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Information for unigene UN13728
| FASTA Sequence |
| Unigene ID: UN13728 | Length: 1748 |
| SNP | CGAGAGAACATAACAGAAGATCCCATTAGTGGAATTCGAAAGAGACAACGAAACATCATTATTACTGAAGTAGTCCAAACAAAACA
TTCATTCACGCCTACAACTTCCAAAGACCATTGTCTTTCTTCAAAACACGATTACATTGAAAGAGACTGATAACATTTCAAACCCT
TCACTCAGTTGGACTGACGGAGCTCTGGTCGAACGAAATCTGCATCTTGAGGCACTGAGATATCCACGGTGGGCCTGAGCTCCGCA
CAGACCTGGATAGCACCATGGACTGGATCAGCGAAGAAGTTGCTGATCAAGTCTTTGTTGATTGGTGCACCATTGTCCACAGCCAC
CAAAGCTTGTTGTGTCAGGTTGTAGTCAAACCGTGGTGCCCATTTCCTCGATCCCAATCTTGCTGTGGTCGAGCAGTTGTCCACCA
TGAAGGACACTCCTCTAGCGTGCATAAACGGGTTCAGAGAATCAACAGACTCAATCACACTCTCGTTGATGATCTCCGAGTAGGAG
TGACCCTTCTTCCTCAAGATCTCAATCTGAGCCATCATAAGAGCAACGTAAACTCCAGCGGTGAAGGGATACAAGGGACCCAAGTC
ACCAGCTGGTCTGGACTTCCTGACGCGTTCACCGACCTTCCACATTCTTGTCTGATCAATCTTTCCCATTGGGAATGCAGGTAAGC
CCTCCTTATCGTAGAAGCGACGACCGGCTAAGACAACGCTCCTGATTTCGCTGCCAGCTGCTACATCCTCGTAACATTCGTAGAGG
ATCTCCATACAAGGGTAGAAGGATGCACTGTATGCAGTCTCGAAGTCCTTTTTGCCTTCTTCAGACAAGGAGTTGTAGACAGCCAA
CATTCCCTGGGTAGAGATAGTTCTCGAGATATTTCCTGTGATGCACTCTACAGTGTTCTTGTAAGCCAAGTCTTCACTCATTCCAT
TTTCGGTGTACCTTCTGAACAGAGACTCCACGATTCCGTGGACAGCGCCAAGCAAAATGCCTCTTTCTCCAAAGATGTCACTCTTG
TACTCTTGCTCAAGAGTAGTAGCAAAAGTAAAAGGGGAACCAAGTGCTACTGACCATCCCAGAGCAACATCAGCGGCTCTACCGTC
AACATCCTGGTGGACTGCAAAACTGGCGTTGATTCCAGCACCGTTGATTTCTTTTCCCTGGACATAAAGCCTTCTAACAGATGGAC
CCATTCCCTTAGGGCAAACAGCTACCACGCTGATGTTCTTTGGGAAATCAAGTCCCATGGACTGCAAATGCCCCAGTAGAAACCCG
TGTGACAAACCGAGAATGCTGTTTGGCTTCATGTGGGAGAATATTTTCTCATAGTTATCAGCCTGAGCAGCATCAGAGATCAAAAG
TAGCACAAGATCGCCGCCAGAGATAGTTTCCCATATATCACCCAGCGTACCACTTTCTTCGGTGAAGTCAACAGCACGTGCCTCCT
CAAATGAGCGAGAGCCCTTTCTAAGCCCAATCTTAACAACAATGTCAGACTTTGCCTCCACAAGCGAATCCCTTAAATTCTGAGCT
TGAGCAGGTCCCTGAGAACCCCAGCCAATGACACCAATCTGCTTAATCCCTTTGAAAGCATCAGGAAGATGCTTGAACAAGTCCCT
TCCTCCCCTCACAATGTACTCTTCATGACCAGCAAGAGACACTTTCTCCTTTTTGAACACAGACGTCTCGAAATCCAGAGACATAG
GGGCTCTAACCGCAGAGGACGCAACCAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_191420 ketol-acid reductoisomerase [Arabidopsis thaliana] | 2570 | 5e-288 |
| BAH20088 AT3G58610 [Arabidopsis thaliana] | 2563 | 3e-287 |
| XP_002876470 ketol-acid reductoisomerase [Arabidopsis lyrata subsp. lyrata] | 2563 | 3e-287 |
| CAA48253 ketol-acid reductoisomerase [Arabidopsis thaliana] | 2561 | 6e-287 |
| ACF17638 putative ketol-acid reductoisomerase [Capsicum annuum] | 2475 | 5e-277 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q05758 Ketol-acid reductoisomerase, chloroplastic | 2570 | 2e-289 |
| O82043 Ketol-acid reductoisomerase, chloroplastic | 2435 | 1e-273 |
| Q65XK0 Ketol-acid reductoisomerase, chloroplastic | 2381 | 2e-267 |
| Q01292 Ketol-acid reductoisomerase, chloroplastic | 2369 | 4e-266 |
| P38674 Ketol-acid reductoisomerase, mitochondrial | 432 | 2e-041 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DH71 AT3G58610 protein | 2563 | 2e-287 |
| B5LAT1 Putative ketol-acid reductoisomerase | 2475 | 4e-277 |
| B9N3F9 Predicted protein | 2469 | 2e-276 |
| B9H2U7 Predicted protein | 2463 | 9e-276 |
| B9SGJ6 Ketol-acid reductoisomerase, chloroplast, putative | 2454 | 1e-274 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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