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Information for unigene UN14197
| FASTA Sequence |
| Unigene ID: UN14197 | Length: 1677 |
| SNP | GGGGGGGGGGACACCATTCCCACTCAAATCACAATTTGATCACCACCAACACACTGCCAACCAAACACAAAAAGACATGTCTCTTC
TCGTTTTCTTCCTCTTCACCATCCTTGTCTTTTCAAGTTCATCTTGCTCCGCGACTCGGTTCCAGCATCAGCATAGGTACATGCAG
AGGAAAATAACGCTAGACTTGCCAAGCAAGATTGGCATCAACTACGGTAGACAAGGAAACAACCTTCCATCTCCATACCAATCCAT
CAACTTCATCAAATCTATCAAAGCTGGTCATGTCAAGCTCTACGACGCGGATCCAGAGAGTCTAACACTCCTCTCTCAAACCAATC
TTTACGTCACCATAACCGTTCCAAACCACCTAATCACTTCCATCAGCACCAACCAAACCACAGCTGAAGATTGGGTCCAAACCAAC
ATCATCCCTTACTACCCACAAACCCATATCCGGTTTGTCCTTGTCGGAAACGAAATCCTCTCCGTCGAAGACAGAATGAACATAAC
AGCAAGCGTCGTACCGGCCATGCGCAAAATAGTGACTTCTCTAAGAGCACATGGCATTCACAACATCAAAGTCGGGACAGCTTTAG
ATATGGATTCTCTCCGATCAACGTTTCCGCCGTCGAACTCAACTTTCCGGGAAGATATCGCCGAATCGTTGATGTTTCCGTTGCTA
AAGTTTCTCAACGGAACGAACTCTTACTTCTTTATCAACCTTCATCCTTACTTGCGTTGGTCAAGAAACCCTATGAACACGAGTTT
GGATTATGCTCTGTTTCAAGGAAACTCAACTTATACCGATCCTCAAACCGGTTTGGTTTACCGTAATCTTCTAGACCAAATGTTGG
ATTCGGTTATCTTCGCCATGACCAAACTCGGTTACCCACACATTCGCGTCGCAATTTCCGAAACCGGATGGCCTAACTCCGGGGAC
ATCGACGAAACCGGCGCCAACATACTCAACGCAGCGACGTATAACCGGAATTTGATCAAGAAGATGACCGCAATTCCACCAATCGG
TACACCAGCTAGACCCGGTTTAGCTATACCGACATTTGTTTTCTCCTTGTTCGACGAAAACCATAAATCCGGTTCGGGAACACAGA
GACATTATGGAGTCCTGCATCCGAACGGGACACCGATTTACGAAATTGATTTCACGGGTTCAAAACCCTTAACCGGATTCAACCCA
TTGCCTAAACCGACGAACAATGTTCCATACAAGGGTATAGTGTGGTGCGTACCGGTGGAAGGAGCTAGCGAGGCTCAGCTTGAGGA
AGCTTTGAGGATGGCTTGTGGCCGAGGCAACACGACGTGTGCGGCTTTGGCTCCGGGAAGAGAATGTTACGAGCCGGTCACTGTTT
ATTGGCATGCAAGCTATGCGGTTAGCTCGTACTGGGCTGAGTTTCGTACCGATAACGTTAGATGTTACTTCAATGGACTGGCTCGA
ATGACCACGGTCAACCCTGGACACGATCGCTGCAAGTTTCCAGGCGTTACTCTTTGAGAAAAAGAAGACTGAAAGAGATTGAAGAA
TGATTAAGGCTGCCTTATTCGTATTTATCCAATGTTGTTTTTCATTATACATTTTCTGCCTTTTATATTGTTTCGCAATGTCGAGA
AAAAAAAATCAAATAATTATAAATTTTAACTGAGTAGACATCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAA49513 beta-1,3-glucanase homologue [Brassica napus] | 2154 | 9e-240 |
| XP_002868315 hypothetical protein ARALYDRAFT_493503 [Arabidopsis lyrata subsp. lyrata] | 2153 | 1e-239 |
| NP_193144 putative glucan endo-1,3-beta-glucosidase A6 [Arabidopsis thaliana] | 2133 | 2e-237 |
| BAG16366 tapetum-specific protein A6 family protein [Brassica rapa var. perviridis] | 1834 | 1e-202 |
| BAG16359 tapetum-specific protein A6 family protein [Brassica oleracea var. italica] | 1832 | 2e-202 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q06915 Probable glucan endo-1,3-beta-glucosidase A6 | 2133 | 1e-238 |
| Q9FJU9 Glucan endo-1,3-beta-glucosidase 13 | 805 | 1e-084 |
| Q8VYE5 Glucan endo-1,3-beta-glucosidase 12 | 634 | 7e-065 |
| Q8L868 Glucan endo-1,3-beta-glucosidase 11 | 631 | 1e-064 |
| Q9ZQG9 Glucan endo-1,3-beta-glucosidase 14 | 608 | 7e-062 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q06376 Beta-1,3-glucanase homologue (Fragment) | 2154 | 6e-240 |
| B1Q397 Tapetum-specific protein A6 family protein (Fragment) | 1838 | 3e-203 |
| B1Q390 Tapetum-specific protein A6 family protein (Fragment) | 1832 | 1e-202 |
| Q8LBY4 Beta-1,3-glucanase, putative | 1783 | 6e-197 |
| A0MEX9 Putative uncharacterized protein (Fragment) | 1774 | 7e-196 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G14080.1 MEE48 (maternal effect embryo arrest 48); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | 2134 | 7e-240 |
| AT3G23770.1 glycosyl hydrolase family 17 protein | 1775 | 3e-198 |
| AT3G07320.1 glycosyl hydrolase family 17 protein | 1268 | 2e-139 |
| AT4G26830.1 catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | 817 | 3e-087 |
| AT5G56590.1 glycosyl hydrolase family 17 protein | 805 | 8e-086 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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