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Information for unigene UN14176
FASTA Sequence |
Unigene ID: UN14176 | Length: 924 |
SSR | SNP | GGTTGCTTCTTCTGCTACGGTGATTGCTGGCTCTGTTACTTCTTATTATTGGGCTCAAGGGGAAGCAGCAGCAGCAGCGTCGCCGG
AGATACCTTTTCTTCCTGTTTTCGCCTCGATGAAGCGGCTTGCACGCTACAACTTAGGATCTGTGGCTCTTGGTTCGCTCGTTGTC
TCTTTTGTGGAGTCTGTTCGGTTCATTCTCGAGGCTATTCGTCGTAGAACGAAAGTAAGAGGGAGTACACCTGATCACTGGCTTGG
GAGAATGGGTCATTACACATCGCGTGGGTGTCTCAAAAGCGTTGAGTGGACTATTAAATCGGTTAACCGCAATGCCTACATAATGA
TTGCTATAACAGGGAAAAGCTTCTGTAAATCATCTGCAATCGCAACAGAGCTGATCATAAACAACATTATGAGGATAGGCAAGGTT
AATGTAATAGGAGATGTTATATTGTTTCTAGGGAAGCTTTGTGTGAGTCTCTTCAGTGCTCTCTTTGGCTTTCTCATGTTGGATTC
TCACAAGTATCGGTCTTCTCACAACAAAGTCTCCTCCCCTCTACTACCCGTTTTGGCATGTTGGGCTCTGGGGTATGTTGTGGCTA
CACTGTTCTTTGCGGTGGTTGAGATGTCGATAGACACAATCATACTCTCCTTCTGTCAAGACTCAGAGGAGAATCAAGGGAATGCT
CAGCACGCTCCATCACTTCTACTTGAAACTTTAGATAATAATGAGGAAGAGGTTCAGAGACTCACCCACTGATAGAGATCCTTACT
GTATAAGTTTTGTTTCTTTGGGGGTTGCCGGTTTATATTGGTTTTAAAGAATGGAATCTCTACTCTCTAAAAACATTATAAGCATA
TATTGTAATGTCAGATGGCTTTGAGGATTCTTCTATTCTGAAACCAAAATATTATATTTCTGCC
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GenBank top hits (Blast detail) | Score | e value |
XP_002882939 hypothetical protein ARALYDRAFT_478976 [Arabidopsis lyrata subsp. lyrata] | 1175 | 1e-126 |
BAB02367 unnamed protein product [Arabidopsis thaliana] | 1157 | 1e-124 |
NP_566511 Plasma-membrane choline transporter family protein [Arabidopsis thaliana] | 1157 | 1e-124 |
XP_002528555 conserved hypothetical protein [Ricinus communis] | 991 | 3e-105 |
XP_002316905 predicted protein [Populus trichocarpa] | 969 | 9e-103 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q54I48 Choline transporter-like protein 2 | 318 | 1e-028 |
Q91VA1 Choline transporter-like protein 4 | 315 | 3e-028 |
Q7T2B0 Choline transporter-like protein 4 | 314 | 4e-028 |
Q7SYC9 Choline transporter-like protein 2 | 311 | 8e-028 |
Q6MG71 Choline transporter-like protein 4 | 311 | 8e-028 |
TrEMBL top hits (Blast detail) | Score | e value |
Q94AN2 Putative uncharacterized protein At3g15380 | 1157 | 1e-124 |
Q9LUQ4 Genomic DNA, chromosome 3, P1 clone: MJK13 | 1157 | 1e-124 |
B9SRD6 Putative uncharacterized protein | 991 | 2e-105 |
B9HZW2 Predicted protein | 969 | 6e-103 |
A5C4A0 Putative uncharacterized protein | 961 | 5e-102 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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