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Information for unigene UN13962

FASTA Sequence
Unigene ID: UN13962Length: 840  SNP
GGAGAGTTGCATTGCACATACATACGTAGAGAGATTAAAAACAAACGTACCGGGAATAGTAGAAAGAAGAACAAGAAAGAGATCGA
AACAATGTCGTGGCAAACTTACGTTGATGAGCACTTAATGTGCGATGTCGGTGACGGCCAAGGTCACCACCTCACCGCTGCCGCCA
TCATCGGCCATGACGGTAGCGTTTGGGCTCAGAGCGCTAATTTTCCTCAGTTCAAGCCTCAAGAGATGACAGATATCATGAAAGAT
TTCGATGAGCCGGGTCACCTTGCTCCCACTGGTATGTTTCTTGCAGGACTAAAGTATATGGTCATCCAAGGCGAGCCTGGTGCAGT
CATCCGTGGCAAGAAGGGAGCTGGAGGAATAACGATCAAGAAAACAGGACAATCAATGGTGTTTGGTTTGTACGAAGAACCGGTGA
CTCCAGGACAATGTAACATGGTCGTCGAGAGGTTGGGTGATTACTTGATCGAACAGGACCTCTGAGCTTTCTAGAATGCTCCATTG
CTGTTATTCAAATCCTTTAAACTATTGTTTCACCTTTGTTTTTCTTTTGGTTGGGTGCATGGGTTTCTTTTTTTTTACTAATTTAA
TTTTGGTATTTCTGGTTTCTACTTAGCAAAGTTTAAAACAAGCCTAAGGTTGCAGATAATAACACAAAAGAAGAAACCTTCATCTT
TTTCTTGTTTTTTTCATTAATTTTTTTATTTTTATTTAATTTTATTTACATTAAGGGCATTTTAATTCTATTACTACGTATTATCT
TTTTAAATCTTATTAAACATATACAGCCATTTATATGTACTAATATTATATATTAAGAAACTTTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179567 profilin 5 [Arabidopsis thaliana]7001e-071
ABK28500 unknown [Arabidopsis thaliana]7001e-071
XP_002883972 hypothetical protein ARALYDRAFT_480492 [Arabidopsis lyrata subsp. lyrata]6973e-071
ABW17183 profilin [Raphanus sativus]6857e-070
ABP35953 profillin [Brassica rapa]6812e-069

Swiss-Prot top hits (Blast detail)Scoree value
Q38905 Profilin-47006e-073
Q38904 Profilin-36763e-070
Q9FUB8 Profilin6738e-070
O49894 Profilin6111e-062
O24170 Profilin-25993e-061

TrEMBL top hits (Blast detail)Scoree value
A0MEN1 Profilin (Fragment)7009e-072
Q1PF40 Profilin7009e-072
A8IJ88 Profilin6855e-070
A8IJB2 Profilin6855e-070
A4ZX86 Profilin6811e-069

Arabidopsis top hits (Blast detail)Scoree value
AT2G19770.1 PRF5 (PROFILIN5); actin binding / actin monomer binding7014e-074
AT4G29340.1 PRF4 (PROFILIN 4); actin binding6772e-071
AT2G19760.1 PRF1 (PROFILIN 1); actin binding5455e-056
AT5G56600.1 PRF3 (PROFILIN 3); actin binding5349e-055
AT4G29350.1 PFN2 (PROFILIN 2); actin binding / protein binding5195e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  25%
 
83  19%
 
62  13%
 
74  25%
 
103  19%

Unigene MembersMember information