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Information for unigene UN14173

FASTA Sequence
Unigene ID: UN14173Length: 1831  SNP
GCGATTACTCTTGCGAGTCTAGCCGAGATTCTAGCTTTTGCTGTTGGTGCATATTAAGATGCCAGCTGTTCGAGTGTTCTCCTTGT
TTGCTGCATTGGCTGTCCTTTTGGACTTCATTCTCCAGATTACTGCTTTTGTTGCCTTGATAGTATTTGACTTCCGAAGGACTGAG
GATAAGCGAGTTGATTGCTTCCCATGTATTAAGAGACCACAATCATCAGATGGTGATAACAAAGGGGTAGGTCAGAAAAAACCTGG
ACCTTTGACTCGATATATGAAGGAAGTCCATGCACCCATTCTCAGCCATTGGGCAGTTAAAATAGTGGTTATTGCCTTCTTCTTTG
GCTTAGCTATGGCTGGAATCGCATTGTCCACTCGGATTGAGCCTGGTTTGGAGCAACAGATTGTTCTTCCTCAGGACTCGTATCTT
CATGATTACTTCAATAATATTGAAACATATCTTCGAATAGGTCCACCTCTTTACTTTGTTCTGAAGAATTATAACTACAGCTCGGA
ATCAAGCCAGACAAATCAACTTTGTTCCATTAACAAGTGTGATTCTAATTCTCTTATGAACGAGATTGCAAAGGCTTCTTTGACCC
CAGAACTAAGCTACATAGCTAAGCCAGCTGCTTCATGGGTCGATGACTTTCTTGTGTGGTTATCTCCCGAGGCATTTGGCTGCTGC
CGGAAGTTTACAAATGGTACCTTTTGTCCCCCTGATGACCAGCCTCCTTGTTGCCCTGCTGATCAAGGGAGCTGTGGCCTAAGTGA
AGTTTGCAAAGACTGCACAACGTGCTTTCGTCATGCAGATTTAAGTAGTGACCGCCCATCCACAGTCCAATTCAGAGAGAAGCTTC
CTTGGTTCCTTAGCGCACTTCCTTCTGCTGATTGTGCTAAAGGTGGCCATGGTGCTTATTCTACTAGTGTTGATTTGCAAGGATAT
AAAAATGGTATCATCCAAGCTTCATCGTTCCGCACTTATCACACACCTCTTAACAAGCAGGCTGACTTTGTTAATTCAATGAGAGC
GGCTCAAGAGTTTAGTTCCAAAGTTTCTCGTTCTTTAAAGATGGAGATATATCCATACTCAGTGTTCTATATGTTCTTTGAGCAAT
ATCTCGACATATGGAAAACTGCATTAATCAACCTCTCCATTGCCATCGCTGCCGTCTTTGCGGTGTGTTTAATCATCACATGCAGT
TTTTGGAGCTCTGCTATTATCCTGCTGGTGATTGCAATGCTCATCATTGATCTCCTGGGAGTAATGGCAGTCTTTCATATCCAGCT
AAACGCACTATCTGTTGTAAATCTAATCATGTCAGTGGGCATAGCGGTTGAGTTCTGTGTACACATAACACATGCTTTCTCGACAA
GCTCTGGGAACAGGAACCAAAGGATGAAAGAGGCGCTTGGTGGGATGGGAGCTTCAGTTTTCAGTGGAATTACATTGACAAAGCTA
GTTGGAGTGATTGTGCTTGGCTTCTCAAAATCGGAAGTGTTTGTGGTCTACTACTTCAAGATGTATTTGGCACTAGTCCTCCTCGG
TTTCTTGCACGGCCTTGTATTCTTACCGGTGTTCTTGAGCATGTTTGGCCCAGCTCCAAGACATGTAGCAGGGGATAATAAGCAAG
ATCCTCAACCTTCGGTTTCATCGCTGCCGTAGAGGCTCAATTAGGGGTTTTTGATTCTTTATTTACAAAGGTTTTGTTTTGGATAC
ATCTTCTATTTGTAAATGGTTAAAGATTTGTTTCACCCATAGCCACATAGAAAAGCTAAGTTCAGTGCGTAGCAGAAATTTTTTAA
TAAGAGAATCACATTAGGACGTGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CBI40718 unnamed protein product [Vitis vinifera]22193e-247
XP_002279611 PREDICTED: hypothetical protein [Vitis vinifera]21639e-241
CBI37746 unnamed protein product [Vitis vinifera]21639e-241
XP_002312804 cholesterol transport protein [Populus trichocarpa]21566e-240
XP_002891239 predicted protein [Arabidopsis lyrata subsp. lyrata]21557e-240

Swiss-Prot top hits (Blast detail)Scoree value
O15118 Niemann-Pick C1 protein10155e-109
O35604 Niemann-Pick C1 protein10146e-109
Q6T3U3 Niemann-Pick C1-like protein 19431e-100
Q6T3U4 Niemann-Pick C1-like protein 19332e-099
Q9UHC9 Niemann-Pick C1-like protein 19294e-099

TrEMBL top hits (Blast detail)Scoree value
B9HPX9 Cholesterol transport protein21564e-240
B9SMD3 Putative uncharacterized protein21304e-237
Q9C8F0 Putative uncharacterized protein T8D8.3 (Fragment)18787e-208
B9FBZ9 Putative uncharacterized protein16592e-182
Q7XUB7 OSJNBb0078D11.11 protein16592e-182

Arabidopsis top hits (Blast detail)Scoree value
AT1G42470.1 patched family protein21275e-239
AT4G38350.1 hedgehog receptor20201e-226

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  10%
 
114  20%
 
73  15%
 
85  25%
 
93  15%
 
122  10%
 
61  5%

Unigene MembersMember information