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Information for unigene UN13917
| FASTA Sequence |
| Unigene ID: UN13917 | Length: 1388 |
| SNP | AACAAGTCAAAGGAAACCTTTTGTTACTTGTATAACTTCTTACATAAGTCTTTGTGAAAAGATGTTTGAAAATCTAAAAAAGAGCA
AAAAAGGTGAAGGGAATGATGATCATTGGAAACAAGAATTGTTTTCCTTCTCTTTGTTTCCATACATATAAAATACACACACATTC
ATGTGTATACATATTTCTCCTCTCGCCCTTCTTTCTCCACATTTTGCTTCATTCTGCATGGCTTTTATTAACCTCTCCCTCACTAC
TCTTCGATTCCTCCTCACTACTCTTTGATGATTCATCAAACGCCATCAACGGTTTGATGTCACCGTTCCAAATGCAGTGAGAAGCC
AGGAACCCAATGACGGCTGGGACAATGTATAACAAAGCAGGCTGTGCTGCTTGAAACCAGTTCATGACTACAATAGTGAGGACAAC
TCCAGCAACGTAACCCACAAACGCACTTGTGAAGTACTGTGGTTTACTGCGTCTTGACACATCGAATCTTAGAGCCAACGCAACAA
AAATACCCGGAATGACAATATCACCAAGCCCTAGCATAGAGTATGGCCTTAGAGCATCCCCCGTAGGGAACAAAAGCTTTATCGGA
GCATCAAAGGATTTGGCAACACTAACCATAACTGGGGTAAAGAAAACCCAGAAAATATCATAGAAAAACAGTCCTACCAAAAGGAT
GGCACCAGTCTTGAATGATCCAAGAGAGAGCATCTCAATTCCCTGAATGCAGAAGGAGAGGCCAAGGATATTGTTAGCCAGCCAAT
GTTTCTTCCAAGCGTACCACGCGCAGAAGAAGGTTCCAGGGATTCCCGCAACAACTTGGGACTTTGTGAACTCTACCTCCAAAGAT
TTGAAATAAGGAAAACGCCAGACGATAAGATTGTCATTCCATGGTTTTGGCAGAAACCTGCTGATGGCAGGTAACAATGTCGCCGA
AAGAGCGACGATGCCAAGAACAAAGAAGTAAGCAGTGAGCACAGCATTGACCAAGTCCTTAGAGAGAAACTTGAACAACAAGAAAA
GAGAGAGAAGCATAGCACTCCCAACCAATGGGAAACGCATGGCATGCTCTTTCGACATCGTCTCCGTTGGAGGAGAATCCTTCACG
GAACGAAAGCAACCGACGTAAACTGTAAGACATGCCGTAAGAACAACATTCAAGTTCGGGTTCACATTCACAACAAGTGGTGCCAC
CGTCAAACCTGCGAGAGCGAGATTGGCGATTCTCTCACAATTCTTCATGATTGAATCTTTGTGTCTCTGTAAAAAACTGATGAATG
TATAGAGAGAGAGCGATCCAGTGGGGTCAAGTGATAAAAATTTCCACCAGATCTGTTAAAATACTAATTTTTTTTTTTTCTTAGAG
AAAAGGGATCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565294 minor histocompatibility antigen H13 [Arabidopsis thaliana] | 1651 | 1e-181 |
| AAM65222 unknown [Arabidopsis thaliana] | 1647 | 4e-181 |
| XP_002875188 signal peptide peptidase family protein [Arabidopsis lyrata subsp. lyrata] | 1641 | 2e-180 |
| XP_002313995 predicted protein [Populus trichocarpa] | 1467 | 3e-160 |
| XP_002527044 Minor histocompatibility antigen H13, putative [Ricinus communis] | 1460 | 2e-159 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9D8V0 Minor histocompatibility antigen H13 | 645 | 3e-066 |
| Q8TCT9 Minor histocompatibility antigen H13 | 638 | 2e-065 |
| Q9UTA3 Probable intramembrane protease C25B8.17 | 350 | 4e-032 |
| P49049 Intramembrane protease 2 | 327 | 2e-029 |
| P34248 Probable intramembrane protease YKL100C | 221 | 4e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O81062 Expressed protein | 1651 | 1e-181 |
| Q8LAP9 Putative uncharacterized protein | 1647 | 3e-181 |
| A9PGG2 Predicted protein | 1467 | 2e-160 |
| B9SM25 Minor histocompatibility antigen H13, putative | 1460 | 1e-159 |
| C6T9X4 Putative uncharacterized protein | 1458 | 2e-159 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G03120.1 ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE); aspartic-type endopeptidase | 1652 | 4e-184 |
| AT1G01650.1 aspartic-type endopeptidase/ peptidase | 250 | 2e-021 |
| AT1G01650.2 aspartic-type endopeptidase/ peptidase | 250 | 2e-021 |
| AT1G63690.1 protease-associated (PA) domain-containing protein | 243 | 1e-020 |
| AT1G05820.1 aspartic-type endopeptidase/ peptidase | 233 | 1e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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