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Information for unigene UN13718
| FASTA Sequence |
| Unigene ID: UN13718 | Length: 1830 |
| SNP | TCTCTACCGAGATTGTTAACCGTGGGATCGAACCTTCTGGTCCAAACGCCGGTTCACCAACGTTCTCGGTCAGAGTTCGGAGACGT
TTACCGGATTTTCTTCAATCCGTAAACTTGAAGTACGTGAAACTTGGTTATCACTACCTCATAAACCATGCGGTTTACTTGGCGAC
CATACCGGTTCTCGTGCTTGTGTTTAGTGCCGAAGTTGGGAGTTTAAGCAGAGAAGAGATTTGGAAGAAGCTTTGGGATTATGATC
TCGCAACCGTCATCGGATTCTTCGGTGTCTTTGTCTTAACCGTTTGTGTCTACTTCATGTCTCGTCCTCGGTCTGTTTATCTCATT
GATTTCGCTTGTTTCAAGCCTTCCGATGAACTTAAGGTGACGAGAGAAGAGTTCATAGAACTAGCAAGAAAATCAGGGAAGTTCGA
CGAAGAGATCCTCGGATTCAAGAAGAGGATCCTCCAAGCCTCAGGCATAGGCGATGAGACGTACGTCCCAAGATCAATCTCTTCGT
CGGAAAACATATCAACGATGAAAGAAGGTCGTGAAGAAGCCTCGATGATGATATTCGGCGCACTCGACGAACTTTTCGAGAAGACA
CGTGTCAAACCGAAAGACGTGGGCGTCCTTGTGGTCAACTGCAGTATCTTTAACCCGACTCCGTCACTATCTGCCATGGTGATCAA
CCACTACAAGATGAGAGGAAACATACTCAGCTACAATCTCGGAGGGATGGGTTGCTCGGCAGGAATCATAGCCGTTGATCTTGCTC
GTGACATGCTTCAGTCTAACCCGAATAGTTATGCGGTCGTTGTGAGTACCGAGATGGTTGGGTATAACTGGTACGTGGGACGTGAC
AAGTCGATGGTTATACCTAATTGCTTCTTTAGGATGGGTTGCTCCGCCGTTATGCTCTCTAACCGCCGCCGTGACTTCCGCCATGC
TAAGTACCGCCTCGAGCACATTGTCCGGACTCACAAGGCTGCCGACGACCGCAGCTTCAGGAGTGTGTACCAGGAAGAAGATGAAC
AAGGATTCAAGGGATTAAAAATAAGCAGAGACCTAATGGAAGTTGGAGGTGAAGCTCTCAAGACCAACATCACTACCTTAGGCCCT
CTCGTCCTACCTTTCTCCGAGCAGCTTCTCTTCTTTGCCGCTTTGCTCCGTAGAACTTTCTTACCCGCCGCCAAAACTACTACCAC
CTCCTCCTCCTCCCCCGCAACTGCGAAAACCAACGGAGCCAAGTCTTCGTCGTCCTCTGATCTATCCAAGCCGTACATCCCGGACT
ACAAGCTCGCCTTCGAGCATTTCTGCTTCCACGCGGCAAGCAAAACAGTGCTTGAGGAGCTTCAGAAGAATCTAGGCTTGAGTGAT
GAGAACATGGAGGCTTCTAAGATGACTTTGCACAGGTTTGGAAACACTTCTAGCAGTGGGATCTGGTACGAGCTTGCTTACATGGA
GGCCAAGGAGAGTGTCCGTAGAGGCGATAGGGTTTGGCAGATTGCTTTTGGGTCAGGTTTTAAGTGTAACAGTGTGGTTTGGAAGG
CAATGAGGAAGGTGAAGAAGCCGGCGAGGAACAATCCTTGGGTGGATTGCATTGACCGTTACCCTGCCGCTCTCTGATCATTTATT
TTTATAAATTATTATTTCTTCTAAAATTAAATCATCTAGTTATTCCAACCAAAGGAGAGACAATTTGGTTGGGCTCTCTTCCTTGT
TGTTTGCTGGTCATTCGTATCTAAGACTTCTATAAGGATGTTTCAAGTCCAATTCAGGTTCAATTTTTTGTTTGTGTTATATTCGG
CCTCAGTAAACTTTGAAATTATAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34066 unnamed protein product [Thellungiella halophila] | 2667 | 3e-299 |
| NP_180193 3-ketoacyl-CoA synthase 10 [Arabidopsis thaliana] | 2663 | 9e-299 |
| XP_002880771 predicted protein [Arabidopsis lyrata subsp. lyrata] | 2661 | 2e-298 |
| AAF73980 fiddlehead protein [Arabidopsis thaliana] | 2659 | 3e-298 |
| AAF73976 fiddlehead protein [Arabidopsis thaliana] | 2656 | 6e-298 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q570B4 3-ketoacyl-CoA synthase 10 | 2663 | 4e-300 |
| Q9LN49 3-ketoacyl-CoA synthase 4 | 1114 | 2e-120 |
| O48780 3-ketoacyl-CoA synthase 11 | 1063 | 1e-114 |
| Q9SIX1 3-ketoacyl-CoA synthase 9 | 1053 | 2e-113 |
| Q5XEP9 3-ketoacyl-CoA synthase 17 | 1022 | 7e-110 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VWP9 Fiddlehead-like protein | 1744 | 2e-192 |
| B9HCP2 Beta-ketoacyl-coa synthase family protein | 1719 | 2e-189 |
| B9RQZ8 Acyltransferase, putative | 1708 | 3e-188 |
| Q8S2R3 Putative beta-ketoacyl-CoA synthase | 1675 | 2e-184 |
| A7X6P9 Fiddlehead-like protein | 1667 | 2e-183 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G26250.1 KCS10 (3-KETOACYL-COA SYNTHASE 10); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups | 2664 | 3e-301 |
| AT1G19440.1 KCS4 (3-KETOACYL-COA SYNTHASE 4); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups | 1114 | 1e-121 |
| AT2G26640.1 KCS11 (3-KETOACYL-COA SYNTHASE 11); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups | 1063 | 1e-115 |
| AT2G16280.1 KCS9 (3-KETOACYL-COA SYNTHASE 9); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups | 1053 | 2e-114 |
| AT1G04220.1 KCS2 (3-KETOACYL-COA SYNTHASE 2); fatty acid elongase | 1022 | 6e-111 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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