 |
Information for unigene UN14194
| FASTA Sequence |
| Unigene ID: UN14194 | Length: 1020 |
| SNP | GATGATTTATTTATATATAACCAAAGTTCGACAGAATCATCGGTTCTTATGCAAATACATCTCAGGAATAAGAATGCTTAAATATT
GCTGGATAATTTATTATCCAATGCCATGAAAACTTCGATTATGAGCTCTCTAAGAACAGTAGTTTGCATTTCATAAGTACAATTTT
TGAAGTGTCCAAACATAAAGATAATGAAGCAATTTCATCTATGATGGGGGTATAATGATTGGTTGATTTCCTCCTAATCAGTATTC
ACTTTTTTTTTGACCGATCTTGTGTACGTTTCAATCCTTACGGGAGTTCCTTGTCTTCATCCACAAAGTAAGGATTGAATTGATTT
ATGACATGCTCGTAGACAGGTCTCTTGAAATATACAGCATGTTCAATCACTTGTTCGGGTAGCATCCAGGACCACACCTTAAACTC
TGGTTTTGCAGTACCATCTCCTAGGAGATTTATTTCTTCTTCCTTGCCAGTGAACTTGAAGAGAAACCATTTCTGAGCTTGGCCTT
TGTAACTTGTTCGCCATTTCCGATTCAGTTTGTCCTTCACATCCCGGGGGAAATCATAGGTCAGCCAGTTTGGTATCTCGGCAATG
AATTCAGCAGAGGTAACCCCTGTTTCTTCTCTGAGCTCTCTAAAAGCAGCATTTCTAAGATCTTCTCCCTCATCAGCACCACCCTG
AGGCATTTGCCATGTATCCGGAACGTGAATCTTTGATGCAGTAAAAATCTTTCTACATGGACTAACGAGACAAATCCCAACATTTT
TCCGGTAACCAACCGGCGGCGACTCAACTGTTCTCGCCGGCGGCGATAAAGCTACGGACCGAACCACCGGAGGCTTTGAGGCAGAG
AAGGGACGTTTCAGGTATGATAATTTGGAAGAGAACTCTACTCGAACGGAGGAGATTGTAGCTTTGCCGATGAATCCAGACGCCGT
AACGGCCATGGCGGCGGGAACTATTCTAATCTAAGGCTTCCTCTCCCCTCCCTCCTCCGCTTAGCGATATCTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABL97947 bis(5'-nucleosy1)-tetraphosphatase [Brassica rapa] | 1056 | 9e-113 |
| NP_196252 nudix hydrolase 27 [Arabidopsis thaliana] | 1004 | 1e-106 |
| XP_002871212 hypothetical protein ARALYDRAFT_487443 [Arabidopsis lyrata subsp. lyrata] | 998 | 5e-106 |
| XP_002532546 (Di)nucleoside polyphosphate hydrolase, putative [Ricinus communis] | 711 | 9e-073 |
| XP_002323390 predicted protein [Populus trichocarpa] | 648 | 2e-065 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FNH4 Nudix hydrolase 27, chloroplastic | 1004 | 4e-108 |
| Q9CAF2 Nudix hydrolase 26, chloroplastic | 590 | 4e-060 |
| Q9C6Z2 Nudix hydrolase 25 | 466 | 1e-045 |
| Q2RV14 RNA pyrophosphohydrolase | 349 | 4e-032 |
| Q13DN7 RNA pyrophosphohydrolase | 342 | 2e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A1YMY8 Bis(5'-nucleosy1)-tetraphosphatase | 1056 | 6e-113 |
| B9T2S7 (Di)nucleoside polyphosphate hydrolase, putative | 711 | 6e-073 |
| B9IIM3 Predicted protein | 648 | 1e-065 |
| B9H9A4 Predicted protein | 632 | 9e-064 |
| O24005 Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase | 605 | 1e-060 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G06340.1 ATNUDX27 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 27); bis(5'-adenosyl)-pentaphosphatase/ bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) | 1004 | 4e-109 |
| AT3G10620.1 ATNUDX26 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 26); bis(5'-adenosyl)-pentaphosphatase/ bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) | 590 | 4e-061 |
| AT1G30110.1 ATNUDX25 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 25); bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) | 466 | 9e-047 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
