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Information for unigene UN14060

FASTA Sequence
Unigene ID: UN14060Length: 1121  SNP
GGGAGATACACCATGGATAAGATAACGACATTGCTCTTTCCCTTGTTCACTCTCCTCCTCACGACATCTTTGTCTAAAGATCTCTG
TCACAAAGATGACGAAAACACCCTCCTCAAGATCAAGAAATCCCTTAACAACCCTTACACCATCATCTCCTGGGATCCCAAAGACG
ACTGCTGTACCTGGGTCTCCGTTGAGTGCGGTGACTCTACTGTTAACCACCGTGTCATCTCCCTATATATATCAGACGACGATGTC
TCCGCTCAGATCCCTCCTGAAGTAGGTGACTTATCGTATCTACAAACCCTTATATTCCGCAAACTCCCTAACCTCACCGGTGAAAT
CCAACCTACCATCGCCAAGCTCAAGTATCTTCGTTTTCTCTGGCTCAGCTGGACCAACCTGACCGGTCCGGTTCCTGAATTTTTGA
GTCAGCTCAAGGATCTAGAGTACATTAACCTTTCCTTCAATGACCTCTCTGGTTCCATACCCGGTTCTCTCTCTTTGTTACCTAAA
CTCAGGATTCTTGAACTAAGCAGGAACAAGGTTACAGGTTCAATACCAGAGTCATTTGGATCGTTTAAAGGAGTGTTACCTCCTGC
TTTTTCTATCGCACAACAAGCTATCAGGTTCGATACCAAAATCACTAGGCAACCTGGATTTTTACCGGATTGATTTCTCCCGTAAC
AAGCTAGAAGGTGATGCTTCAATGATGTTTGGAGACAAAAAGACGTCATGGTCCATTGATTTATCGAGAAACAAGTTCCAGTTTGA
TATTTCCAAGGTTAATGTGGCTACGACAGTTAATAACTTAGACTTGAATCACAATAGGATCACAGGGAGTATCCCGGTTCAATGGA
CCGAGCTTACTCTTCAGTCTTTCAATGTTAGCTATAACAAACTTTGTGGACGCATCCCCCAGGGAGGTGACCTTCAGAGATTTGAT
GCTTACGCATATTTACACAACAAGTGCCTATGTGATGCACCTCTTCCGAGTTGCAACGTGAAGATTCAAGCAACCGATCTTTATTT
AAACTTACCATCAGAATAAAATCATGCATAATGACATCTGTATGTTATATTCAAAATGATTAATAAAAACGAATAAATTTTAATTA
AAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABC25452 pollen development related protein [Brassica rapa subsp. chinensis]9475e-100
ABX46561 polygalacturonase inhibitor protein 15 [Brassica napus]9385e-099
AEL89177 polygalacturonase inhibiting protein [Brassica oleracea var. italica]8632e-090
ABX46556 polygalacturonase inhibitor protein 10 [Brassica napus]8552e-089
ACP28176 polygalacturonase-inhibiting protein 3 [Brassica rapa subsp. pekinensis]8481e-088

Swiss-Prot top hits (Blast detail)Scoree value
Q9M5J8 Polygalacturonase inhibitor 27724e-081
Q9M5J9 Polygalacturonase inhibitor 17195e-075
A7PW81 Polygalacturonase inhibitor5332e-053
Q05091 Polygalacturonase inhibitor5082e-050
P35334 Polygalacturonase inhibitor 13782e-035

TrEMBL top hits (Blast detail)Scoree value
Q2PYN9 Pollen development related protein9473e-100
A9YBZ6 Polygalacturonase inhibitor protein 159383e-099
A9YBZ1 Polygalacturonase inhibitor protein 108551e-089
C3VX44 Polygalacturonase-inhibiting protein 38489e-089
A9YBZ4 Polygalacturonase inhibitor protein 138452e-088

Arabidopsis top hits (Blast detail)Scoree value
AT5G06870.1 PGIP2 (POLYGALACTURONASE INHIBITING PROTEIN 2); protein binding7723e-082
AT5G06860.1 PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); protein binding7195e-076
AT3G12145.1 FLR1; enzyme inhibitor/ transcription factor binding4614e-046
AT1G34110.1 leucine-rich repeat transmembrane protein kinase, putative2671e-023
AT2G26380.1 disease resistance protein-related / LRR protein-related2608e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
714  19%
 
1011  15%
 
1116  21%
 
65  7%
 
810  13%
 
95  7%
 
1214  19%

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