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Information for unigene UN14231
| FASTA Sequence |
| Unigene ID: UN14231 | Length: 1137 |
SSR | SNP | TTTTTTTCGGACACAAACTAGAGAAGTCTTCTTCGAATCAGAGAGATTCTATCCCTTAATTAGAGATCCGGAAGTTCCTTGGTGAG
AGAAGATGACAGTGATCGACATTCTGACCAGAGTTGACACGATCTGCAAGAAGTACGACAAGTACGACGTCGACAAACAGCGCGAG
TCCAACATCTCCGGCGATGACGCTTTCGCTCGTCTCTACGGAGCTTTCGAGACCCAAATCGAGACAGCTCTCGAGAAAGCTGAGAT
TGTTACCAAGGAGAAGAACAGAGCTTCTGCTGTTGCGATGAACGCTGAGATCCGTCGCACAAAGGCTAGATTGTCTGAGGAAGTTC
CCAAGCTGCAGAGACTTGCTCTCAAGCGGGTAAAGGGCCTTACAACGGAAGAGCTTGCTGCGAGAAACGATTTGGTGCTTGCGCTT
CCGGCGAGGATCGAAGCTATACCTGATGGGACAGCGGGTGGTCCTAAAAGCACTACTAGTGCTTGGGCTCCTTCTACAACCTCTCG
TCCTGATATCAAGTTTGATTCAGATGGGCGTTTTGATGATGATTACTTTCAAGAGTCGCATGAATCCAGCCAGTTCAAACAGGAGT
TTGAGATGCGCAAAATTAAGCAGGACCAAGGTCTGGACATGATCTCCGAAGGTCTAGATGCTTTGAAGAACATGGCGTCTGATATG
AACGAGGAGCTGGACCGTCAAGTTCCTCTGATGGATGAAATAGACTCAAAGGTTGACAGAGCAACCTCGGATCTTAAGAACACCAA
TGTTAGACTCAAAGATACTGTGAACCAGCTGAGATCAAGCCGGAACTTCTGCATCGATATTGTTCTGTTGTGTATTGTTCTGGGTA
TCGCTGCATACTTGTACAATGTACTGAAGTGATGAGATGAACAGGAAGGGACCCATCACTACTCTCTCTTGCCATCATGCTATTAA
AGTTTCTTACCCGAGTCAGTTTGTGTGTGTGTGTGTTTGTGTGCCTGTTTCTGGCGGTATTTGTGTGATCTTTTGACGAGAGTTTC
TTCTAAGTGTCAAGACTGTTCAAGTTGTTTCTTCTATTGAGTTATTTCCATGTTGTTCATGTCCATTACATGATGAATATATATAT
TCTCCTTCCCGAATTTACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566354 syntaxin-71 [Arabidopsis thaliana] | 1265 | 6e-137 |
| XP_002882636 hypothetical protein ARALYDRAFT_897138 [Arabidopsis lyrata subsp. lyrata] | 1265 | 6e-137 |
| XP_002280272 PREDICTED: hypothetical protein [Vitis vinifera] | 1076 | 5e-115 |
| XP_002519551 syntaxin, putative [Ricinus communis] | 1069 | 3e-114 |
| XP_002322868 predicted protein [Populus trichocarpa] | 1043 | 3e-111 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2HIU8 At3g09740 | 1265 | 4e-137 |
| B9S0N2 Syntaxin, putative | 1069 | 2e-114 |
| B9IJ24 Predicted protein | 1043 | 2e-111 |
| C0L7E7 Syntaxin-71 | 1022 | 6e-109 |
| C6TKX1 Putative uncharacterized protein | 1020 | 1e-108 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G09740.1 SYP71 (SYNTAXIN OF PLANTS 71); protein transporter | 1266 | 2e-139 |
| AT3G45280.1 SYP72 (SYNTAXIN OF PLANTS 72); protein transporter | 889 | 9e-096 |
| AT3G61450.1 SYP73 (SYNTAXIN OF PLANTS 73); protein transporter | 857 | 5e-092 |
| AT5G61210.1 SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33); SNAP receptor/ protein binding | 119 | 2e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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