 |
Information for unigene UN13820
| FASTA Sequence |
| Unigene ID: UN13820 | Length: 1250 |
| SNP | GGAGATTGAGAAGATTAGTCACTGAAACAACACCAAGGAAAAAACATATGGAGCACCGAAAGATAAGAGGTAACGGCGTAGACATC
CACGTGGCGATCCAAGGCCCTTCCGATGGCCCTGTAGTCCTCCTCATCCATGGATTCCCTACTCTTTGGTACTCATGGCGTCACCA
GATCCCCGGACTCGCTGCTCTCGGATACCGCGCCGTCGCTCCTGACTTACGCGGTTACGGTGACTCCGACGCTCCGCCTGAGATCT
CTTCCTACACTTGCTTCCACATGGTTGGTGACCTGATCGCTGTCATATCCGCCTTAACCGAAGATAAAGTGTTTGTGGTTGGACAT
GATTGGGGAGCTCTGATCGCTTGGTATCTTTGTCTTTTCCGACCAGATAAAGTCAAAGCTCTGGTCAACCTCTCTGTTCCTTTCTC
TTTTGGTCCTAAAGATTCTACCGTTAAACCTCTTGACGCGCTGCGTAAGTTCTATGGCGACGATTTCTACATGTGCAGGTTTCAGG
AAGCGGGAGAAATAGAAGCTGAGATTGCAGAGGTTGGGGTTGAGAGAGTAGTGAGGAAGATACTCACATATAGAACACCTCGACCG
CTTATTTTGCCCAAGGATAAAAGCTTTTGGGGACCTAAAGACGAAACTATTCCTTTACCGTCATGGCTAACGGAGGAAGATGTTGC
TTACTATGTTAGCAAGTTTCAAGAGAAAGGTTACACTGGTGGAGTTAATTACTACCGCAATTTTGACCTAAACAATGAGCTGTTGG
GTCCATGGGTAGGATGCAAAATCCAGGTACCTACAAAATTTGTGATTGGGGACCAGGATCTGGTCTACTATTTTCCGGGTGCGAAG
GAATACATACATGGTCCCAAGTTCAAGGAAGATGTTCCTTTGCTCGAAGAGCCTGTGGTCATGGAGGGGGTTGCTCACTTCATTAA
CCAAGAGAAGCCACAAGAGATCCTCCAAATTATCGTTGACTTCATCTCCAAATTCTAGTCTTGCTTTCCTCAAGCCACCTTGTAAG
TTCCATACCTGAAGAGCATATATGCTTAATAAGTTGAACAATGAGGGTTATGGTTATATGTATTATAAAGTTGTTGTGTACGTTTT
ACGGAAGTTTTTTTTTCTAAAGACCCGTTATAAAAATATTTCTGTTCAACGTTGTTGTTGGTTAGAAAGGCTGTTTCGTTATGTCC
TTTAATCCTTAAGTTACGTGGAAATATTCTTGGATATCTCGTTAAA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAD30841 soluble epoxide hydrolase [Brassica napus] | 1630 | 3e-179 |
| NP_180242 soluble epoxide hydrolase [Arabidopsis thaliana] | 1484 | 3e-162 |
| XP_002880830 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1474 | 4e-161 |
| NP_180243 alpha/beta-dydrolases-like protein [Arabidopsis thaliana] | 1426 | 2e-155 |
| XP_002880829 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1181 | 4e-127 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P34913 Epoxide hydrolase 2 | 421 | 2e-040 |
| Q6Q2C2 Epoxide hydrolase 2 | 421 | 2e-040 |
| P80299 Epoxide hydrolase 2 | 398 | 1e-037 |
| P34914 Epoxide hydrolase 2 | 393 | 4e-037 |
| O31581 AB hydrolase superfamily protein yfhM | 327 | 2e-029 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L5G6 Soluble epoxide hydrolase | 1630 | 2e-179 |
| Q42566 ATsEH | 1484 | 2e-162 |
| O48789 Putative epoxide hydrolase | 1426 | 1e-155 |
| B9RT84 Epoxide hydrolase, putative | 1091 | 7e-117 |
| B9RFD7 Epoxide hydrolase, putative | 1016 | 4e-108 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G26740.1 ATSEH (Arabidopsis thaliana soluble epoxide hydrolase); epoxide hydrolase | 1485 | 8e-165 |
| AT2G26750.1 epoxide hydrolase, putative | 1427 | 4e-158 |
| AT3G05600.1 epoxide hydrolase, putative | 985 | 8e-107 |
| AT4G02340.1 epoxide hydrolase, putative | 983 | 1e-106 |
| AT4G15960.1 catalytic/ epoxide hydrolase | 977 | 7e-106 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
