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Information for unigene UN14075
| FASTA Sequence |
| Unigene ID: UN14075 | Length: 1348 |
| SNP | GGAGGCTCGGTAGGACTTAGGTTCCTGCTGCAATGCTTTTAGAACAGAAACTGAGCATTCGCCGGAGATAACTATCACCACCACAT
AGAGCTATATCAATGGCGGAACCTAGGAAGCTGAGAGGCCACAAAGCGACTGCCACGTGTTGCATAGCTTCTCTTGACCGGCCTGG
ACTTGTTGTCACTTCCGGCGAGGATGGTTGCATTTGCTGGTTTGATTTGCGATGTAAAGATGTCCAGTTCACCATTGACGTTGGGA
CAGAACCAGTTCCATCTCTTTGTTTCAAGACAGGTAACGAGGACGTTCTCTATGCTTCTCATGGAAACGAAATCAAGTCTTTCGAT
GTTCATACGCTGAGTGCTGGTTCTTGGAAGCCATTAGAGAGTTACAGTTACAACAAAGATGAAGTTAACCAGGTAGTATGCAACGG
AAGATCGTCTTTTCTTGCTTCTGCTGATGATTCTGGTGATGTCAAGATTATCGACCTTGGTCAGAAGTGTCTTTATAAAACCCTTA
GAGCTGGTCATACAAGCATATGCAGTTCTGTGCAGTTCATTCCATGGAGACCTTGGGAAGTTATTACCGGTGGACTTGATTCAAAG
CTTGTTTTGTGGGATTTCTCAAAAGGTCGCTCGCAAAAGATTATAGACTTCAGCTCTGATACACATAGTAGCTCAGGACAATGTTT
AAACCCTGCGTTTGTTCACTCGATAGCAGTTCCGGAAATGGACATGGTTGATAAGTTAGGCAAGATATGCGCTGTTGCTAGAGGTG
ATGGGATTGTCGATTTGATCAATGTGGAATCAGAGCTTTCGAGAAAAGGAGCATCAAAAGGAAGCAGCAGCAGCAGTAGTAACAAC
AATGTGGTCAAAAGGGTTTGTTTAGATTACTCTGTTGGTGGACACAAGGCTGCTGTTTCTTGTGTAGCGTTTTCTCAGTTTCAGGG
AAAAGGTGGATTCTTGATCTCAGGTGGTAATGATAAGACAGTTAAAATCTGGGATTGCGTTAGATGTCTTGATTCAGACAAGAATA
ACGATAACAGAGATCTCCTCCTCCATTTGAATATTGACCTGAACAAGAAGGTGAATTGGCTATGCACGAATCAGTCTGATTCTGAG
AATCTTGTGGTCTGTGATACAACAAGAGTAGTCAAGGTTTACTCAATCTCTTGAGTCTTTGACTTTATTGGCTCTTACTGTTCACT
TTGTTACTAGGCTTTATGGGGCCTCTATGAATAGACTCAAGTGGTTGCTTGATCCACAAGTTTGTTATTTTGTTACTTAAAACTGG
TAAAAGTTTTACTCTACTATGCTGTAGTATGAGTATATAAGCATCACAAGACTTCTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002865226 transducin family protein [Arabidopsis lyrata subsp. lyrata] | 1690 | 4e-186 |
| NP_568648 transducin/WD40 domain-containing protein [Arabidopsis thaliana] | 1687 | 9e-186 |
| AAM67274 unknown [Arabidopsis thaliana] | 1684 | 2e-185 |
| CBI30713 unnamed protein product [Vitis vinifera] | 1341 | 1e-145 |
| XP_002522238 wd40 protein, putative [Ricinus communis] | 1237 | 1e-133 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q7Z5U6 WD repeat-containing protein 53 | 327 | 2e-029 |
| Q32KQ2 WD repeat-containing protein 53 | 315 | 5e-028 |
| Q9DB94 WD repeat-containing protein 53 | 302 | 2e-026 |
| Q54BI5 WD repeat-containing protein 53 homolog | 220 | 5e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LGD6 Putative uncharacterized protein | 1684 | 1e-185 |
| B9S8B9 Wd40 protein, putative | 1237 | 1e-133 |
| B2ZAU2 Putative G-protein B | 1165 | 2e-125 |
| B2ZAS8 Putative G-protein beta | 1144 | 6e-123 |
| B9I1I3 Predicted protein | 1045 | 2e-111 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G45760.1 transducin family protein / WD-40 repeat family protein | 1692 | 9e-189 |
| AT5G45760.2 transducin family protein / WD-40 repeat family protein | 810 | 2e-086 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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