-076 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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