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Information for unigene UN14068
| FASTA Sequence |
| Unigene ID: UN14068 | Length: 705 |
| SNP | GGGCCATTTCAACAAAGCAACACCAATCAGAAGAAGAGTGTCATCATCTTTCTTTCAGACAATGGCTTCCACTGCTCTCTCCAGCG
CCATCGTAAGCACATCATTCCTCCGCCGCAAGCAGACACCAACCAGCCTCAGATCTCTCCCGGCGGGCAACACACAATCCCTCTTC
GGCCTCAAATCCTCCTCCTTCACCGCTCGCGTCACAGCCATGGCTGCCTACAAGGTCAAGTTCATCACACCTGATGGAGATAAGGA
AGTGGAGTGCGACGAAAGCGAATACGTCCTCGACGCGGCGGAGGAGTCAGGAATCGATTTGCCGTACTCGTGCCGTGCGGGAGCCT
GCTCGAGCTGCGCCGGGAAAGTAGTCTCCGGCTCGGTTGACCAGTCGGACCAGAGCTTCTTAGACGATGACCAGGTCGCCGATGGG
TTTGTTCTCACGTGCATCGCTCGTCCAACTTCTGATGTCGTTATTCGAACCCACCAAGAAGAAGCCATGGCTTAAATAACTCAAAA
AGTATTTCACTTTCTATCGTATCATCACACTAGAGAGAATATGTTGATGATGTAATAAGAAAGAATAAGACTCATGTCAATTCTTT
TTCGATACTCTGTTTCAGTGTTACAGTATTTTAACGTGGATGTCAAGTAATTACAACTTAAGAAAGCTTCAATCACACCATTATAA
ATTTATATTTCTTCACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172565 ferredoxin [Arabidopsis thaliana] | 599 | 4e-060 |
| XP_002889843 hypothetical protein ARALYDRAFT_471234 [Arabidopsis lyrata subsp. lyrata] | 597 | 8e-060 |
| BAJ33728 unnamed protein product [Thellungiella halophila] | 585 | 2e-058 |
| NP_176291 ferredoxin-2 [Arabidopsis thaliana] | 572 | 6e-057 |
| XP_002888117 fed A [Arabidopsis lyrata subsp. lyrata] | 570 | 1e-056 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04090 Ferredoxin-1, chloroplastic | 599 | 2e-061 |
| P16972 Ferredoxin-2, chloroplastic | 572 | 3e-058 |
| O04683 Ferredoxin-1, chloroplastic | 457 | 6e-045 |
| Q43517 Ferredoxin-1, chloroplastic | 423 | 5e-041 |
| P14938 Ferredoxin, leaf L-A | 421 | 9e-041 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q7M1S3 Ferredoxin C | 480 | 2e-046 |
| C0PRC9 Putative uncharacterized protein | 443 | 4e-042 |
| A9NTB7 Putative uncharacterized protein | 440 | 8e-042 |
| Q6Q8B8 Chloroplast ferredoxin I | 440 | 8e-042 |
| A3QN28 Chloroplast Tsip1-interacting ferredoxin | 439 | 1e-041 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G10960.1 ATFD1 (FERREDOXIN 1); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | 599 | 2e-062 |
| AT1G60950.1 FED A; 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | 572 | 3e-059 |
| AT2G27510.1 ATFD3 (ferredoxin 3); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | 362 | 6e-035 |
| AT5G10000.1 ATFD4 (ferredoxin 4); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | 280 | 2e-025 |
| AT4G14890.1 ferredoxin family protein | 184 | 3e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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